RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 EMC6Q9BV81 110 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 ZNF732B4DXR9 585 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 RNASEK-C17orf49H0YIS7 233 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 ALOX5APP20292 161 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 KIAA0040Q15053 153 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 TMEM97Q5BJF2 176 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 ZNF628Q5EBL2 1059 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 ZNF683Q8IZ20 524 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 SPOCK3Q9BQ16 436 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 NEURL2Q9BR09 285 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 NDFIP1Q9BT67 221 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 PTDSS2Q9BVG9 487 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 PPIL1Q9Y3C6 166 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 FOCADQ5VW36 1801 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 IGLV3-16A0A075B6K0 115 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 FRG2CA6NGY1 282 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 ENSAO43768 121 aaKnown RBP12.87□□□□□ -0.35
LMX1B-202ENST00000373474 QDPRP09417 244 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 SFTA3P0C7M3 94 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 FAM234AQ9H0X4 552 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 TXNIPQ9H3M7 391 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 MMP26Q9NRE1 261 aa12.87□□□□□ -0.35
LMX1B-202ENST00000373474 NXPH2O95156 264 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 CEACAM5P06731 702 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 DHODHQ02127 395 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 ZNF528Q3MIS6 628 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 GALNT16Q8N428 558 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 TBX19O60806 448 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 GLAP06280 429 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 CST2P09228 141 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 CSF2RBP32927 897 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 ETFDHQ16134 617 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 GGNBP1Q5YKI7 109 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 SLC16A12Q6ZSM3 486 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 LHFPL2Q6ZUX7 228 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 LYG2Q86SG7 212 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 SMIM4Q8WVI0 70 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 ST8SIA1Q92185 356 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 ZNF2Q9BSG1 426 aaPredicted RBP12.86□□□□□ -0.35
LMX1B-202ENST00000373474 MMP17Q9ULZ9 603 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 ELOA3CA0A087WX78 387 aaPredicted RBP12.86□□□□□ -0.35
LMX1B-202ENST00000373474 hCG_1809904A0A1W2PP81 198 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 A0A1W2PPE2 198 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 A0A1W2PR64 198 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 A0A1W2PRV1 198 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 RRASP10301 218 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 ST6GAL1P15907 406 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 PCMT1P22061 227 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 CCR2P41597 374 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 CCR5P51681 352 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 PCBP4P57723 403 aaKnown RBP12.86□□□□□ -0.35
LMX1B-202ENST00000373474 CLPPQ16740 277 aaPredicted RBP12.86□□□□□ -0.35
LMX1B-202ENST00000373474 Q3ZCU0 254 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 BTLAQ7Z6A9 289 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 FBXL6Q8N531 539 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 OR10P1Q8NGE3 313 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 PATE1Q8WXA2 126 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 CIB3Q96Q77 187 aaPredicted RBP12.86□□□□□ -0.35
LMX1B-202ENST00000373474 TRAPPC1Q9Y5R8 145 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 SHROOM3Q8TF72 1996 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 ANKRD61A6NGH8 418 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 DBX1A6NMT0 343 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 GSTP1P09211 210 aaKnown RBP12.86□□□□□ -0.35
LMX1B-202ENST00000373474 CRYBB2P43320 205 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 NOVA1P51513 510 aaKnown RBP12.86□□□□□ -0.35
LMX1B-202ENST00000373474 IGSF11Q5DX21 431 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 ASTLQ6HA08 431 aaPredicted RBP12.86□□□□□ -0.35
LMX1B-202ENST00000373474 DHRS11Q6UWP2 260 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 TFAP2EQ6VUC0 442 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 WDFY2Q96P53 400 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 PLSCR3Q9NRY6 295 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 FLVCR1Q9Y5Y0 555 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 CD3DP04234 171 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 RBP2P50120 134 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 TBC1D28Q2M2D7 210 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 HMGCLL1Q8TB92 370 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 POMT2Q9UKY4 750 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 SLC17A4Q9Y2C5 497 aa12.86□□□□□ -0.35
LMX1B-202ENST00000373474 PPP2CBP62714 309 aa12.85□□□□□ -0.35
LMX1B-202ENST00000373474 PPP2CAP67775 309 aa12.85□□□□□ -0.35
LMX1B-202ENST00000373474 FBXW5Q969U6 566 aa12.85□□□□□ -0.35
LMX1B-202ENST00000373474 NOL4LQ96MY1 436 aaPredicted RBP12.85□□□□□ -0.35
LMX1B-202ENST00000373474 PBOV1Q9GZY1 135 aa12.85□□□□□ -0.35
LMX1B-202ENST00000373474 SLCO1C1Q9NYB5 712 aa12.85□□□□□ -0.35
LMX1B-202ENST00000373474 KCNE3Q9Y6H6 103 aa12.85□□□□□ -0.35
LMX1B-202ENST00000373474 BPIFB3P59826 476 aa12.85□□□□□ -0.35
LMX1B-202ENST00000373474 ZNF154Q13106 437 aa12.85□□□□□ -0.35
LMX1B-202ENST00000373474 CCL4L1Q8NHW4 92 aa12.85□□□□□ -0.35
LMX1B-202ENST00000373474 BARHL1Q9BZE3 327 aa12.85□□□□□ -0.35
LMX1B-202ENST00000373474 WSB2Q9NYS7 404 aaPredicted RBP12.85□□□□□ -0.35
LMX1B-202ENST00000373474 AMTP48728 403 aa12.85□□□□□ -0.35
LMX1B-202ENST00000373474 UBE2MP61081 183 aaKnown RBP12.85□□□□□ -0.35
LMX1B-202ENST00000373474 SNRPNP63162 240 aaKnown RBP12.85□□□□□ -0.35
LMX1B-202ENST00000373474 SLC38A9Q8NBW4 561 aa12.85□□□□□ -0.35
LMX1B-202ENST00000373474 OR52N5Q8NH56 324 aa12.85□□□□□ -0.35
LMX1B-202ENST00000373474 HLA-CQ95604 372 aa12.85□□□□□ -0.35
LMX1B-202ENST00000373474 EXOGQ9Y2C4 368 aaKnown RBP12.85□□□□□ -0.35
LMX1B-202ENST00000373474 SIT1Q9Y3P8 196 aa12.85□□□□□ -0.35
LMX1B-202ENST00000373474 IL5P05113 134 aa12.85□□□□□ -0.35
LMX1B-202ENST00000373474 EDN3P14138 238 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms