RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 GHRLQ9UBU3 117 aa20.33■□□□□ 0.85
VPS16-201ENST00000380443 FLVCR2Q9UPI3 526 aa20.33■□□□□ 0.85
VPS16-201ENST00000380443 DCHS1Q96JQ0 3298 aa20.33■□□□□ 0.84
VPS16-201ENST00000380443 PCSK5Q92824 1860 aa20.32■□□□□ 0.84
VPS16-201ENST00000380443 TMEM14DPA8MWL7 114 aa20.32■□□□□ 0.84
VPS16-201ENST00000380443 MTRF1O75570 445 aaKnown RBP20.32■□□□□ 0.84
VPS16-201ENST00000380443 SNAPC5O75971 98 aa20.32■□□□□ 0.84
VPS16-201ENST00000380443 GUCA2AQ02747 115 aa20.32■□□□□ 0.84
VPS16-201ENST00000380443 RAB35Q15286 201 aa20.32■□□□□ 0.84
VPS16-201ENST00000380443 OR5AS1Q8N127 324 aa20.32■□□□□ 0.84
VPS16-201ENST00000380443 GABRG1Q8N1C3 465 aa20.32■□□□□ 0.84
VPS16-201ENST00000380443 OR52H1Q8NGJ2 320 aa20.32■□□□□ 0.84
VPS16-201ENST00000380443 ZNF319Q9P2F9 582 aa20.32■□□□□ 0.84
VPS16-201ENST00000380443 SCP2D1Q9UJQ7 156 aa20.32■□□□□ 0.84
VPS16-201ENST00000380443 CREBL2O60519 120 aaPredicted RBP20.32■□□□□ 0.84
VPS16-201ENST00000380443 TNFSF15O95150 251 aa20.32■□□□□ 0.84
VPS16-201ENST00000380443 SCRN3Q0VDG4 424 aa20.32■□□□□ 0.84
VPS16-201ENST00000380443 DHRS13Q6UX07 377 aa20.32■□□□□ 0.84
VPS16-201ENST00000380443 SEZ6L2Q6UXD5 910 aa20.32■□□□□ 0.84
VPS16-201ENST00000380443 PP6455Q8WZ26 134 aa20.32■□□□□ 0.84
VPS16-201ENST00000380443 FAM71F1Q96KD3 344 aaPredicted RBP20.32■□□□□ 0.84
VPS16-201ENST00000380443 ALX4Q9H161 411 aaPredicted RBP20.32■□□□□ 0.84
VPS16-201ENST00000380443 V9GYS6 101 aa20.32■□□□□ 0.84
VPS16-201ENST00000380443 RAB27BO00194 218 aa20.31■□□□□ 0.84
VPS16-201ENST00000380443 HPXP02790 462 aa20.31■□□□□ 0.84
VPS16-201ENST00000380443 SLC2A1P11166 492 aa20.31■□□□□ 0.84
VPS16-201ENST00000380443 PRF1P14222 555 aa20.31■□□□□ 0.84
VPS16-201ENST00000380443 ABOP16442 354 aa20.31■□□□□ 0.84
VPS16-201ENST00000380443 STK11Q15831 433 aa20.31■□□□□ 0.84
VPS16-201ENST00000380443 ZNF260Q3ZCT1 412 aa20.31■□□□□ 0.84
VPS16-201ENST00000380443 AWAT2Q6E213 333 aa20.31■□□□□ 0.84
VPS16-201ENST00000380443 SPINK14Q6IE38 97 aa20.31■□□□□ 0.84
VPS16-201ENST00000380443 DRAM2Q6UX65 266 aa20.31■□□□□ 0.84
VPS16-201ENST00000380443 UTS2BQ765I0 119 aa20.31■□□□□ 0.84
VPS16-201ENST00000380443 ANGPTL5Q86XS5 388 aa20.31■□□□□ 0.84
VPS16-201ENST00000380443 PAQR4Q8N4S7 273 aaPredicted RBP20.31■□□□□ 0.84
VPS16-201ENST00000380443 KCNG3Q8TAE7 436 aa20.31■□□□□ 0.84
VPS16-201ENST00000380443 SLC25A21Q9BQT8 299 aaPredicted RBP20.31■□□□□ 0.84
VPS16-201ENST00000380443 GINS4Q9BRT9 223 aa20.31■□□□□ 0.84
VPS16-201ENST00000380443 TMEM38BQ9NVV0 291 aa20.31■□□□□ 0.84
VPS16-201ENST00000380443 PINLYPA6NC86 204 aa20.3■□□□□ 0.84
VPS16-201ENST00000380443 DHRS7CA6NNS2 312 aa20.3■□□□□ 0.84
VPS16-201ENST00000380443 M0R135 149 aa20.3■□□□□ 0.84
VPS16-201ENST00000380443 DHRS3O75911 302 aa20.3■□□□□ 0.84
VPS16-201ENST00000380443 CYB5AP00167 134 aa20.3■□□□□ 0.84
VPS16-201ENST00000380443 CD74P04233 296 aa20.3■□□□□ 0.84
VPS16-201ENST00000380443 GSTT2P0CG29 244 aa20.3■□□□□ 0.84
VPS16-201ENST00000380443 VSIG8P0DPA2 414 aa20.3■□□□□ 0.84
VPS16-201ENST00000380443 CD82P27701 267 aa20.3■□□□□ 0.84
VPS16-201ENST00000380443 PCBD1P61457 104 aa20.3■□□□□ 0.84
VPS16-201ENST00000380443 NRN1LQ496H8 165 aa20.3■□□□□ 0.84
VPS16-201ENST00000380443 ZNF626Q68DY1 528 aa20.3■□□□□ 0.84
VPS16-201ENST00000380443 MEIOBQ8N635 442 aa20.3■□□□□ 0.84
VPS16-201ENST00000380443 BEST4Q8NFU0 473 aa20.3■□□□□ 0.84
VPS16-201ENST00000380443 ZNF799Q96GE5 643 aa20.3■□□□□ 0.84
VPS16-201ENST00000380443 OR10A2Q9H208 303 aa20.3■□□□□ 0.84
VPS16-201ENST00000380443 ZNF703Q9H7S9 590 aaPredicted RBP20.3■□□□□ 0.84
VPS16-201ENST00000380443 PLEK2Q9NYT0 353 aa20.3■□□□□ 0.84
VPS16-201ENST00000380443 CD3DP04234 171 aa20.3■□□□□ 0.84
VPS16-201ENST00000380443 ITGA3P26006 1051 aa20.3■□□□□ 0.84
VPS16-201ENST00000380443 RAD52P43351 418 aa20.3■□□□□ 0.84
VPS16-201ENST00000380443 MEF2DQ14814 521 aa20.3■□□□□ 0.84
VPS16-201ENST00000380443 LRRC18Q8N456 261 aa20.3■□□□□ 0.84
VPS16-201ENST00000380443 SSC4DQ8WTU2 575 aa20.3■□□□□ 0.84
VPS16-201ENST00000380443 ZNF436Q9C0F3 470 aaPredicted RBP20.3■□□□□ 0.84
VPS16-201ENST00000380443 PLSCR3Q9NRY6 295 aa20.3■□□□□ 0.84
VPS16-201ENST00000380443 MRPS28Q9Y2Q9 187 aaKnown RBP20.3■□□□□ 0.84
VPS16-201ENST00000380443 IGKV3D-15A0A087WSY6 115 aa20.29■□□□□ 0.84
VPS16-201ENST00000380443 SPAARA0A1B0GVQ0 90 aa20.29■□□□□ 0.84
VPS16-201ENST00000380443 OR5H15A6NDH6 313 aa20.29■□□□□ 0.84
VPS16-201ENST00000380443 F5H5K5 113 aa20.29■□□□□ 0.84
VPS16-201ENST00000380443 RAB3DO95716 219 aa20.29■□□□□ 0.84
VPS16-201ENST00000380443 CXCL3P19876 107 aa20.29■□□□□ 0.84
VPS16-201ENST00000380443 ALDH3B1P43353 468 aa20.29■□□□□ 0.84
VPS16-201ENST00000380443 STARP49675 285 aa20.29■□□□□ 0.84
VPS16-201ENST00000380443 RIPPLY1Q0D2K3 151 aa20.29■□□□□ 0.84
VPS16-201ENST00000380443 UNC119Q13432 240 aa20.29■□□□□ 0.84
VPS16-201ENST00000380443 ZMYND11Q15326 602 aa20.29■□□□□ 0.84
VPS16-201ENST00000380443 OR1C1Q15619 314 aa20.29■□□□□ 0.84
VPS16-201ENST00000380443 OR10K2Q6IF99 312 aa20.29■□□□□ 0.84
VPS16-201ENST00000380443 FAAP20Q6NZ36 180 aa20.29■□□□□ 0.84
VPS16-201ENST00000380443 FAM109AQ8N4B1 249 aa20.29■□□□□ 0.84
VPS16-201ENST00000380443 PNLDC1Q8NA58 520 aaKnown RBP20.29■□□□□ 0.84
VPS16-201ENST00000380443 ROBO4Q8WZ75 1007 aa20.29■□□□□ 0.84
VPS16-201ENST00000380443 NKX3-1Q99801 234 aaPredicted RBP20.29■□□□□ 0.84
VPS16-201ENST00000380443 ZNF391Q9UJN7 358 aa20.29■□□□□ 0.84
VPS16-201ENST00000380443 BOLA1Q9Y3E2 137 aa20.29■□□□□ 0.84
VPS16-201ENST00000380443 UBE2QL1A1L167 161 aa20.28■□□□□ 0.84
VPS16-201ENST00000380443 SGCEO43556 437 aa20.28■□□□□ 0.84
VPS16-201ENST00000380443 HCKP08631 526 aa20.28■□□□□ 0.84
VPS16-201ENST00000380443 SLC6A9P48067 706 aa20.28■□□□□ 0.84
VPS16-201ENST00000380443 CLDN15P56746 228 aa20.28■□□□□ 0.84
VPS16-201ENST00000380443 RSPO1Q2MKA7 263 aaPredicted RBP20.28■□□□□ 0.84
VPS16-201ENST00000380443 SLC36A1Q7Z2H8 476 aa20.28■□□□□ 0.84
VPS16-201ENST00000380443 ZNF584Q8IVC4 421 aa20.28■□□□□ 0.84
VPS16-201ENST00000380443 CCDC107Q8WV48 283 aa20.28■□□□□ 0.84
VPS16-201ENST00000380443 FBXO17Q96EF6 278 aa20.28■□□□□ 0.84
VPS16-201ENST00000380443 RADILQ96JH8 1075 aa20.28■□□□□ 0.84
VPS16-201ENST00000380443 CRLF2Q9HC73 371 aa20.28■□□□□ 0.84
VPS16-201ENST00000380443 MYOZ1Q9NP98 299 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 212 ms