RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 CNIH1O95406 144 aa16.05■□□□□ 0.16
CLSTN1-202ENST00000377298 HBE1P02100 147 aa16.05■□□□□ 0.16
CLSTN1-202ENST00000377298 AADACP22760 399 aa16.05■□□□□ 0.16
CLSTN1-202ENST00000377298 OR10A3P58181 314 aa16.05■□□□□ 0.16
CLSTN1-202ENST00000377298 S100A12P80511 92 aa16.05■□□□□ 0.16
CLSTN1-202ENST00000377298 HRH4Q9H3N8 390 aa16.05■□□□□ 0.16
CLSTN1-202ENST00000377298 IGHV3-64DA0A0J9YX35 117 aa16.05■□□□□ 0.16
CLSTN1-202ENST00000377298 PATE3B3GLJ2 98 aa16.05■□□□□ 0.16
CLSTN1-202ENST00000377298 CYR61O00622 381 aa16.05■□□□□ 0.16
CLSTN1-202ENST00000377298 CDC20Q12834 499 aa16.05■□□□□ 0.16
CLSTN1-202ENST00000377298 H2BFWTQ7Z2G1 175 aa16.05■□□□□ 0.16
CLSTN1-202ENST00000377298 CNTNAP3Q9BZ76 1288 aa16.05■□□□□ 0.16
CLSTN1-202ENST00000377298 CROCCQ5TZA2 2017 aa16.05■□□□□ 0.16
CLSTN1-202ENST00000377298 MESP2Q0VG99 397 aa16.05■□□□□ 0.16
CLSTN1-202ENST00000377298 SMIM21Q3B7S5 101 aa16.05■□□□□ 0.16
CLSTN1-202ENST00000377298 AADACL4Q5VUY2 407 aa16.05■□□□□ 0.16
CLSTN1-202ENST00000377298 CBLN3Q6UW01 205 aa16.05■□□□□ 0.16
CLSTN1-202ENST00000377298 HIF1ANQ9NWT6 349 aa16.05■□□□□ 0.16
CLSTN1-202ENST00000377298 PRICKLE3O43900 615 aaPredicted RBP16.05■□□□□ 0.16
CLSTN1-202ENST00000377298 DEFA4P12838 97 aa16.05■□□□□ 0.16
CLSTN1-202ENST00000377298 BAXQ07812 192 aa16.05■□□□□ 0.16
CLSTN1-202ENST00000377298 NLRC3Q7RTR2 1065 aa16.05■□□□□ 0.16
CLSTN1-202ENST00000377298 RBMXL3Q8N7X1 1067 aaKnown RBP16.05■□□□□ 0.16
CLSTN1-202ENST00000377298 SPSB1Q96BD6 273 aa16.05■□□□□ 0.16
CLSTN1-202ENST00000377298 ST3GAL6Q9Y274 331 aa16.05■□□□□ 0.16
CLSTN1-202ENST00000377298 TEX51A0A1B0GUA7 166 aa16.04■□□□□ 0.16
CLSTN1-202ENST00000377298 FAHP16930 419 aa16.04■□□□□ 0.16
CLSTN1-202ENST00000377298 VASH2Q86V25 355 aa16.04■□□□□ 0.16
CLSTN1-202ENST00000377298 CCL27Q9Y4X3 112 aa16.04■□□□□ 0.16
CLSTN1-202ENST00000377298 BRWD1Q9NSI6 2320 aa16.04■□□□□ 0.16
CLSTN1-202ENST00000377298 MGMTP16455 207 aa16.04■□□□□ 0.16
CLSTN1-202ENST00000377298 TGFBR1P36897 503 aa16.04■□□□□ 0.16
CLSTN1-202ENST00000377298 TLE4Q04727 773 aa16.04■□□□□ 0.16
CLSTN1-202ENST00000377298 OSR2Q8N2R0 312 aa16.04■□□□□ 0.16
CLSTN1-202ENST00000377298 OR51A4Q8NGJ6 313 aa16.04■□□□□ 0.16
CLSTN1-202ENST00000377298 SSUH2Q9Y2M2 353 aa16.04■□□□□ 0.16
CLSTN1-202ENST00000377298 FADS1O60427 444 aa16.04■□□□□ 0.16
CLSTN1-202ENST00000377298 PSG6Q00889 435 aa16.04■□□□□ 0.16
CLSTN1-202ENST00000377298 HNF4GQ14541 408 aa16.04■□□□□ 0.16
CLSTN1-202ENST00000377298 ZNF468Q5VIY5 522 aaPredicted RBP16.04■□□□□ 0.16
CLSTN1-202ENST00000377298 OR5H15A6NDH6 313 aa16.04■□□□□ 0.16
CLSTN1-202ENST00000377298 ABCD4O14678 606 aa16.04■□□□□ 0.16
CLSTN1-202ENST00000377298 EPXP11678 715 aa16.04■□□□□ 0.16
CLSTN1-202ENST00000377298 ANXA7P20073 488 aaKnown RBP16.04■□□□□ 0.16
CLSTN1-202ENST00000377298 BTN1A1Q13410 526 aa16.04■□□□□ 0.16
CLSTN1-202ENST00000377298 OR10R2Q8NGX6 335 aa16.04■□□□□ 0.16
CLSTN1-202ENST00000377298 RHNO1Q9BSD3 238 aa16.04■□□□□ 0.16
CLSTN1-202ENST00000377298 SHARPINQ9H0F6 387 aa16.04■□□□□ 0.16
CLSTN1-202ENST00000377298 SLC17A2O00624 439 aa16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 DFFBO76075 338 aa16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 WDR54Q9H977 334 aa16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 LOXL4Q96JB6 756 aa16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 S1PR3Q99500 378 aa16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 COPS3Q9UNS2 423 aa16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 SMLR1H3BR10 107 aa16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 RPA2P15927 270 aa16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 TNFRSF1AP19438 455 aa16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 THBS3P49746 956 aa16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 FMODQ06828 376 aa16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 CATSPERDQ86XM0 798 aa16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 NANPQ8TBE9 248 aa16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 UHRF2Q96PU4 802 aa16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 TSPAN32Q96QS1 320 aa16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 FAM96BQ9Y3D0 163 aa16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 PLPP3O14495 311 aa16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 GPR12P47775 334 aa16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 RAC3P60763 192 aa16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 MC2RQ01718 297 aa16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 DYRK1AQ13627 763 aa16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 FAM185AQ8N0U4 392 aa16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 HAS2Q92819 552 aa16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 FYTTD1Q96QD9 318 aaKnown RBP16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 SERTAD4Q9NUC0 356 aa16.03■□□□□ 0.16
CLSTN1-202ENST00000377298 C1orf196B1AJZ1 125 aa16.02■□□□□ 0.16
CLSTN1-202ENST00000377298 ST8SIA3O43173 380 aa16.02■□□□□ 0.16
CLSTN1-202ENST00000377298 ALX3O95076 343 aa16.02■□□□□ 0.16
CLSTN1-202ENST00000377298 OPRM1P35372 400 aa16.02■□□□□ 0.16
CLSTN1-202ENST00000377298 ZNF674Q2M3X9 581 aa16.02■□□□□ 0.16
CLSTN1-202ENST00000377298 PRAMEF5Q5TYX0 476 aa16.02■□□□□ 0.16
CLSTN1-202ENST00000377298 PRAMEF6Q5VXH4 476 aa16.02■□□□□ 0.16
CLSTN1-202ENST00000377298 TMEM211Q6ICI0 200 aa16.02■□□□□ 0.16
CLSTN1-202ENST00000377298 NUDCD2Q8WVJ2 157 aa16.02■□□□□ 0.16
CLSTN1-202ENST00000377298 MCHR2Q969V1 340 aa16.02■□□□□ 0.16
CLSTN1-202ENST00000377298 RBM38Q9H0Z9 239 aaKnown RBP16.02■□□□□ 0.16
CLSTN1-202ENST00000377298 SUB1P53999 127 aaKnown RBP eCLIP16.02■□□□□ 0.16
CLSTN1-202ENST00000377298 SSBP1Q04837 148 aaKnown RBP16.02■□□□□ 0.16
CLSTN1-202ENST00000377298 OR1S2Q8NGQ3 325 aa16.02■□□□□ 0.16
CLSTN1-202ENST00000377298 RPS10P5Q9NQ39 176 aa16.02■□□□□ 0.16
CLSTN1-202ENST00000377298 FLVCR1Q9Y5Y0 555 aa16.02■□□□□ 0.16
CLSTN1-202ENST00000377298 SBF2Q86WG5 1849 aa16.02■□□□□ 0.16
CLSTN1-202ENST00000377298 TCRBV16S1A1N1A0A5B0 115 aa16.02■□□□□ 0.16
CLSTN1-202ENST00000377298 CYC1P08574 325 aa16.02■□□□□ 0.16
CLSTN1-202ENST00000377298 FCARP24071 287 aa16.02■□□□□ 0.16
CLSTN1-202ENST00000377298 SUMF1Q8NBK3 374 aa16.02■□□□□ 0.16
CLSTN1-202ENST00000377298 APOBEC4Q8WW27 367 aaKnown RBP16.02■□□□□ 0.16
CLSTN1-202ENST00000377298 OR6C68A6NDL8 312 aa16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 POM121CA8CG34 1229 aa16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 PDGFAP04085 211 aa16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 CT45A6P0DMU7 189 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms