RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 FNDC9Q8TBE3 224 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 UBASH3BQ8TF42 649 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 SSC4DQ8WTU2 575 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 EXO5Q9H790 373 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 ZNF221Q9UK13 617 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 RAB22AQ9UL26 194 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 TIMM10BQ9Y5J6 103 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 MYO7BQ6PIF6 2116 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 TRAV18A0A075B6X5 111 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 C5orf63A6NC05 138 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 SULT1C2O00338 296 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 ALX3O95076 343 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 MT-ND4P03905 459 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 PTHLHP12272 177 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 QRFPP83859 136 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 TBRG1Q3YBR2 411 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 ZNF774Q6NX45 483 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 BTN2A1Q7KYR7 527 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 ZNF627Q7L945 461 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 SLC16A14Q7RTX9 510 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 OR2H1Q9GZK4 316 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 OR10A2Q9H208 303 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 NUDT15Q9NV35 164 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 TAS2R8Q9NYW2 309 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 ATPIF1Q9UII2 106 aa15.76■□□□□ 0.11
HLA-DQB1-201ENST00000374943 TRGV5A0A0B4J1U4 118 aa15.75■□□□□ 0.11
HLA-DQB1-201ENST00000374943 C7orf66A4D0T2 115 aa15.75■□□□□ 0.11
HLA-DQB1-201ENST00000374943 DHRS7CA6NNS2 312 aa15.75■□□□□ 0.11
HLA-DQB1-201ENST00000374943 FARS2O95363 451 aaKnown RBP15.75■□□□□ 0.11
HLA-DQB1-201ENST00000374943 DHFRP00374 187 aa15.75■□□□□ 0.11
HLA-DQB1-201ENST00000374943 DBHP09172 617 aa15.75■□□□□ 0.11
HLA-DQB1-201ENST00000374943 ZNF93P35789 620 aaPredicted RBP15.75■□□□□ 0.11
HLA-DQB1-201ENST00000374943 CAMK2BQ13554 666 aa15.75■□□□□ 0.11
HLA-DQB1-201ENST00000374943 RSPO4Q2I0M5 234 aaPredicted RBP15.75■□□□□ 0.11
HLA-DQB1-201ENST00000374943 GFOD2Q3B7J2 385 aa15.75■□□□□ 0.11
HLA-DQB1-201ENST00000374943 RNFT1Q5M7Z0 435 aa15.75■□□□□ 0.11
HLA-DQB1-201ENST00000374943 ATAD3CQ5T2N8 411 aa15.75■□□□□ 0.11
HLA-DQB1-201ENST00000374943 UTS2BQ765I0 119 aa15.75■□□□□ 0.11
HLA-DQB1-201ENST00000374943 TUSC5Q8IXB3 177 aa15.75■□□□□ 0.11
HLA-DQB1-201ENST00000374943 FDCSPQ8NFU4 85 aa15.75■□□□□ 0.11
HLA-DQB1-201ENST00000374943 PP6455Q8WZ26 134 aa15.75■□□□□ 0.11
HLA-DQB1-201ENST00000374943 SLC7A10Q9NS82 523 aa15.75■□□□□ 0.11
HLA-DQB1-201ENST00000374943 ZNF891A8MT65 544 aaPredicted RBP15.74■□□□□ 0.11
HLA-DQB1-201ENST00000374943 MTRF1O75570 445 aaKnown RBP15.74■□□□□ 0.11
HLA-DQB1-201ENST00000374943 RBBP9O75884 186 aa15.74■□□□□ 0.11
HLA-DQB1-201ENST00000374943 YES1P07947 543 aa15.74■□□□□ 0.11
HLA-DQB1-201ENST00000374943 MMP7P09237 267 aaPredicted RBP15.74■□□□□ 0.11
HLA-DQB1-201ENST00000374943 CSF1P09603 554 aa15.74■□□□□ 0.11
HLA-DQB1-201ENST00000374943 PRF1P14222 555 aa15.74■□□□□ 0.11
HLA-DQB1-201ENST00000374943 PRSS3P35030 304 aa15.74■□□□□ 0.11
HLA-DQB1-201ENST00000374943 CCL11P51671 97 aa15.74■□□□□ 0.11
HLA-DQB1-201ENST00000374943 PSG4Q00888 419 aa15.74■□□□□ 0.11
HLA-DQB1-201ENST00000374943 CLN3Q13286 438 aa15.74■□□□□ 0.11
HLA-DQB1-201ENST00000374943 RAB12Q6IQ22 244 aa15.74■□□□□ 0.11
HLA-DQB1-201ENST00000374943 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.74■□□□□ 0.11
HLA-DQB1-201ENST00000374943 OR2W3Q7Z3T1 314 aa15.74■□□□□ 0.11
HLA-DQB1-201ENST00000374943 SKA3Q8IX90 412 aa15.74■□□□□ 0.11
HLA-DQB1-201ENST00000374943 WDYHV1Q96HA8 205 aa15.74■□□□□ 0.11
HLA-DQB1-201ENST00000374943 NUDT16L1Q9BRJ7 211 aaKnown RBP15.74■□□□□ 0.11
HLA-DQB1-201ENST00000374943 PRRG4Q9BZD6 226 aa15.74■□□□□ 0.11
HLA-DQB1-201ENST00000374943 ACTR6Q9GZN1 396 aa15.74■□□□□ 0.11
HLA-DQB1-201ENST00000374943 WNT5BQ9H1J7 359 aa15.74■□□□□ 0.11
HLA-DQB1-201ENST00000374943 SCPEP1Q9HB40 452 aa15.74■□□□□ 0.11
HLA-DQB1-201ENST00000374943 TNRC6AQ8NDV7 1962 aaKnown RBP15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 SCGNO76038 276 aa15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 CCR6P51684 374 aa15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 PMPCAQ10713 525 aa15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 UNC119Q13432 240 aa15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 CHMP1BQ7LBR1 199 aa15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 PAQR4Q8N4S7 273 aaPredicted RBP15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 OR56B4Q8NH76 319 aa15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 GPX8Q8TED1 209 aa15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 DEFB127Q9H1M4 99 aa15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 LDAHQ9H6V9 325 aa15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 CALHM2Q9HA72 323 aa15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 GP6Q9HCN6 339 aa15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 MRPL15Q9P015 296 aaKnown RBP15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 SPRR3Q9UBC9 169 aa15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 ZNF391Q9UJN7 358 aa15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 METTL21EPA6NDL7 271 aa15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 TMEM14DPA8MWL7 114 aa15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 ZNF587BE7ETH6 402 aa15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 GMDSO60547 372 aa15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 CEACAM4O75871 244 aa15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 IGHG3P01860 377 aa15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 HTR5AP47898 357 aa15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 RRAS2P62070 204 aaPredicted RBP15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 SNAI3Q3KNW1 292 aa15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 TMEM255AQ5JRV8 349 aa15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 CHST5Q9GZS9 411 aa15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 ZNF224Q9NZL3 707 aa15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 CSAG2Q9Y5P2 127 aa15.73■□□□□ 0.11
HLA-DQB1-201ENST00000374943 MED12LQ86YW9 2145 aa15.72■□□□□ 0.11
HLA-DQB1-201ENST00000374943 NCOR2Q9Y618 2525 aa15.72■□□□□ 0.11
HLA-DQB1-201ENST00000374943 TRAV6A0A075B6T7 132 aa15.72■□□□□ 0.11
HLA-DQB1-201ENST00000374943 IGKV1-9A0A0C4DH69 117 aa15.72■□□□□ 0.11
HLA-DQB1-201ENST00000374943 LPLP06858 475 aa15.72■□□□□ 0.11
HLA-DQB1-201ENST00000374943 H2AFB2P0C5Z0 115 aa15.72■□□□□ 0.11
HLA-DQB1-201ENST00000374943 VSIG8P0DPA2 414 aa15.72■□□□□ 0.11
HLA-DQB1-201ENST00000374943 FAUP35544 74 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms