RNA–Protein interactions for RNA: ENST00000376618.6

CPT1A-202, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-202ENST00000376618 ZNF878C9JN71 531 aa12.35□□□□□ -0.43
CPT1A-202ENST00000376618 F5H5P2 479 aa12.35□□□□□ -0.43
CPT1A-202ENST00000376618 CRTAPO75718 401 aaPredicted RBP12.35□□□□□ -0.43
CPT1A-202ENST00000376618 ITGB2P05107 769 aa12.35□□□□□ -0.43
CPT1A-202ENST00000376618 TMEM50BP56557 158 aa12.35□□□□□ -0.43
CPT1A-202ENST00000376618 SEC61A1P61619 476 aaKnown RBP12.35□□□□□ -0.43
CPT1A-202ENST00000376618 PPP1R1AQ13522 171 aa12.35□□□□□ -0.43
CPT1A-202ENST00000376618 HLXQ14774 488 aaPredicted RBP12.35□□□□□ -0.43
CPT1A-202ENST00000376618 PDCD1Q15116 288 aa12.35□□□□□ -0.43
CPT1A-202ENST00000376618 ESCO2Q56NI9 601 aa12.35□□□□□ -0.43
CPT1A-202ENST00000376618 C9orf135Q5VTT2 229 aa12.35□□□□□ -0.43
CPT1A-202ENST00000376618 C5orf46Q6UWT4 87 aa12.35□□□□□ -0.43
CPT1A-202ENST00000376618 SPICQ8N5J4 248 aa12.35□□□□□ -0.43
CPT1A-202ENST00000376618 WDR13Q9H1Z4 485 aa12.35□□□□□ -0.43
CPT1A-202ENST00000376618 SLC39A1Q9NY26 324 aa12.35□□□□□ -0.43
CPT1A-202ENST00000376618 GLTPQ9NZD2 209 aa12.35□□□□□ -0.43
CPT1A-202ENST00000376618 C19orf25Q9UFG5 118 aaPredicted RBP12.35□□□□□ -0.43
CPT1A-202ENST00000376618 UBQLN2Q9UHD9 624 aa12.35□□□□□ -0.43
CPT1A-202ENST00000376618 AQP7P3A6NL99 342 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 TRAPPC6AO75865 159 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 CD63P08962 238 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 SUMO3P55854 103 aaPredicted RBP12.34□□□□□ -0.43
CPT1A-202ENST00000376618 GK2Q14410 553 aaPredicted RBP12.34□□□□□ -0.43
CPT1A-202ENST00000376618 SNAI3Q3KNW1 292 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 FAM209AQ5JX71 171 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 C1orf100Q5SVJ3 147 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 RPS19BP1Q86WX3 136 aaKnown RBP12.34□□□□□ -0.43
CPT1A-202ENST00000376618 DEFB123Q8N688 67 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 FADS6Q8N9I5 356 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 AGBL5Q8NDL9 886 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 STEAP2Q8NFT2 490 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 ARHGAP5-AS1Q96IT6 56 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 ALKBH3Q96Q83 286 aaPredicted RBP12.34□□□□□ -0.43
CPT1A-202ENST00000376618 ST6GALNAC5Q9BVH7 336 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 TMUB1Q9BVT8 246 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 B3GNT2Q9NY97 397 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 NOP16Q9Y3C1 178 aaKnown RBP12.34□□□□□ -0.43
CPT1A-202ENST00000376618 TRAV14DV4A0A0A6YYC5 116 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 NSG1A0A0A6YYJ2 146 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 LOC390937A0A1W2PQ73 354 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 OR14I1A6ND48 311 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 ZSCAN5BA6NJL1 495 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 HSPB2A8KAH6 182 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 LAMTOR5O43504 91 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 IL5P05113 134 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 GIPP09681 153 aaPredicted RBP12.34□□□□□ -0.43
CPT1A-202ENST00000376618 FGF5P12034 268 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 HSPB2Q16082 182 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 TMUB2Q71RG4 321 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 TIPARPQ7Z3E1 657 aaKnown RBP12.34□□□□□ -0.43
CPT1A-202ENST00000376618 MARCH1Q8TCQ1 289 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 AQP3Q92482 292 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 PNPLA2Q96AD5 504 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 FBXO17Q96EF6 278 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 TRAF4Q9BUZ4 470 aaPredicted RBP12.34□□□□□ -0.43
CPT1A-202ENST00000376618 HPF1Q9NWY4 346 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 TAS2R8Q9NYW2 309 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 ZNF224Q9NZL3 707 aa12.34□□□□□ -0.43
CPT1A-202ENST00000376618 MRPS28Q9Y2Q9 187 aaKnown RBP12.34□□□□□ -0.43
CPT1A-202ENST00000376618 GVINP1Q7Z2Y8 2422 aa12.33□□□□□ -0.43
CPT1A-202ENST00000376618 DMXL2Q8TDJ6 3036 aa12.33□□□□□ -0.43
CPT1A-202ENST00000376618 RP1L1Q8IWN7 2480 aaPredicted RBP12.33□□□□□ -0.44
CPT1A-202ENST00000376618 C3orf80F5H4A9 247 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 HTR3BO95264 441 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 NAGAP17050 411 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 TCN2P20062 427 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 SERPINA2P20848 420 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 NPY4RP50391 375 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 SUCLG1P53597 346 aaKnown RBP12.33□□□□□ -0.44
CPT1A-202ENST00000376618 DLX5P56178 289 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 ACTBP60709 375 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 ACTG1P63261 375 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 UBE2V2Q15819 145 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 SLC25A53Q5H9E4 307 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 SPINK14Q6IE38 97 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 SLC23A3Q6PIS1 610 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 C3P1Q6ZMU1 363 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 SLC22A24Q8N4F4 322 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 BHLHE23Q8NDY6 225 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 OR6X1Q8NH79 312 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 C1orf147Q96MC9 270 aaPredicted RBP12.33□□□□□ -0.44
CPT1A-202ENST00000376618 UTP23Q9BRU9 249 aaKnown RBP12.33□□□□□ -0.44
CPT1A-202ENST00000376618 LPAR5Q9H1C0 372 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 DKKL1Q9UK85 242 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 SHANK1Q9Y566 2161 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 PINLYPA6NC86 204 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 MPTX1A8MV57 137 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 SNRPGP15A8MWD9 76 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 EEF1E1-BLOC1S5C9J1V9 151 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 STMND1H3BQB6 276 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 ETV2O00321 342 aaPredicted RBP12.33□□□□□ -0.44
CPT1A-202ENST00000376618 ANGPTL7O43827 346 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 MSX1P28360 303 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 HGFACQ04756 655 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 WIPI1Q5MNZ9 446 aaPredicted RBP12.33□□□□□ -0.44
CPT1A-202ENST00000376618 CRIP3Q6Q6R5 217 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 C20orf196Q8IYI0 205 aa12.33□□□□□ -0.44
CPT1A-202ENST00000376618 C12orf45Q8N5I9 185 aaPredicted RBP12.33□□□□□ -0.44
CPT1A-202ENST00000376618 ZNF845Q96IR2 970 aaPredicted RBP12.33□□□□□ -0.44
CPT1A-202ENST00000376618 HDHD3Q9BSH5 251 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms