RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 A0A0C4DFX4 3053 aa16.1■□□□□ 0.17
TDP2-202ENST00000378198 VAMP1P23763 118 aa16.09■□□□□ 0.17
TDP2-202ENST00000378198 CDAP32320 146 aa16.09■□□□□ 0.17
TDP2-202ENST00000378198 ZNF121P58317 390 aaPredicted RBP16.09■□□□□ 0.17
TDP2-202ENST00000378198 ZNF239Q16600 458 aaKnown RBP16.09■□□□□ 0.17
TDP2-202ENST00000378198 ACTBL2Q562R1 376 aa16.09■□□□□ 0.17
TDP2-202ENST00000378198 PTCRAQ6ISU1 281 aaPredicted RBP16.09■□□□□ 0.17
TDP2-202ENST00000378198 NAA40Q86UY6 237 aa16.09■□□□□ 0.17
TDP2-202ENST00000378198 CASTOR1Q8WTX7 329 aa16.09■□□□□ 0.17
TDP2-202ENST00000378198 GAREM1Q9H706 876 aa16.09■□□□□ 0.17
TDP2-202ENST00000378198 GPR84Q9NQS5 396 aa16.09■□□□□ 0.17
TDP2-202ENST00000378198 RARRES3Q9UL19 164 aa16.09■□□□□ 0.17
TDP2-202ENST00000378198 A0A1W2PNR3 127 aa16.09■□□□□ 0.17
TDP2-202ENST00000378198 DBX1A6NMT0 343 aa16.09■□□□□ 0.17
TDP2-202ENST00000378198 CDC14BO60729 498 aa16.09■□□□□ 0.17
TDP2-202ENST00000378198 OR2J2O76002 312 aa16.09■□□□□ 0.17
TDP2-202ENST00000378198 MPIG6BO95866 241 aa16.09■□□□□ 0.17
TDP2-202ENST00000378198 OPN1LWP04000 364 aa16.09■□□□□ 0.17
TDP2-202ENST00000378198 PNLIPP16233 465 aa16.09■□□□□ 0.17
TDP2-202ENST00000378198 ATF4P18848 351 aaPredicted RBP16.09■□□□□ 0.17
TDP2-202ENST00000378198 CCL1P22362 96 aa16.09■□□□□ 0.17
TDP2-202ENST00000378198 FKBP2P26885 142 aaKnown RBP16.09■□□□□ 0.17
TDP2-202ENST00000378198 MFAP5Q13361 173 aa16.09■□□□□ 0.17
TDP2-202ENST00000378198 PNLIPRP3Q17RR3 467 aa16.09■□□□□ 0.17
TDP2-202ENST00000378198 KCTD9Q7L273 389 aa16.09■□□□□ 0.17
TDP2-202ENST00000378198 DOK3Q7L591 496 aa16.09■□□□□ 0.17
TDP2-202ENST00000378198 INO80EQ8NBZ0 244 aaPredicted RBP16.09■□□□□ 0.17
TDP2-202ENST00000378198 TERB2Q8NHR7 220 aa16.09■□□□□ 0.17
TDP2-202ENST00000378198 SLC25A43Q8WUT9 341 aaPredicted RBP16.09■□□□□ 0.17
TDP2-202ENST00000378198 RAB3CQ96E17 227 aa16.09■□□□□ 0.17
TDP2-202ENST00000378198 TMEM41AQ96HV5 264 aa16.09■□□□□ 0.17
TDP2-202ENST00000378198 C1orf147Q96MC9 270 aaPredicted RBP16.09■□□□□ 0.17
TDP2-202ENST00000378198 BARX1Q9HBU1 254 aaPredicted RBP16.09■□□□□ 0.17
TDP2-202ENST00000378198 A0A0A6YYD4 124 aa16.08■□□□□ 0.16
TDP2-202ENST00000378198 ONECUT2O95948 504 aa16.08■□□□□ 0.16
TDP2-202ENST00000378198 HIST1H1DP16402 221 aaKnown RBP16.08■□□□□ 0.16
TDP2-202ENST00000378198 ZNF43P17038 809 aa16.08■□□□□ 0.16
TDP2-202ENST00000378198 HIST3H3Q16695 136 aa16.08■□□□□ 0.16
TDP2-202ENST00000378198 BEX5Q5H9J7 111 aa16.08■□□□□ 0.16
TDP2-202ENST00000378198 FAM74A1Q5RGS3 127 aa16.08■□□□□ 0.16
TDP2-202ENST00000378198 VAX1Q5SQQ9 334 aa16.08■□□□□ 0.16
TDP2-202ENST00000378198 CARD17Q5XLA6 110 aa16.08■□□□□ 0.16
TDP2-202ENST00000378198 MARCH1Q8TCQ1 289 aa16.08■□□□□ 0.16
TDP2-202ENST00000378198 SPACA5Q96QH8 159 aa16.08■□□□□ 0.16
TDP2-202ENST00000378198 ARPC5LQ9BPX5 153 aa16.08■□□□□ 0.16
TDP2-202ENST00000378198 MS4A7Q9GZW8 240 aaPredicted RBP16.08■□□□□ 0.16
TDP2-202ENST00000378198 PNRC2Q9NPJ4 139 aaKnown RBP16.08■□□□□ 0.16
TDP2-202ENST00000378198 ASH2LQ9UBL3 628 aa16.08■□□□□ 0.16
TDP2-202ENST00000378198 ZNF726A6NNF4 738 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 SULT2B1O00204 365 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 TPD52L2O43399 206 aaKnown RBP16.07■□□□□ 0.16
TDP2-202ENST00000378198 HCKP08631 526 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 QDPRP09417 244 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 CNR1P21554 472 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 CX3CR1P49238 355 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 GRB2P62993 217 aaKnown RBP16.07■□□□□ 0.16
TDP2-202ENST00000378198 SNTB1Q13884 538 aaKnown RBP16.07■□□□□ 0.16
TDP2-202ENST00000378198 ATXN7L3Q14CW9 347 aaPredicted RBP16.07■□□□□ 0.16
TDP2-202ENST00000378198 SHBQ15464 509 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 PAN3Q58A45 887 aaKnown RBP16.07■□□□□ 0.16
TDP2-202ENST00000378198 RNF144BQ7Z419 303 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 TMEM17Q86X19 198 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 SPEM1Q8N4L4 309 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 ARRDC1Q8N5I2 433 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 TMEM104Q8NE00 496 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 ZNF75AQ96N20 296 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 TMEM59Q9BXS4 323 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 FN3KRPQ9HA64 309 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 C12orf4Q9NQ89 552 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 TAS2R3Q9NYW6 316 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 C19orf25Q9UFG5 118 aaPredicted RBP16.07■□□□□ 0.16
TDP2-202ENST00000378198 HDGFL3Q9Y3E1 203 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 CEP290O15078 2479 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 LOC102725191A0A1B0GVB3 256 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 EEF1E1-BLOC1S5C9J1V9 151 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 SOCS1O15524 211 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 SLC2A1P11166 492 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 PSMB6P28072 239 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 ADH6P28332 368 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 OR3A4PP47883 348 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 STARD6P59095 220 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 CYCSP99999 105 aaKnown RBP16.07■□□□□ 0.16
TDP2-202ENST00000378198 INPP5JQ15735 1006 aaPredicted RBP16.07■□□□□ 0.16
TDP2-202ENST00000378198 MICBQ29980 383 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 TMEM128Q5BJH2 165 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 PLAC9Q5JTB6 97 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 ZNF385CQ66K41 422 aaPredicted RBP16.07■□□□□ 0.16
TDP2-202ENST00000378198 ZNF283Q8N7M2 679 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 OR56B1Q8NGI3 324 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 FAM71F1Q96KD3 344 aaPredicted RBP16.07■□□□□ 0.16
TDP2-202ENST00000378198 SOX7Q9BT81 388 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 CRB3Q9BUF7 120 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 NMES1Q9C002 83 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 ZNF319Q9P2F9 582 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 MBD2Q9UBB5 411 aa16.07■□□□□ 0.16
TDP2-202ENST00000378198 C5orf51A6NDU8 294 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 CEACAM18A8MTB9 384 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 ZNF814B7Z6K7 855 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 CDK2AP1O14519 115 aa16.06■□□□□ 0.16
TDP2-202ENST00000378198 RER1O15258 196 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms