RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 MSRB3Q8IXL7 192 aa14.48□□□□□ -0.09
COL2A1-202ENST00000380518 DND1Q8IYX4 353 aaKnown RBP14.48□□□□□ -0.09
COL2A1-202ENST00000380518 CIB3Q96Q77 187 aaPredicted RBP14.48□□□□□ -0.09
COL2A1-202ENST00000380518 IGHV3-15A0A0B4J1V0 119 aa14.48□□□□□ -0.09
COL2A1-202ENST00000380518 A0A0B4J2E0 115 aa14.48□□□□□ -0.09
COL2A1-202ENST00000380518 IGHV3-64DA0A0J9YX35 117 aa14.48□□□□□ -0.09
COL2A1-202ENST00000380518 ZNF816-ZNF321PA0A0X1KG74 233 aa14.48□□□□□ -0.09
COL2A1-202ENST00000380518 A0A1B0GX12 115 aa14.48□□□□□ -0.09
COL2A1-202ENST00000380518 ATP6V1G2-DDX39BF2Z307 99 aa14.48□□□□□ -0.09
COL2A1-202ENST00000380518 PDGFBP01127 241 aaPredicted RBP14.48□□□□□ -0.09
COL2A1-202ENST00000380518 PIGPP57054 158 aa14.48□□□□□ -0.09
COL2A1-202ENST00000380518 TAS2R45P59539 299 aa14.48□□□□□ -0.09
COL2A1-202ENST00000380518 OSR2Q8N2R0 312 aa14.48□□□□□ -0.09
COL2A1-202ENST00000380518 KDF1Q8NAX2 398 aaPredicted RBP14.48□□□□□ -0.09
COL2A1-202ENST00000380518 TRIB1Q96RU8 372 aa14.48□□□□□ -0.09
COL2A1-202ENST00000380518 SIRT5Q9NXA8 310 aa14.48□□□□□ -0.09
COL2A1-202ENST00000380518 OR6C68A6NDL8 312 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 ZNF727A8MUV8 499 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 METTL15P1P0C7V9 234 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 WNT3P56703 355 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 OR2B11Q5JQS5 317 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 SSX9Q7RTT3 188 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 TMEM123Q8N131 208 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 ARRDC1Q8N5I2 433 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 RELL2Q8NC24 303 aaPredicted RBP14.47□□□□□ -0.09
COL2A1-202ENST00000380518 DEFB108BQ8NET1 73 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 OR2V1Q8NHB1 315 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 CMTM3Q96MX0 182 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 LRRC61Q9BV99 259 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 NUDT9Q9BW91 350 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 ACTR3CQ9C0K3 210 aaPredicted RBP14.47□□□□□ -0.09
COL2A1-202ENST00000380518 OCEL1Q9H607 264 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 LAMA4Q16363 1823 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 TNFSF11O14788 317 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 ZNF718Q3SXZ3 478 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 ANKRD16Q6P6B7 361 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 TMEM229BQ8NBD8 167 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 PPP1R1CQ8WVI7 109 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 OPA3Q9H6K4 179 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 LAMP3Q9UQV4 416 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 DDX60LQ5H9U9 1706 aaKnown RBP14.47□□□□□ -0.09
COL2A1-202ENST00000380518 OR2W5A6NFC9 320 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 AQP7O14520 342 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 GALR2O43603 387 aaPredicted RBP14.47□□□□□ -0.09
COL2A1-202ENST00000380518 MBP02144 154 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 SLC25A1P53007 311 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 RTL8BQ17RB0 113 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 NOXO1Q8NFA2 376 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 GINS3Q9BRX5 216 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 SLIRPQ9GZT3 109 aaKnown RBP14.47□□□□□ -0.09
COL2A1-202ENST00000380518 MTCH1Q9NZJ7 389 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 TUBAL3A6NHL2 446 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 FIGNL2A6NMB9 653 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 GABRG2P18507 467 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 THBS4P35443 961 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 UBE2IP63279 158 aaKnown RBP14.47□□□□□ -0.09
COL2A1-202ENST00000380518 RAE1P78406 368 aaKnown RBP14.47□□□□□ -0.09
COL2A1-202ENST00000380518 ENDOGQ14249 297 aaKnown RBP14.47□□□□□ -0.09
COL2A1-202ENST00000380518 ZNF705AQ6ZN79 300 aaPredicted RBP14.47□□□□□ -0.09
COL2A1-202ENST00000380518 UBALD2Q8IYN6 164 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 TCTE3Q8IZS6 198 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 GPR119Q8TDV5 335 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 MMP25Q9NPA2 562 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 TRAPPC4Q9Y296 219 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 TOGARAM1Q9Y4F4 1720 aa14.47□□□□□ -0.09
COL2A1-202ENST00000380518 TRPM3Q9HCF6 1732 aaPredicted RBP14.46□□□□□ -0.09
COL2A1-202ENST00000380518 TMEM11P17152 192 aa14.46□□□□□ -0.09
COL2A1-202ENST00000380518 METAP1P53582 386 aa14.46□□□□□ -0.09
COL2A1-202ENST00000380518 CDK5Q00535 292 aa14.46□□□□□ -0.09
COL2A1-202ENST00000380518 LINC00303Q3SY05 128 aa14.46□□□□□ -0.09
COL2A1-202ENST00000380518 RPUSD3Q6P087 351 aaKnown RBP14.46□□□□□ -0.09
COL2A1-202ENST00000380518 LIMS2Q7Z4I7 341 aa14.46□□□□□ -0.09
COL2A1-202ENST00000380518 KTI12Q96EK9 354 aaPredicted RBP14.46□□□□□ -0.09
COL2A1-202ENST00000380518 WDR89Q96FK6 387 aaPredicted RBP14.46□□□□□ -0.09
COL2A1-202ENST00000380518 DCTN6O00399 190 aa14.46□□□□□ -0.09
COL2A1-202ENST00000380518 HEXAP06865 529 aa14.46□□□□□ -0.09
COL2A1-202ENST00000380518 FAM157BP0CG42 384 aa14.46□□□□□ -0.09
COL2A1-202ENST00000380518 FUT6P51993 359 aa14.46□□□□□ -0.09
COL2A1-202ENST00000380518 ZNF793Q6ZN11 406 aa14.46□□□□□ -0.09
COL2A1-202ENST00000380518 FAM58AQ8N1B3 248 aa14.46□□□□□ -0.09
COL2A1-202ENST00000380518 EDARADDQ8WWZ3 215 aa14.46□□□□□ -0.09
COL2A1-202ENST00000380518 ZPBPQ9BS86 351 aa14.46□□□□□ -0.09
COL2A1-202ENST00000380518 LRP5O75197 1615 aa14.46□□□□□ -0.09
COL2A1-202ENST00000380518 TRIM77I1YAP6 450 aa14.46□□□□□ -0.09
COL2A1-202ENST00000380518 AKR7A2O43488 359 aa14.46□□□□□ -0.09
COL2A1-202ENST00000380518 FAHP16930 419 aa14.46□□□□□ -0.09
COL2A1-202ENST00000380518 ACOT6Q3I5F7 207 aaPredicted RBP14.46□□□□□ -0.09
COL2A1-202ENST00000380518 DBX2Q6ZNG2 339 aa14.46□□□□□ -0.09
COL2A1-202ENST00000380518 ATP23Q9Y6H3 246 aa14.46□□□□□ -0.09
COL2A1-202ENST00000380518 TERTO14746 1132 aaKnown RBP14.46□□□□□ -0.1
COL2A1-202ENST00000380518 CT45A10P0DMU9 189 aa14.46□□□□□ -0.1
COL2A1-202ENST00000380518 GALP22466 123 aa14.46□□□□□ -0.1
COL2A1-202ENST00000380518 DSCR4P56555 118 aaPredicted RBP14.46□□□□□ -0.1
COL2A1-202ENST00000380518 TIGITQ495A1 244 aa14.46□□□□□ -0.1
COL2A1-202ENST00000380518 ZNF321PQ8N8H1 164 aa14.46□□□□□ -0.1
COL2A1-202ENST00000380518 OR5M8Q8NGP6 311 aa14.46□□□□□ -0.1
COL2A1-202ENST00000380518 TECTBQ96PL2 329 aa14.46□□□□□ -0.1
COL2A1-202ENST00000380518 PCED1AQ9H1Q7 454 aa14.46□□□□□ -0.1
COL2A1-202ENST00000380518 CACFD1Q9UGQ2 172 aa14.46□□□□□ -0.1
COL2A1-202ENST00000380518 ARPC3O15145 178 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms