RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 TXNIPQ9H3M7 391 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 DLL4Q9NR61 685 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 TRAV17A0A0B4J275 112 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 MS4A18H0YCH9 400 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 FKBP2P26885 142 aaKnown RBP12.76□□□□□ -0.37
TRIM13-202ENST00000378182 MS4A18Q3C1V0 323 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 OR4C3Q8NH37 302 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 OR2M2Q96R28 347 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 PRDM4Q9UKN5 801 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 HOXA4Q00056 320 aaPredicted RBP12.76□□□□□ -0.37
TRIM13-202ENST00000378182 UBE2FQ969M7 185 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 SLC25A22Q9H936 323 aa12.76□□□□□ -0.37
TRIM13-202ENST00000378182 SLC25A4P12235 298 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 TNFRSF1AP19438 455 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 POLR2IP36954 125 aaKnown RBP12.75□□□□□ -0.37
TRIM13-202ENST00000378182 CCR2P41597 374 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 PCBP4P57723 403 aaKnown RBP12.75□□□□□ -0.37
TRIM13-202ENST00000378182 NAAAQ02083 359 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 STRAPQ9Y3F4 350 aaKnown RBP12.75□□□□□ -0.37
TRIM13-202ENST00000378182 ARNTLO00327 626 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 DFFBO76075 338 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 CTSLP07711 333 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 TRNP1Q6NT89 227 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 OR10R2Q8NGX6 335 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 LILRB1Q8NHL6 650 aaPredicted RBP12.75□□□□□ -0.37
TRIM13-202ENST00000378182 ITPKCQ96DU7 683 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 ZNF716A6NP11 495 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 RNASEK-C17orf49H0YIS7 233 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 SOCS7O14512 581 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 GPANK1O95872 356 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 RRASP10301 218 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 TMEM267Q0VDI3 215 aaPredicted RBP12.75□□□□□ -0.37
TRIM13-202ENST00000378182 ZNF260Q3ZCT1 412 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 CCDC190Q86UF4 302 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 PXT1Q8NFP0 134 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 UBQLN3Q9H347 655 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 SIAEQ9HAT2 523 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 TRIP12Q14669 1992 aaPredicted RBP12.75□□□□□ -0.37
TRIM13-202ENST00000378182 M0R1X1 148 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 DCTN6O00399 190 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 TMPRSS2O15393 492 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 GABRG2P18507 467 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 ELFN2Q5R3F8 820 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 FAAP20Q6NZ36 180 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 SLC24A4Q8NFF2 622 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 GDF2Q9UK05 429 aaPredicted RBP12.75□□□□□ -0.37
TRIM13-202ENST00000378182 TMEM108Q6UXF1 575 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 HSD17B10Q99714 261 aaKnown RBP12.75□□□□□ -0.37
TRIM13-202ENST00000378182 TMPRSS13Q9BYE2 586 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 TOGARAM1Q9Y4F4 1720 aa12.75□□□□□ -0.37
TRIM13-202ENST00000378182 OR6C68A6NDL8 312 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 MMP7P09237 267 aaPredicted RBP12.74□□□□□ -0.37
TRIM13-202ENST00000378182 AGBL4Q5VU57 503 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 BCL7CQ8WUZ0 217 aaPredicted RBP12.74□□□□□ -0.37
TRIM13-202ENST00000378182 KDM3BQ7LBC6 1761 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 TUBAL3A6NHL2 446 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 HMGN4O00479 90 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 SCG5P05408 212 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 TPPP2P59282 170 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 SRRQ9GZT4 340 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 CTDSP1Q9GZU7 261 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 B3GALT5Q9Y2C3 310 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 MIA3Q5JRA6 1907 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 SULT1A3P0DMM9 295 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 SULT1A4P0DMN0 295 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 EPHA2P29317 976 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 SHBQ15464 509 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 LRRTM1Q86UE6 522 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 ACTR3CQ9C0K3 210 aaPredicted RBP12.74□□□□□ -0.37
TRIM13-202ENST00000378182 PCM1Q15154 2024 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 SCN2AQ99250 2005 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 CLEC2LP0C7M8 214 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 IGFBP6P24592 240 aaPredicted RBP12.74□□□□□ -0.37
TRIM13-202ENST00000378182 CEACAM6P40199 344 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 ETV1P50549 477 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 TMEM196Q5HYL7 178 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 TIGD3Q6B0B8 471 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 FBXO8Q9NRD0 319 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 GATCO43716 136 aaKnown RBP12.74□□□□□ -0.37
TRIM13-202ENST00000378182 COX6B1P14854 86 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 HMGA1P17096 107 aaKnown RBP12.74□□□□□ -0.37
TRIM13-202ENST00000378182 FCRL1Q96LA6 429 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 RPP25Q9BUL9 199 aaKnown RBP12.74□□□□□ -0.37
TRIM13-202ENST00000378182 F2RL2O00254 374 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 FAHP16930 419 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 GPR3P46089 330 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 LIPNQ5VXI9 398 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 OR2T2Q6IF00 324 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 TEX37Q96LM6 180 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 TMEM147Q9BVK8 224 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 KLK4Q9Y5K2 254 aa12.74□□□□□ -0.37
TRIM13-202ENST00000378182 SPAARA0A1B0GVQ0 90 aa12.73□□□□□ -0.37
TRIM13-202ENST00000378182 OR2C1O95371 312 aa12.73□□□□□ -0.37
TRIM13-202ENST00000378182 CD3EP07766 207 aa12.73□□□□□ -0.37
TRIM13-202ENST00000378182 MMP11P24347 488 aa12.73□□□□□ -0.37
TRIM13-202ENST00000378182 TMEM99Q8N816 258 aa12.73□□□□□ -0.37
TRIM13-202ENST00000378182 UFC1Q9Y3C8 167 aa12.73□□□□□ -0.37
TRIM13-202ENST00000378182 T-ENOLP0DO92 83 aa12.73□□□□□ -0.37
TRIM13-202ENST00000378182 PIGPP57054 158 aa12.73□□□□□ -0.37
TRIM13-202ENST00000378182 FZD2Q14332 565 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms