RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 A0A1W2PNR3 127 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 METTL21EPA6NDL7 271 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 ZNF208O43345 1280 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 ATG12O94817 140 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 WDPCPO95876 746 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 IL2RAP01589 272 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 FOXF1Q12946 379 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 PLEKHN1Q494U1 663 aaPredicted RBP14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 TMEM104Q8NE00 496 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 OR5AP2Q8NGF4 316 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 DCUN1D4Q92564 292 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 MEGF11A6BM72 1044 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 NPIPA5E9PKD4 350 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 ADAM10O14672 748 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 ISG15P05161 165 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 QRFPP83859 136 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 TLE3Q04726 772 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 RHBDD2Q6NTF9 364 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 OR10G3Q8NGC4 313 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 TMED6Q8WW62 240 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 ASB10Q8WXI3 467 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 ZNF768Q9H5H4 540 aaKnown RBP14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 SLC2A8Q9NY64 477 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 NPIPA1Q9UND3 350 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 A0A0A6YYD4 124 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 TMEM200CA6NKL6 621 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 ADAP1O75689 374 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 PABPC1L2AQ5JQF8 200 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 TMEM200AQ86VY9 491 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 LDLRAD3Q86YD5 345 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 OR10S1Q8NGN2 331 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 FOXRED1Q96CU9 486 aaPredicted RBP14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 CHMP1AQ9HD42 196 aaPredicted RBP14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 FAM206AQ9NX38 181 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 PPP4R1LQ9P1A2 415 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 RAB22AQ9UL26 194 aa14.42□□□□□ -0.1
NKX3-1-201ENST00000380871 IGHV5-10-1A0A0J9YXX1 117 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 A0A1B0GW55 424 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 MSGN1A6NI15 193 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 NDUFA2O43678 99 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 DUX4L2P0CJ85 424 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 DUX4L3P0CJ86 424 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 DUX4L4P0CJ87 422 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 DUX4L5P0CJ88 424 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 DUX4L6P0CJ89 424 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 DUX4L7P0CJ90 424 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 NPY4RP50391 375 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 DCDP81605 110 aaKnown RBP14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 AWAT2Q6E213 333 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 BANF2Q9H503 90 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 SEC61A2Q9H9S3 476 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 DUX4Q9UBX2 424 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 SRPK3Q9UPE1 567 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 H0YIZ8 118 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 SYT7O43581 403 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 IGHMP01871 453 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 ABOP16442 354 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 RAB3AP20336 220 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 EPHA8P29322 1005 aaPredicted RBP14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 ACY1Q03154 408 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 SLC9A3R2Q15599 337 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 WDR74Q6RFH5 385 aaPredicted RBP14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 ZNF704Q6ZNC4 412 aaPredicted RBP14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 ANGPTL5Q86XS5 388 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 ARMC10Q8N2F6 343 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 JSRP1Q96MG2 331 aaPredicted RBP14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 PCED1AQ9H1Q7 454 aa14.41□□□□□ -0.1
NKX3-1-201ENST00000380871 TMEM218A2RU14 115 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 CRHP06850 196 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 ZNF101Q8IZC7 436 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 NKAIN3Q8N8D7 197 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 ZSCAN4Q8NAM6 433 aaPredicted RBP14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 OR1M1Q8NGA1 313 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 OR4K17Q8NGC6 315 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 OR10Z1Q8NGY1 313 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 OR51E1Q8TCB6 317 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 C11orf40Q8WZ69 217 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 SLAMF6Q96DU3 332 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 PURGQ9UJV8 347 aaKnown RBP14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 AHCTF1Q8WYP5 2266 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 A0A0A6YYH2 397 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 A0A1W2PQD3 144 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 A6NJ64 397 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 IFNA6P05013 189 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 MICBQ29980 383 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 TMEM244Q5VVB8 128 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 PLPP5Q8NEB5 264 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 PIK3IP1Q96FE7 263 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 KCNK17Q96T54 332 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 RNF126Q9BV68 326 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 PBOV1Q9GZY1 135 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 PIGMQ9H3S5 423 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 KNTC1P50748 2209 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 SOCS1O15524 211 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 CLDN6P56747 220 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 PLAC9Q5JTB6 97 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 COMMD2Q86X83 199 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 RNF133Q8WVZ7 376 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 TMEM234Q8WY98 164 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 CHRNA10Q9GZZ6 450 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms