RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 FAM122BQ7Z309 247 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 PRR18Q8N4B5 295 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 SP7Q8TDD2 431 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 FBXO17Q96EF6 278 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 RGCCQ9H4X1 137 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 LRRK1Q38SD2 2015 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 C9orf170A2RU37 121 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 A6NCN8 305 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 LRP3O75074 770 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 CAMLGP49069 296 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 RGS19P49795 217 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 MTCP1P56278 107 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 GPR85P60893 370 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 SULF2Q8IWU5 870 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR1S1Q8NH92 325 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 GPR173Q9NS66 373 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 ZNF629Q9UEG4 869 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 NBASA2RRP1 2371 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 DAOP14920 347 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 RPA2P15927 270 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 CX3CR1P49238 355 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 GGTLC2Q14390 218 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 PLEKHN1Q494U1 663 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 EMC4Q5J8M3 183 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 BAP18Q8IXM2 172 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR51F2Q8NH61 342 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 FNDC9Q8TBE3 224 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 GPX8Q8TED1 209 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 LRFN5Q96NI6 719 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 ZNF426Q9BUY5 554 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 MASP2O00187 686 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 PLPP3O14495 311 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 NFYBP25208 207 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 ID4P47928 161 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 RNF4P78317 190 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 ACY1Q03154 408 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 C17orf67Q0P5P2 114 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 ZNF273Q14593 569 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 TSPO2Q5TGU0 170 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 EIF5AL1Q6IS14 154 aaKnown RBP12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OGFOD3Q6PK18 319 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR10G3Q8NGC4 313 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 SULT4A1Q9BR01 284 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 NMNAT2Q9BZQ4 307 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 DNTTIP1Q9H147 329 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 WDR13Q9H1Z4 485 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 DKKL1Q9UK85 242 aa12.83□□□□□ -0.36
TNFRSF1B-201ENST00000376259 KIAA1671Q9BY89 1806 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 COL4A4P53420 1690 aaPredicted RBP12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 SCRG1O75711 98 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 MT-ATP6P00846 226 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR8U9P0C7N5 309 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 CSF2RBP32927 897 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 RAB32Q13637 225 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR5M8Q8NGP6 311 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR2AE1Q8NHA4 323 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 KCNK7Q9Y2U2 307 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 MYO7BQ6PIF6 2116 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 RIF1Q5UIP0 2472 aaKnown RBP12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 MFSD2BA6NFX1 497 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 FRG2CA6NGY1 282 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 K7EPK0 472 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 BCL2L11O43521 198 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 MYBPHQ13203 477 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 FHL1Q13642 323 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 CDCP2Q5VXM1 449 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 ADAM5Q6NVV9 412 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 NAA40Q86UY6 237 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 FAM71E2Q8N5Q1 922 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR5L1Q8NGL2 311 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 C14orf79Q96F83 325 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 C8orf33Q9H7E9 229 aaPredicted RBP12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 A0A1W2PPC1 479 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 SPRY1O43609 319 aaPredicted RBP12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 MTRF1O75570 445 aaKnown RBP12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR7C1O76099 320 aaPredicted RBP12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 VSIG8P0DPA2 414 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 ADH6P28332 368 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 CSNK1A1P48729 337 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR2B8PP59922 312 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 MFAP5Q13361 173 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 SLC43A2Q8N370 569 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 TMEM229BQ8NBD8 167 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR10Z1Q8NGY1 313 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 REEP6Q96HR9 211 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 CMSS1Q9BQ75 279 aaKnown RBP12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 CHRDQ9H2X0 955 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 CHST11Q9NPF2 352 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 GLS2Q9UI32 602 aa12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 PUS1Q9Y606 427 aaKnown RBP eCLIP12.82□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR2F2O95006 317 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 EPHA1P21709 976 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 RRADP55042 308 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR2F1Q13607 317 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 PEA15Q15121 130 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 NKAIN1Q4KMZ8 207 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms