RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 DPPA2Q7Z7J5 298 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 COMMD2Q86X83 199 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 OR5AS1Q8N127 324 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 PAQR4Q8N4S7 273 aaPredicted RBP13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 SAMD12Q8N8I0 201 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 TP63Q9H3D4 680 aaPredicted RBP13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 PPP1R3EQ9H7J1 279 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 LIN7BQ9HAP6 207 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 CYSLTR2Q9NS75 346 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 SPTA1P02549 2419 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 IGKV1-9A0A0C4DH69 117 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 IL2RAP01589 272 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 ZNF14P17017 642 aaPredicted RBP13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 PRSS12P56730 875 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 P2RY14Q15391 338 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 TMEM53Q6P2H8 277 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 CRIP3Q6Q6R5 217 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 PCSK4Q6UW60 755 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 NCCRP1Q6ZVX7 275 aaPredicted RBP13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 CXorf67Q86X51 503 aaPredicted RBP13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 OR1M1Q8NGA1 313 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 SPSB4Q96A44 273 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 SLC25A38Q96DW6 304 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 REEP6Q96HR9 211 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 ZFP3Q96NJ6 502 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 OCEL1Q9H607 264 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 CKLFQ9UBR5 152 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 CGGBP1Q9UFW8 167 aaPredicted RBP13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 C5orf49A4QMS7 147 aa13.6□□□□□ -0.23
NIPAL3-204ENST00000374399 FABP12A6NFH5 140 aa13.6□□□□□ -0.23
NIPAL3-204ENST00000374399 SLC17A2O00624 439 aa13.6□□□□□ -0.23
NIPAL3-204ENST00000374399 PRRG2O14669 202 aa13.6□□□□□ -0.23
NIPAL3-204ENST00000374399 TMEM127O75204 238 aa13.6□□□□□ -0.23
NIPAL3-204ENST00000374399 CELA3BP08861 270 aa13.6□□□□□ -0.23
NIPAL3-204ENST00000374399 HOXD11P31277 338 aaPredicted RBP13.6□□□□□ -0.23
NIPAL3-204ENST00000374399 PSMD7P51665 324 aa13.6□□□□□ -0.23
NIPAL3-204ENST00000374399 TGFBR3Q03167 851 aa13.6□□□□□ -0.23
NIPAL3-204ENST00000374399 ZNF92Q03936 586 aa13.6□□□□□ -0.23
NIPAL3-204ENST00000374399 EIF2S3LQ2VIR3 472 aaKnown RBP13.6□□□□□ -0.23
NIPAL3-204ENST00000374399 C16orf87Q6PH81 154 aa13.6□□□□□ -0.23
NIPAL3-204ENST00000374399 LRRC28Q86X40 367 aaPredicted RBP13.6□□□□□ -0.23
NIPAL3-204ENST00000374399 C1orf162Q8NEQ5 155 aaPredicted RBP13.6□□□□□ -0.23
NIPAL3-204ENST00000374399 OR4M1Q8NGD0 313 aa13.6□□□□□ -0.23
NIPAL3-204ENST00000374399 OR52N4Q8NGI2 321 aa13.6□□□□□ -0.23
NIPAL3-204ENST00000374399 OR13C9Q8NGT0 318 aa13.6□□□□□ -0.23
NIPAL3-204ENST00000374399 SSC4DQ8WTU2 575 aa13.6□□□□□ -0.23
NIPAL3-204ENST00000374399 A0A0G2JNJ9 132 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 hCG_38984A0A1B0GV85 526 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 UPK1BO75841 260 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 SERPINA5P05154 406 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 FAHP16930 419 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 GNALP38405 381 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 WNT5AP41221 380 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 FAM3AP98173 230 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 C1orf100Q5SVJ3 147 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 DTX3Q8N9I9 347 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 OR5D14Q8NGL3 314 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 SFXN3Q9BWM7 321 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 Q9UFV3 132 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 STEAP1Q9UHE8 339 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 CIB4A0PJX0 185 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 MEGF11A6BM72 1044 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 TMEM8BA6NDV4 472 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 NGFP01138 241 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 APOA1P02647 267 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 CALCBP10092 127 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 ZNF12P17014 697 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 ZNF20P17024 532 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 BDKRB2P30411 391 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 PMPCAQ10713 525 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 P2RY6Q15077 328 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 BAK1Q16611 211 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 DMRTC1Q5HYR2 192 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 FAM131AQ6UXB0 335 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 BIVMQ86UB2 503 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 CCDC36Q8IYA8 594 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 ZNF101Q8IZC7 436 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 ZNF671Q8TAW3 534 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 NANOS1Q8WY41 292 aaKnown RBP13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 KCNK15Q9H427 330 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 POFUT1Q9H488 388 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 TMEM138Q9NPI0 162 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 EXTL2Q9UBQ6 330 aa13.59□□□□□ -0.23
NIPAL3-204ENST00000374399 HOXB1P14653 301 aaPredicted RBP13.58□□□□□ -0.24
NIPAL3-204ENST00000374399 RAB3AP20336 220 aa13.58□□□□□ -0.24
NIPAL3-204ENST00000374399 CCNOP22674 350 aa13.58□□□□□ -0.24
NIPAL3-204ENST00000374399 AZGP1P25311 298 aaKnown RBP13.58□□□□□ -0.24
NIPAL3-204ENST00000374399 THBS4P35443 961 aa13.58□□□□□ -0.24
NIPAL3-204ENST00000374399 PLP2Q04941 152 aa13.58□□□□□ -0.24
NIPAL3-204ENST00000374399 RIN1Q13671 783 aa13.58□□□□□ -0.24
NIPAL3-204ENST00000374399 UBE2V2Q15819 145 aa13.58□□□□□ -0.24
NIPAL3-204ENST00000374399 GLT8D1Q68CQ7 371 aa13.58□□□□□ -0.24
NIPAL3-204ENST00000374399 XKRXQ6PP77 449 aa13.58□□□□□ -0.24
NIPAL3-204ENST00000374399 METAP1DQ6UB28 335 aaPredicted RBP13.58□□□□□ -0.24
NIPAL3-204ENST00000374399 CMTM4Q8IZR5 234 aa13.58□□□□□ -0.24
NIPAL3-204ENST00000374399 NKAIN3Q8N8D7 197 aa13.58□□□□□ -0.24
NIPAL3-204ENST00000374399 CCDC54Q8NEL0 328 aa13.58□□□□□ -0.24
NIPAL3-204ENST00000374399 OR51D1Q8NGF3 324 aa13.58□□□□□ -0.24
NIPAL3-204ENST00000374399 OR4D6Q8NGJ1 314 aa13.58□□□□□ -0.24
NIPAL3-204ENST00000374399 CMTM3Q96MX0 182 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms