RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 SCRT1Q9BWW7 348 aa7.31□□□□□ -1.24
PTPRR-203ENST00000378778 KCNJ16Q9NPI9 418 aa7.31□□□□□ -1.24
PTPRR-203ENST00000378778 GFOD1Q9NXC2 390 aa7.31□□□□□ -1.24
PTPRR-203ENST00000378778 NSG2Q9Y328 171 aa7.31□□□□□ -1.24
PTPRR-203ENST00000378778 CPAMD8Q8IZJ3 1885 aa7.31□□□□□ -1.24
PTPRR-203ENST00000378778 PDE4DIPQ5VU43 2346 aa7.31□□□□□ -1.24
PTPRR-203ENST00000378778 WIPF3A6NGB9 483 aa7.31□□□□□ -1.24
PTPRR-203ENST00000378778 ST8SIA5O15466 376 aa7.31□□□□□ -1.24
PTPRR-203ENST00000378778 LATO43561 262 aa7.31□□□□□ -1.24
PTPRR-203ENST00000378778 TIMP1P01033 207 aa7.31□□□□□ -1.24
PTPRR-203ENST00000378778 IFNA2P01563 188 aa7.31□□□□□ -1.24
PTPRR-203ENST00000378778 CSN2P05814 226 aa7.31□□□□□ -1.24
PTPRR-203ENST00000378778 PGCP20142 388 aa7.31□□□□□ -1.24
PTPRR-203ENST00000378778 RBMXP38159 391 aaKnown RBP7.31□□□□□ -1.24
PTPRR-203ENST00000378778 LBX1P52954 281 aa7.31□□□□□ -1.24
PTPRR-203ENST00000378778 ACER2Q5QJU3 275 aa7.31□□□□□ -1.24
PTPRR-203ENST00000378778 HIST2H3PS2Q5TEC6 136 aa7.31□□□□□ -1.24
PTPRR-203ENST00000378778 C9orf40Q8IXQ3 194 aa7.31□□□□□ -1.24
PTPRR-203ENST00000378778 C16orf52Q8NHV5 167 aa7.31□□□□□ -1.24
PTPRR-203ENST00000378778 FAM3CQ92520 227 aa7.31□□□□□ -1.24
PTPRR-203ENST00000378778 NTNG2Q96CW9 530 aa7.31□□□□□ -1.24
PTPRR-203ENST00000378778 WDR92Q96MX6 357 aa7.31□□□□□ -1.24
PTPRR-203ENST00000378778 RTBDNQ9BSG5 229 aaPredicted RBP7.31□□□□□ -1.24
PTPRR-203ENST00000378778 CHST5Q9GZS9 411 aa7.31□□□□□ -1.24
PTPRR-203ENST00000378778 OR2S2Q9NQN1 319 aa7.31□□□□□ -1.24
PTPRR-203ENST00000378778 PRTFDC1Q9NRG1 225 aa7.31□□□□□ -1.24
PTPRR-203ENST00000378778 GAR1Q9NY12 217 aaKnown RBP7.31□□□□□ -1.24
PTPRR-203ENST00000378778 MRPS2Q9Y399 296 aaKnown RBP7.31□□□□□ -1.24
PTPRR-203ENST00000378778 A0A1W2PQU0 124 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 FRG2CA6NGY1 282 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 B4DEV8 164 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 UMAD1C9J7I0 102 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 RPL36A-HNRNPH2H7BZ11 118 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 M0R036 132 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 ADAM10O14672 748 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 TXNL1O43396 289 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 SLC16A7O60669 478 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 PMP2P02689 132 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 SNRNP70P08621 437 aaKnown RBP7.3□□□□□ -1.24
PTPRR-203ENST00000378778 ZNF708P17019 499 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 FCGR2CP31995 323 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 ALDH3B1P43353 468 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 P2RY1P47900 373 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 RGS19P49795 217 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 RBP2P50120 134 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 EMP2P54851 167 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 SUPT4H1P63272 117 aaKnown RBP7.3□□□□□ -1.24
PTPRR-203ENST00000378778 INSM1Q01101 510 aaPredicted RBP7.3□□□□□ -1.24
PTPRR-203ENST00000378778 ACKR1Q16570 336 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 ODF4Q2M2E3 257 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 KRBOX4Q5JUW0 171 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 KLHL24Q6TFL4 600 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 DGAT2L6Q6ZPD8 337 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 TMPRSS9Q7Z410 1059 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 ZNF565Q8N9K5 539 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 ZNF248Q8NDW4 579 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 FNDC9Q8TBE3 224 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 SECTM1Q8WVN6 248 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 RNF133Q8WVZ7 376 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 GTF3AQ92664 365 aaKnown RBP7.3□□□□□ -1.24
PTPRR-203ENST00000378778 WNT2BQ93097 391 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 ELSPBP1Q96BH3 223 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 MRPL38Q96DV4 380 aaKnown RBP7.3□□□□□ -1.24
PTPRR-203ENST00000378778 LRRC3BQ96PB8 259 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 TBX21Q9UL17 535 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 TMEM269A0A1B0GVZ9 245 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 A0A1W2PPH5 198 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 A6NLC8 198 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 SERPINE3A8MV23 424 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 A8MVM7 634 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 H7C1C5 153 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 GPR137BO60478 399 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 NPIPB7O75200 414 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 GPANK1O95872 356 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 SERPINA5P05154 406 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 CTSDP07339 412 aaPredicted RBP7.3□□□□□ -1.24
PTPRR-203ENST00000378778 LIPCP11150 499 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 GP1BBP13224 206 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 RPS2P15880 293 aaKnown RBP7.3□□□□□ -1.24
PTPRR-203ENST00000378778 NQO2P16083 231 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 ITGA3P26006 1051 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 OR3A2P47893 321 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 DAP3P51398 398 aaKnown RBP7.3□□□□□ -1.24
PTPRR-203ENST00000378778 POLR2HP52434 150 aaKnown RBP7.3□□□□□ -1.24
PTPRR-203ENST00000378778 CLDN6P56747 220 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 SLC26A5P58743 744 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 LCN6P62502 163 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 SLC35A1P78382 337 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 IL13RA2Q14627 380 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 EBPQ15125 230 aaKnown RBP7.3□□□□□ -1.24
PTPRR-203ENST00000378778 PRTGQ2VWP7 1150 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.3□□□□□ -1.24
PTPRR-203ENST00000378778 FAM89BQ8N5H3 189 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 GVQW1Q8N7I0 195 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 SLC26A10Q8NG04 563 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 OR5T3Q8NGG3 340 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 OR51A2Q8NGJ7 313 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 ST7LQ8TDW4 575 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 LPAR5Q9H1C0 372 aa7.3□□□□□ -1.24
PTPRR-203ENST00000378778 SPACA1Q9HBV2 294 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms