RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 PGA3P0DJD8 388 aa12.39□□□□□ -0.43
MSH5-202ENST00000375740 EIF1P41567 113 aaKnown RBP12.39□□□□□ -0.43
MSH5-202ENST00000375740 MFAP5Q13361 173 aa12.39□□□□□ -0.43
MSH5-202ENST00000375740 GLT8D1Q68CQ7 371 aa12.39□□□□□ -0.43
MSH5-202ENST00000375740 ZNF704Q6ZNC4 412 aaPredicted RBP12.39□□□□□ -0.43
MSH5-202ENST00000375740 OR51A2Q8NGJ7 313 aa12.39□□□□□ -0.43
MSH5-202ENST00000375740 OR2Y1Q8NGV0 311 aa12.39□□□□□ -0.43
MSH5-202ENST00000375740 M1APQ8TC57 530 aa12.39□□□□□ -0.43
MSH5-202ENST00000375740 SEC61A2Q9H9S3 476 aa12.39□□□□□ -0.43
MSH5-202ENST00000375740 CGGBP1Q9UFW8 167 aaPredicted RBP12.39□□□□□ -0.43
MSH5-202ENST00000375740 TRAV18A0A075B6X5 111 aa12.39□□□□□ -0.43
MSH5-202ENST00000375740 MEX3AA1L020 520 aaKnown RBP12.39□□□□□ -0.43
MSH5-202ENST00000375740 UBE2QL1A1L167 161 aa12.39□□□□□ -0.43
MSH5-202ENST00000375740 DCDC2BA2VCK2 349 aa12.39□□□□□ -0.43
MSH5-202ENST00000375740 GGT3PA6NGU5 568 aa12.39□□□□□ -0.43
MSH5-202ENST00000375740 RPA2P15927 270 aa12.39□□□□□ -0.43
MSH5-202ENST00000375740 ADH6P28332 368 aa12.39□□□□□ -0.43
MSH5-202ENST00000375740 MECP2P51608 486 aaKnown RBP12.39□□□□□ -0.43
MSH5-202ENST00000375740 GLYATL3Q5SZD4 288 aa12.39□□□□□ -0.43
MSH5-202ENST00000375740 OR2W3Q7Z3T1 314 aa12.39□□□□□ -0.43
MSH5-202ENST00000375740 ZNF546Q86UE3 836 aa12.39□□□□□ -0.43
MSH5-202ENST00000375740 TNFAIP8L1Q8WVP5 186 aa12.39□□□□□ -0.43
MSH5-202ENST00000375740 OXGR1Q96P68 337 aa12.39□□□□□ -0.43
MSH5-202ENST00000375740 PCDHB10Q9UN67 800 aa12.39□□□□□ -0.43
MSH5-202ENST00000375740 COL6A3P12111 3177 aa12.39□□□□□ -0.43
MSH5-202ENST00000375740 MEIS3P1A6NDR6 274 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 SULT2B1O00204 365 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 RBBP9O75884 186 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 IGHG1P01857 330 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 CCL3P10147 92 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 FSTP19883 344 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 BDKRB2P30411 391 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 CDAP32320 146 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 MMP16P51512 607 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 SNRPEP62304 92 aaKnown RBP12.38□□□□□ -0.43
MSH5-202ENST00000375740 SPOCK1Q08629 439 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 MICBQ29980 383 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 TMEM244Q5VVB8 128 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 NOXO1Q8NFA2 376 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 OR10S1Q8NGN2 331 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 RXFP4Q8TDU9 374 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 SLC25A43Q8WUT9 341 aaPredicted RBP12.38□□□□□ -0.43
MSH5-202ENST00000375740 GNRHR2Q96P88 292 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 FAM117AQ9C073 453 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 TLNRD1Q9H1K6 362 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 ATG5Q9H1Y0 275 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 C1orf198Q9H425 327 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 ZNF160Q9HCG1 818 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 NOSIPQ9Y314 301 aaKnown RBP12.38□□□□□ -0.43
MSH5-202ENST00000375740 HDGFL3Q9Y3E1 203 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 MRPS18BQ9Y676 258 aaKnown RBP12.38□□□□□ -0.43
MSH5-202ENST00000375740 G3V3Y1 287 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 ZNF43P17038 809 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 NFYBP25208 207 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 HTR2CP28335 458 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 PTGFRP43088 359 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 NPBWR1P48145 328 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 GUCA2AQ02747 115 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 PAN3Q58A45 887 aaKnown RBP12.38□□□□□ -0.43
MSH5-202ENST00000375740 OR4C16Q8NGL9 310 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 ZBTB8AQ96BR9 441 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 ANGPTL4Q9BY76 406 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 PROK2Q9HC23 129 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 FAM206AQ9NX38 181 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 PISDQ9UG56 409 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 MED12Q93074 2177 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 VPS13AQ96RL7 3174 aa12.38□□□□□ -0.43
MSH5-202ENST00000375740 H7C417 338 aa12.37□□□□□ -0.43
MSH5-202ENST00000375740 CD37P11049 281 aa12.37□□□□□ -0.43
MSH5-202ENST00000375740 MGMTP16455 207 aa12.37□□□□□ -0.43
MSH5-202ENST00000375740 SSR4P51571 173 aa12.37□□□□□ -0.43
MSH5-202ENST00000375740 GMFBP60983 142 aa12.37□□□□□ -0.43
MSH5-202ENST00000375740 HYAL4Q2M3T9 481 aa12.37□□□□□ -0.43
MSH5-202ENST00000375740 LRRC37A5PQ49AS3 106 aa12.37□□□□□ -0.43
MSH5-202ENST00000375740 KLHL24Q6TFL4 600 aa12.37□□□□□ -0.43
MSH5-202ENST00000375740 OR6X1Q8NH79 312 aa12.37□□□□□ -0.43
MSH5-202ENST00000375740 MTFP1Q9UDX5 166 aa12.37□□□□□ -0.43
MSH5-202ENST00000375740 LHFPL6Q9Y693 200 aa12.37□□□□□ -0.43
MSH5-202ENST00000375740 NSG1A0A0A6YYJ2 146 aa12.37□□□□□ -0.43
MSH5-202ENST00000375740 KCNAB3O43448 404 aa12.37□□□□□ -0.43
MSH5-202ENST00000375740 TTRP02766 147 aa12.37□□□□□ -0.43
MSH5-202ENST00000375740 UBCP0CG48 685 aaKnown RBP12.37□□□□□ -0.43
MSH5-202ENST00000375740 FKBP2P26885 142 aaKnown RBP12.37□□□□□ -0.43
MSH5-202ENST00000375740 FOLR3P41439 243 aa12.37□□□□□ -0.43
MSH5-202ENST00000375740 PPIAP62937 165 aaKnown RBP12.37□□□□□ -0.43
MSH5-202ENST00000375740 SLC35A1P78382 337 aa12.37□□□□□ -0.43
MSH5-202ENST00000375740 ATXN7L3Q14CW9 347 aaPredicted RBP12.37□□□□□ -0.43
MSH5-202ENST00000375740 LY6G6FQ5SQ64 297 aa12.37□□□□□ -0.43
MSH5-202ENST00000375740 JMJD6Q6NYC1 403 aaPredicted RBP12.37□□□□□ -0.43
MSH5-202ENST00000375740 SLC25A47Q6Q0C1 308 aa12.37□□□□□ -0.43
MSH5-202ENST00000375740 TMPPEQ6ZT21 453 aa12.37□□□□□ -0.43
MSH5-202ENST00000375740 RPS19BP1Q86WX3 136 aaKnown RBP12.37□□□□□ -0.43
MSH5-202ENST00000375740 THAP6Q8TBB0 222 aa12.37□□□□□ -0.43
MSH5-202ENST00000375740 FGGYQ96C11 551 aa12.37□□□□□ -0.43
MSH5-202ENST00000375740 FBXO17Q96EF6 278 aa12.37□□□□□ -0.43
MSH5-202ENST00000375740 TMEM231Q9H6L2 316 aa12.37□□□□□ -0.43
MSH5-202ENST00000375740 SLC17A5Q9NRA2 495 aa12.37□□□□□ -0.43
MSH5-202ENST00000375740 GDF2Q9UK05 429 aaPredicted RBP12.37□□□□□ -0.43
MSH5-202ENST00000375740 PHF3Q92576 2039 aaKnown RBP12.37□□□□□ -0.43
MSH5-202ENST00000375740 MEGF11A6BM72 1044 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms