RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 ABCD3P28288 659 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 ECH1Q13011 328 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 RAB32Q13637 225 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 ANKRD55Q3KP44 614 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 GRINAQ7Z429 371 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 C15orf54Q8N8G6 183 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 ZNF248Q8NDW4 579 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 NUBPLQ8TB37 319 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 NANPQ8TBE9 248 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 TSLPQ969D9 159 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 ZNF775Q96BV0 537 aaPredicted RBP18.78■□□□□ 0.6
UPF3A-202ENST00000375299 OR10C1Q96KK4 312 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 C2orf50Q96LR7 162 aa18.78■□□□□ 0.6
UPF3A-202ENST00000375299 TMEM150CB9EJG8 249 aa18.77■□□□□ 0.6
UPF3A-202ENST00000375299 H0YIG0 161 aa18.77■□□□□ 0.6
UPF3A-202ENST00000375299 DDAH2O95865 285 aa18.77■□□□□ 0.6
UPF3A-202ENST00000375299 ZNF93P35789 620 aaPredicted RBP18.77■□□□□ 0.6
UPF3A-202ENST00000375299 GABRA4P48169 554 aa18.77■□□□□ 0.6
UPF3A-202ENST00000375299 CLDN6P56747 220 aa18.77■□□□□ 0.6
UPF3A-202ENST00000375299 SUPT4H1P63272 117 aaKnown RBP18.77■□□□□ 0.6
UPF3A-202ENST00000375299 TDGQ13569 410 aa18.77■□□□□ 0.6
UPF3A-202ENST00000375299 RBM39Q14498 530 aaKnown RBP18.77■□□□□ 0.6
UPF3A-202ENST00000375299 PEG10Q86TG7 708 aaKnown RBP18.77■□□□□ 0.6
UPF3A-202ENST00000375299 OR5D14Q8NGL3 314 aa18.77■□□□□ 0.6
UPF3A-202ENST00000375299 PBOV1Q9GZY1 135 aa18.77■□□□□ 0.6
UPF3A-202ENST00000375299 SLC26A1Q9H2B4 701 aa18.77■□□□□ 0.6
UPF3A-202ENST00000375299 TAF9BQ9HBM6 251 aa18.77■□□□□ 0.6
UPF3A-202ENST00000375299 DHCR7Q9UBM7 475 aaKnown RBP18.77■□□□□ 0.6
UPF3A-202ENST00000375299 IGKV1D-43A0A0B4J1Z2 117 aa18.77■□□□□ 0.6
UPF3A-202ENST00000375299 B4DGG1 531 aa18.77■□□□□ 0.6
UPF3A-202ENST00000375299 MFNGO00587 321 aa18.77■□□□□ 0.6
UPF3A-202ENST00000375299 FBXO24O75426 580 aa18.77■□□□□ 0.6
UPF3A-202ENST00000375299 SMIM6P0DI80 62 aa18.77■□□□□ 0.6
UPF3A-202ENST00000375299 PTAFRP25105 342 aa18.77■□□□□ 0.6
UPF3A-202ENST00000375299 PLCXD2Q0VAA5 305 aa18.77■□□□□ 0.6
UPF3A-202ENST00000375299 SMAD2Q15796 467 aaKnown RBP18.77■□□□□ 0.6
UPF3A-202ENST00000375299 RPL7L1Q6DKI1 246 aaKnown RBP18.77■□□□□ 0.6
UPF3A-202ENST00000375299 ZNF529Q6P280 563 aa18.77■□□□□ 0.6
UPF3A-202ENST00000375299 KLHL24Q6TFL4 600 aa18.77■□□□□ 0.6
UPF3A-202ENST00000375299 TMEM92Q6UXU6 159 aa18.77■□□□□ 0.6
UPF3A-202ENST00000375299 POC1AQ8NBT0 407 aa18.77■□□□□ 0.6
UPF3A-202ENST00000375299 EGLN1Q9GZT9 426 aa18.77■□□□□ 0.6
UPF3A-202ENST00000375299 METTL8Q9H825 291 aaKnown RBP18.77■□□□□ 0.6
UPF3A-202ENST00000375299 TDRD6O60522 2096 aaKnown RBP18.77■□□□□ 0.59
UPF3A-202ENST00000375299 NPIPA5E9PKD4 350 aa18.76■□□□□ 0.59
UPF3A-202ENST00000375299 TAAR5O14804 337 aa18.76■□□□□ 0.59
UPF3A-202ENST00000375299 FCGR3AP08637 254 aa18.76■□□□□ 0.59
UPF3A-202ENST00000375299 CTSEP14091 401 aa18.76■□□□□ 0.59
UPF3A-202ENST00000375299 PI3P19957 117 aa18.76■□□□□ 0.59
UPF3A-202ENST00000375299 NME2P22392 152 aa18.76■□□□□ 0.59
UPF3A-202ENST00000375299 F2RL1P55085 397 aa18.76■□□□□ 0.59
UPF3A-202ENST00000375299 DCAF7P61962 342 aa18.76■□□□□ 0.59
UPF3A-202ENST00000375299 EBPQ15125 230 aaKnown RBP18.76■□□□□ 0.59
UPF3A-202ENST00000375299 PLAC9Q5JTB6 97 aa18.76■□□□□ 0.59
UPF3A-202ENST00000375299 BTNL8Q6UX41 500 aa18.76■□□□□ 0.59
UPF3A-202ENST00000375299 NAA40Q86UY6 237 aa18.76■□□□□ 0.59
UPF3A-202ENST00000375299 LURAP1LQ8IV03 231 aa18.76■□□□□ 0.59
UPF3A-202ENST00000375299 SCGB3A2Q96PL1 93 aa18.76■□□□□ 0.59
UPF3A-202ENST00000375299 NPIPA1Q9UND3 350 aa18.76■□□□□ 0.59
UPF3A-202ENST00000375299 FTCDNL1E5RQL4 147 aa18.76■□□□□ 0.59
UPF3A-202ENST00000375299 HIST1H1DP16402 221 aaKnown RBP18.76■□□□□ 0.59
UPF3A-202ENST00000375299 CD80P33681 288 aa18.76■□□□□ 0.59
UPF3A-202ENST00000375299 SULT1A2P50226 295 aa18.76■□□□□ 0.59
UPF3A-202ENST00000375299 TSC22D1Q15714 1073 aa18.76■□□□□ 0.59
UPF3A-202ENST00000375299 WDFY1Q8IWB7 410 aa18.76■□□□□ 0.59
UPF3A-202ENST00000375299 GPR119Q8TDV5 335 aa18.76■□□□□ 0.59
UPF3A-202ENST00000375299 SLAMF6Q96DU3 332 aa18.76■□□□□ 0.59
UPF3A-202ENST00000375299 RAB3CQ96E17 227 aa18.76■□□□□ 0.59
UPF3A-202ENST00000375299 NECAB3Q96P71 396 aaPredicted RBP18.76■□□□□ 0.59
UPF3A-202ENST00000375299 RTBDNQ9BSG5 229 aaPredicted RBP18.76■□□□□ 0.59
UPF3A-202ENST00000375299 MMACHCQ9Y4U1 282 aa18.76■□□□□ 0.59
UPF3A-202ENST00000375299 COL5A1P20908 1838 aaPredicted RBP18.76■□□□□ 0.59
UPF3A-202ENST00000375299 MS4A18H0YCH9 400 aa18.75■□□□□ 0.59
UPF3A-202ENST00000375299 SOCS1O15524 211 aa18.75■□□□□ 0.59
UPF3A-202ENST00000375299 MPIG6BO95866 241 aa18.75■□□□□ 0.59
UPF3A-202ENST00000375299 S100A8P05109 93 aa18.75■□□□□ 0.59
UPF3A-202ENST00000375299 SERPINA5P05154 406 aa18.75■□□□□ 0.59
UPF3A-202ENST00000375299 MS4A18Q3C1V0 323 aa18.75■□□□□ 0.59
UPF3A-202ENST00000375299 FAM76BQ5HYJ3 339 aa18.75■□□□□ 0.59
UPF3A-202ENST00000375299 HLA-DQA1Q5Y7H0 255 aa18.75■□□□□ 0.59
UPF3A-202ENST00000375299 GLIPR1L1Q6UWM5 242 aa18.75■□□□□ 0.59
UPF3A-202ENST00000375299 RNF144BQ7Z419 303 aa18.75■□□□□ 0.59
UPF3A-202ENST00000375299 FAM219AQ8IW50 185 aa18.75■□□□□ 0.59
UPF3A-202ENST00000375299 C9orf40Q8IXQ3 194 aa18.75■□□□□ 0.59
UPF3A-202ENST00000375299 C14orf79Q96F83 325 aa18.75■□□□□ 0.59
UPF3A-202ENST00000375299 TMEM41AQ96HV5 264 aa18.75■□□□□ 0.59
UPF3A-202ENST00000375299 KCNK17Q96T54 332 aa18.75■□□□□ 0.59
UPF3A-202ENST00000375299 SULT4A1Q9BR01 284 aa18.75■□□□□ 0.59
UPF3A-202ENST00000375299 ASH2LQ9UBL3 628 aa18.75■□□□□ 0.59
UPF3A-202ENST00000375299 C1orf196B1AJZ1 125 aa18.75■□□□□ 0.59
UPF3A-202ENST00000375299 FAM157AC9JC47 383 aa18.75■□□□□ 0.59
UPF3A-202ENST00000375299 RCC1P18754 421 aaPredicted RBP18.75■□□□□ 0.59
UPF3A-202ENST00000375299 IL15RAQ13261 267 aa18.75■□□□□ 0.59
UPF3A-202ENST00000375299 DHRS11Q6UWP2 260 aa18.75■□□□□ 0.59
UPF3A-202ENST00000375299 TMEM104Q8NE00 496 aa18.75■□□□□ 0.59
UPF3A-202ENST00000375299 OR5H2Q8NGV7 314 aa18.75■□□□□ 0.59
UPF3A-202ENST00000375299 PARP11Q9NR21 331 aa18.75■□□□□ 0.59
UPF3A-202ENST00000375299 SRPK3Q9UPE1 567 aa18.75■□□□□ 0.59
UPF3A-202ENST00000375299 MRPS28Q9Y2Q9 187 aaKnown RBP18.75■□□□□ 0.59
UPF3A-202ENST00000375299 POMT1Q9Y6A1 747 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms