RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 TMEM176BQ3YBM2 270 aaPredicted RBP7.31□□□□□ -1.24
UBR4-202ENST00000375224 TMPPEQ6ZT21 453 aa7.31□□□□□ -1.24
UBR4-202ENST00000375224 SIAH3Q8IW03 269 aa7.31□□□□□ -1.24
UBR4-202ENST00000375224 OR11H4Q8NGC9 324 aa7.31□□□□□ -1.24
UBR4-202ENST00000375224 OR1J4Q8NGS1 313 aa7.31□□□□□ -1.24
UBR4-202ENST00000375224 ST7LQ8TDW4 575 aa7.31□□□□□ -1.24
UBR4-202ENST00000375224 RNF133Q8WVZ7 376 aa7.31□□□□□ -1.24
UBR4-202ENST00000375224 SLAMF9Q96A28 289 aa7.31□□□□□ -1.24
UBR4-202ENST00000375224 SLC25A38Q96DW6 304 aa7.31□□□□□ -1.24
UBR4-202ENST00000375224 C1orf198Q9H425 327 aa7.31□□□□□ -1.24
UBR4-202ENST00000375224 B3GAT1Q9P2W7 334 aa7.31□□□□□ -1.24
UBR4-202ENST00000375224 GPR160Q9UJ42 338 aa7.31□□□□□ -1.24
UBR4-202ENST00000375224 SCP2D1Q9UJQ7 156 aa7.31□□□□□ -1.24
UBR4-202ENST00000375224 OR52A1Q9UKL2 312 aa7.31□□□□□ -1.24
UBR4-202ENST00000375224 FREM3P0C091 2139 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 ALPK2Q86TB3 2170 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 A0A087X0M5 115 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 A0A1B0GX30 115 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 AQP7P3A6NL99 342 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 ACOT7O00154 380 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 GDF9O60383 454 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 SNAPC5O75971 98 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 VAMP5O95183 116 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 GDNFP39905 211 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 FMODQ06828 376 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 RAB11BQ15907 218 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 ODF4Q2M2E3 257 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 PRAMEF20Q5VT98 475 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 CFAP161Q6P656 301 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 C6orf15Q6UXA7 325 aaPredicted RBP7.3□□□□□ -1.24
UBR4-202ENST00000375224 NHLRC1Q6VVB1 395 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 OR10AC1Q8NH08 325 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 RELTQ969Z4 430 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 NAA11Q9BSU3 229 aaPredicted RBP7.3□□□□□ -1.24
UBR4-202ENST00000375224 CACNG6Q9BXT2 260 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 SLC22A13Q9Y226 551 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 LOXL2Q9Y4K0 774 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 PCDHGA1Q9Y5H4 931 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 TRAV8-7A0A075B6U6 113 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 TMEM269A0A1B0GVZ9 245 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 GJE1A6NN92 205 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 SLC17A2O00624 439 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 LDLRAD4O15165 306 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 SRSF10O75494 262 aaKnown RBP7.3□□□□□ -1.24
UBR4-202ENST00000375224 STK17BO94768 372 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 MPZL1O95297 269 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 PNPP00491 289 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 TCRBP04435 133 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 SP9P0CG40 484 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 ZNF17P17021 662 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 ANXA7P20073 488 aaKnown RBP7.3□□□□□ -1.24
UBR4-202ENST00000375224 HNF1AP20823 631 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 DNASE1L1P49184 302 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 MMP16P51512 607 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 KLF9Q13886 244 aaPredicted RBP7.3□□□□□ -1.24
UBR4-202ENST00000375224 SEZ6L2Q6UXD5 910 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 ESPNLQ6ZVH7 1005 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 CBLN2Q8IUK8 224 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 SKA3Q8IX90 412 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 EIF4E3Q8N5X7 224 aaKnown RBP7.3□□□□□ -1.24
UBR4-202ENST00000375224 ZNF383Q8NA42 475 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 OR51A4Q8NGJ6 313 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 OR2AJ1Q8NGZ0 328 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 ASB5Q8WWX0 329 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 C11orf40Q8WZ69 217 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 TAAR9Q96RI9 348 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 ARRDC1-AS1Q9H2J1 176 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 ZNF160Q9HCG1 818 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 DKKL1Q9UK85 242 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 EMC9Q9Y3B6 208 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 TECTAO75443 2155 aa7.3□□□□□ -1.24
UBR4-202ENST00000375224 A0A1W2PNR3 127 aa7.29□□□□□ -1.24
UBR4-202ENST00000375224 SIGLEC5O15389 551 aa7.29□□□□□ -1.24
UBR4-202ENST00000375224 XRCC3O43542 346 aa7.29□□□□□ -1.24
UBR4-202ENST00000375224 CBR3O75828 277 aa7.29□□□□□ -1.24
UBR4-202ENST00000375224 PGA4P0DJD7 388 aa7.29□□□□□ -1.24
UBR4-202ENST00000375224 PGA3P0DJD8 388 aa7.29□□□□□ -1.24
UBR4-202ENST00000375224 LIFP15018 202 aa7.29□□□□□ -1.24
UBR4-202ENST00000375224 SFTPDP35247 375 aa7.29□□□□□ -1.24
UBR4-202ENST00000375224 SRP9P49458 86 aaKnown RBP7.29□□□□□ -1.24
UBR4-202ENST00000375224 CLDN12P56749 244 aa7.29□□□□□ -1.24
UBR4-202ENST00000375224 CSNK2A1P68400 391 aaPredicted RBP7.29□□□□□ -1.24
UBR4-202ENST00000375224 LPAL2Q16609 132 aa7.29□□□□□ -1.24
UBR4-202ENST00000375224 FOXRED1Q96CU9 486 aaPredicted RBP7.29□□□□□ -1.24
UBR4-202ENST00000375224 ELMOD3Q96FG2 381 aa7.29□□□□□ -1.24
UBR4-202ENST00000375224 EMC6Q9BV81 110 aa7.29□□□□□ -1.24
UBR4-202ENST00000375224 DDA1Q9BW61 102 aa7.29□□□□□ -1.24
UBR4-202ENST00000375224 TOLLIPQ9H0E2 274 aa7.29□□□□□ -1.24
UBR4-202ENST00000375224 OR51J1Q9H342 316 aa7.29□□□□□ -1.24
UBR4-202ENST00000375224 TMEM185BQ9H7F4 350 aa7.29□□□□□ -1.24
UBR4-202ENST00000375224 MOB1AQ9H8S9 216 aa7.29□□□□□ -1.24
UBR4-202ENST00000375224 SH2D2AQ9NP31 389 aa7.29□□□□□ -1.24
UBR4-202ENST00000375224 CENPMQ9NSP4 180 aa7.29□□□□□ -1.24
UBR4-202ENST00000375224 GOLT1BQ9Y3E0 138 aa7.29□□□□□ -1.24
UBR4-202ENST00000375224 A0A087WV48 116 aa7.29□□□□□ -1.24
UBR4-202ENST00000375224 TRAF3IP2O43734 574 aaPredicted RBP7.29□□□□□ -1.24
UBR4-202ENST00000375224 HPP00738 406 aa7.29□□□□□ -1.24
UBR4-202ENST00000375224 IFNA10P01566 189 aa7.29□□□□□ -1.24
UBR4-202ENST00000375224 CELA2AP08217 269 aa7.29□□□□□ -1.24
UBR4-202ENST00000375224 QDPRP09417 244 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms