RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 RIPPLY1Q0D2K3 151 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 C20orf196Q8IYI0 205 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 ELMOD3Q96FG2 381 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 C12orf4Q9NQ89 552 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 RER1O15258 196 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 SULT1B1O43704 296 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 TSPAN9O75954 239 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 MAS1P04201 325 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 ADRA2CP18825 462 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 PSMA6P60900 246 aaKnown RBP17.12■□□□□ 0.33
SSU72-204ENST00000378726 DHODHQ02127 395 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 PLA2G7Q13093 441 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 HYAL4Q2M3T9 481 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 LRRTM1Q86UE6 522 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 SPICQ8N5J4 248 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 DNAAF1Q8NEP3 725 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 ASB5Q8WWX0 329 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 THRSPQ92748 146 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 WBP1Q96G27 269 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 ZNF416Q9BWM5 594 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 C1QTNF6Q9BXI9 259 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 ULBP2Q9BZM5 246 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 RDH8Q9NYR8 311 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 DHDHQ9UQ10 334 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 GVINP1Q7Z2Y8 2422 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 RGS11O94810 467 aa17.11■□□□□ 0.33
SSU72-204ENST00000378726 TAS2R20P59543 309 aa17.11■□□□□ 0.33
SSU72-204ENST00000378726 LSM6P62312 80 aaKnown RBP17.11■□□□□ 0.33
SSU72-204ENST00000378726 ZNF766Q5HY98 468 aa17.11■□□□□ 0.33
SSU72-204ENST00000378726 ABLIM2Q6H8Q1 611 aa17.11■□□□□ 0.33
SSU72-204ENST00000378726 RHOUQ7L0Q8 258 aa17.11■□□□□ 0.33
SSU72-204ENST00000378726 MEIOBQ8N635 442 aa17.11■□□□□ 0.33
SSU72-204ENST00000378726 RBPMSQ93062 196 aaKnown RBP17.11■□□□□ 0.33
SSU72-204ENST00000378726 HAVCR1Q96D42 359 aa17.11■□□□□ 0.33
SSU72-204ENST00000378726 NELFAQ9H3P2 528 aa17.11■□□□□ 0.33
SSU72-204ENST00000378726 ZNF878C9JN71 531 aa17.11■□□□□ 0.33
SSU72-204ENST00000378726 CYTIPO60759 359 aa17.11■□□□□ 0.33
SSU72-204ENST00000378726 MSR1P21757 451 aa17.11■□□□□ 0.33
SSU72-204ENST00000378726 ART1P52961 327 aa17.11■□□□□ 0.33
SSU72-204ENST00000378726 CLDN18P56856 261 aa17.11■□□□□ 0.33
SSU72-204ENST00000378726 SLC10A1Q14973 349 aa17.11■□□□□ 0.33
SSU72-204ENST00000378726 TAF13Q15543 124 aa17.11■□□□□ 0.33
SSU72-204ENST00000378726 NHLRC3Q5JS37 347 aa17.11■□□□□ 0.33
SSU72-204ENST00000378726 ZNF626Q68DY1 528 aa17.11■□□□□ 0.33
SSU72-204ENST00000378726 ZNF704Q6ZNC4 412 aaPredicted RBP17.11■□□□□ 0.33
SSU72-204ENST00000378726 AAED1Q7RTV5 226 aa17.11■□□□□ 0.33
SSU72-204ENST00000378726 ZFP62Q8NB50 900 aaPredicted RBP17.11■□□□□ 0.33
SSU72-204ENST00000378726 GALNT11Q8NCW6 608 aa17.11■□□□□ 0.33
SSU72-204ENST00000378726 FDCSPQ8NFU4 85 aa17.11■□□□□ 0.33
SSU72-204ENST00000378726 OR52B4Q8NGK2 314 aa17.11■□□□□ 0.33
SSU72-204ENST00000378726 FAM206AQ9NX38 181 aa17.11■□□□□ 0.33
SSU72-204ENST00000378726 HHLA2Q9UM44 414 aa17.11■□□□□ 0.33
SSU72-204ENST00000378726 ARPC4-TTLL3A0A0A6YYG9 625 aa17.1■□□□□ 0.33
SSU72-204ENST00000378726 ITGB2P05107 769 aa17.1■□□□□ 0.33
SSU72-204ENST00000378726 ISG15P05161 165 aa17.1■□□□□ 0.33
SSU72-204ENST00000378726 GIPP09681 153 aaPredicted RBP17.1■□□□□ 0.33
SSU72-204ENST00000378726 CALCBP10092 127 aa17.1■□□□□ 0.33
SSU72-204ENST00000378726 CPN1P15169 458 aa17.1■□□□□ 0.33
SSU72-204ENST00000378726 RTP5Q14D33 572 aa17.1■□□□□ 0.33
SSU72-204ENST00000378726 C3P1Q6ZMU1 363 aa17.1■□□□□ 0.33
SSU72-204ENST00000378726 ABHD3Q8WU67 409 aa17.1■□□□□ 0.33
SSU72-204ENST00000378726 RAB40AQ8WXH6 277 aa17.1■□□□□ 0.33
SSU72-204ENST00000378726 ZNF837Q96EG3 531 aaPredicted RBP17.1■□□□□ 0.33
SSU72-204ENST00000378726 PROB1E7EW31 1015 aa17.09■□□□□ 0.33
SSU72-204ENST00000378726 L7N2F9 121 aa17.09■□□□□ 0.33
SSU72-204ENST00000378726 ACOT7O00154 380 aa17.09■□□□□ 0.33
SSU72-204ENST00000378726 CREBL2O60519 120 aaPredicted RBP17.09■□□□□ 0.33
SSU72-204ENST00000378726 NDUFB6O95139 128 aa17.09■□□□□ 0.33
SSU72-204ENST00000378726 ZNF708P17019 499 aa17.09■□□□□ 0.33
SSU72-204ENST00000378726 HSD11B1P28845 292 aa17.09■□□□□ 0.33
SSU72-204ENST00000378726 ZNF84P51523 738 aa17.09■□□□□ 0.33
SSU72-204ENST00000378726 TMEM244Q5VVB8 128 aa17.09■□□□□ 0.33
SSU72-204ENST00000378726 FOXL2NBQ6ZUU3 175 aa17.09■□□□□ 0.33
SSU72-204ENST00000378726 LRRC18Q8N456 261 aa17.09■□□□□ 0.33
SSU72-204ENST00000378726 LHFPL5Q8TAF8 219 aa17.09■□□□□ 0.33
SSU72-204ENST00000378726 KIF25Q9UIL4 384 aa17.09■□□□□ 0.33
SSU72-204ENST00000378726 PTPRZ1P23471 2315 aaPredicted RBP17.09■□□□□ 0.33
SSU72-204ENST00000378726 TRIM77I1YAP6 450 aa17.09■□□□□ 0.33
SSU72-204ENST00000378726 CD2P06729 351 aa17.09■□□□□ 0.33
SSU72-204ENST00000378726 ACSM4P0C7M7 580 aa17.09■□□□□ 0.33
SSU72-204ENST00000378726 PRKXP51817 358 aa17.09■□□□□ 0.33
SSU72-204ENST00000378726 CLN3Q13286 438 aa17.09■□□□□ 0.33
SSU72-204ENST00000378726 TMEM178AQ8NBL3 297 aa17.09■□□□□ 0.33
SSU72-204ENST00000378726 NABP1Q96AH0 204 aa17.09■□□□□ 0.33
SSU72-204ENST00000378726 REG4Q9BYZ8 158 aa17.09■□□□□ 0.33
SSU72-204ENST00000378726 PBOV1Q9GZY1 135 aa17.09■□□□□ 0.33
SSU72-204ENST00000378726 PNRC2Q9NPJ4 139 aaKnown RBP17.09■□□□□ 0.33
SSU72-204ENST00000378726 KIAA1549Q9HCM3 1950 aa17.08■□□□□ 0.33
SSU72-204ENST00000378726 ANXA2P2A6NMY6 339 aa17.08■□□□□ 0.33
SSU72-204ENST00000378726 MCRIP1C9JLW8 97 aa17.08■□□□□ 0.33
SSU72-204ENST00000378726 P2RY10O00398 339 aa17.08■□□□□ 0.33
SSU72-204ENST00000378726 TMEM127O75204 238 aa17.08■□□□□ 0.33
SSU72-204ENST00000378726 OR2A4O95047 310 aa17.08■□□□□ 0.33
SSU72-204ENST00000378726 ANXA2P07355 339 aaKnown RBP17.08■□□□□ 0.33
SSU72-204ENST00000378726 VSIG10L2P0DP72 767 aa17.08■□□□□ 0.33
SSU72-204ENST00000378726 ACHEP22303 614 aa17.08■□□□□ 0.33
SSU72-204ENST00000378726 NFYAP23511 347 aaPredicted RBP17.08■□□□□ 0.33
SSU72-204ENST00000378726 TNFSF10P50591 281 aa17.08■□□□□ 0.33
SSU72-204ENST00000378726 SFRP5Q5T4F7 317 aa17.08■□□□□ 0.33
SSU72-204ENST00000378726 FAM122CQ6P4D5 195 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms