RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 FURINP09958 794 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 TMEM241Q24JQ0 296 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 PRTGQ2VWP7 1150 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 BPIFA4PQ86YQ2 179 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 WBP2Q969T9 261 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 TMEM208Q9BTX3 173 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 ADGRL4Q9HBW9 690 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 AKAP6Q13023 2319 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 KIF26BQ2KJY2 2108 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 ANKRD61A6NGH8 418 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 HOXC11O43248 304 aaPredicted RBP10.6□□□□□ -0.71
VPS13A-205ENST00000376636 TMEM116Q8NCL8 245 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 IER2Q9BTL4 223 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 NAA50Q9GZZ1 169 aaKnown RBP10.6□□□□□ -0.71
VPS13A-205ENST00000376636 CLDN34H7C241 214 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 HCRTO43612 131 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 SP1P08047 785 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 LRRC15Q8TF66 581 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 NUMBLQ9Y6R0 609 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 PRSS1P07477 247 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 PGGT1BP53609 377 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 CDKN3Q16667 212 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 PTRH1Q86Y79 214 aaKnown RBP10.6□□□□□ -0.71
VPS13A-205ENST00000376636 CHST14Q8NCH0 376 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 FAM53CQ9NYF3 392 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 CGGBP1Q9UFW8 167 aaPredicted RBP10.6□□□□□ -0.71
VPS13A-205ENST00000376636 CSF2RBP32927 897 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 OPRK1P41145 380 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 YOD1Q5VVQ6 348 aaPredicted RBP10.6□□□□□ -0.71
VPS13A-205ENST00000376636 THYN1Q9P016 225 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 UFC1Q9Y3C8 167 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 SIGLEC6O43699 453 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 HRASP01112 189 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 COX6CP09669 75 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 HLA-BQ31612 363 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 ZC3HAV1LQ96H79 300 aaKnown RBP10.6□□□□□ -0.71
VPS13A-205ENST00000376636 ACY3Q96HD9 319 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 OR6C1Q96RD1 312 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 ING1Q9UK53 422 aaPredicted RBP10.6□□□□□ -0.71
VPS13A-205ENST00000376636 NTNG1Q9Y2I2 539 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 NID1P14543 1247 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 BCL3P20749 454 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 RAB37Q96AX2 223 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 C19orf43Q9BQ61 176 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 IL21Q9HBE4 155 aa10.6□□□□□ -0.71
VPS13A-205ENST00000376636 SLC6A12P48065 614 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 ARFGAP1Q8N6T3 406 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 SLC25A5P05141 298 aaKnown RBP10.59□□□□□ -0.71
VPS13A-205ENST00000376636 FGF2P09038 288 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 CD68P34810 354 aaPredicted RBP10.59□□□□□ -0.71
VPS13A-205ENST00000376636 SYT14P1Q58G82 188 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 COL5A1-AS1Q5SY13 56 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 MYPOPQ86VE0 399 aaPredicted RBP10.59□□□□□ -0.71
VPS13A-205ENST00000376636 USP22Q9UPT9 525 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 SLC35E2P0CK97 266 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 ZNF385BQ569K4 471 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 ZDHHC23Q8IYP9 409 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 DTD1Q8TEA8 209 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 TOE1Q96GM8 510 aaKnown RBP10.59□□□□□ -0.71
VPS13A-205ENST00000376636 OR5M11Q96RB7 305 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 DHRS4Q9BTZ2 278 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 NAGKQ9UJ70 344 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 A0A1B0GWA3 101 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 CDK2AP1O14519 115 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 RPL30P62888 115 aaKnown RBP10.59□□□□□ -0.71
VPS13A-205ENST00000376636 HOXA4Q00056 320 aaPredicted RBP10.59□□□□□ -0.71
VPS13A-205ENST00000376636 TMEM37Q8WXS4 190 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 EDAQ92838 391 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 EID2BQ96D98 161 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 TPSD1Q9BZJ3 242 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 GAL3ST2Q9H3Q3 398 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 TMEM9BQ9NQ34 198 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 BOLA1Q9Y3E2 137 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 PHLPP1O60346 1717 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 MEOX2P50222 304 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 PRSS45Q7RTY3 260 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 OR1L4Q8NGR5 311 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 NTNG2Q96CW9 530 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 UBE2ZQ9H832 354 aaPredicted RBP10.59□□□□□ -0.71
VPS13A-205ENST00000376636 IL17CQ9P0M4 197 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 GPR85P60893 370 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 LRRC10Q5BKY1 277 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 GPRIN1Q7Z2K8 1008 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 FAM210BQ96KR6 192 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 EGLN2Q96KS0 407 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 SLC22A13Q9Y226 551 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 MYO7AQ13402 2215 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 CRYBA1P05813 215 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 CTSAP10619 480 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 PLA1AQ53H76 456 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 Q8IYB0 196 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 TCEAL8Q8IYN2 117 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 DND1Q8IYX4 353 aaKnown RBP10.59□□□□□ -0.71
VPS13A-205ENST00000376636 GPR137Q96N19 417 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 LHX3Q9UBR4 397 aa10.59□□□□□ -0.71
VPS13A-205ENST00000376636 AHCTF1Q8WYP5 2266 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 DOCK11Q5JSL3 2073 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 T-ENOLP0DO92 83 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 TMEM81Q6P7N7 255 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 RBPMS2Q6ZRY4 209 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms