RNA–Protein interactions for RNA: ENST00000372405.1

PTPRF-202, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-202ENST00000372405 FUOMA2VDF0 154 aa12□□□□□ -0.49
PTPRF-202ENST00000372405 EEF1E1O43324 174 aaKnown RBP12□□□□□ -0.49
PTPRF-202ENST00000372405 SULT1B1O43704 296 aa12□□□□□ -0.49
PTPRF-202ENST00000372405 DHRS3O75911 302 aa12□□□□□ -0.49
PTPRF-202ENST00000372405 MPGP29372 298 aa12□□□□□ -0.49
PTPRF-202ENST00000372405 MMP15P51511 669 aa12□□□□□ -0.49
PTPRF-202ENST00000372405 TNK1Q13470 666 aa12□□□□□ -0.49
PTPRF-202ENST00000372405 SLC36A2Q495M3 483 aa12□□□□□ -0.49
PTPRF-202ENST00000372405 DMRTC1Q5HYR2 192 aa12□□□□□ -0.49
PTPRF-202ENST00000372405 RPUSD3Q6P087 351 aaKnown RBP12□□□□□ -0.49
PTPRF-202ENST00000372405 TFAP2EQ6VUC0 442 aa12□□□□□ -0.49
PTPRF-202ENST00000372405 YIPF5Q969M3 257 aa12□□□□□ -0.49
PTPRF-202ENST00000372405 CNTD2Q9H8S5 307 aa12□□□□□ -0.49
PTPRF-202ENST00000372405 GLRX2Q9NS18 164 aa12□□□□□ -0.49
PTPRF-202ENST00000372405 TBCCD1Q9NVR7 557 aa12□□□□□ -0.49
PTPRF-202ENST00000372405 INTS1Q8N201 2190 aaKnown RBP12□□□□□ -0.49
PTPRF-202ENST00000372405 LDLRAD4O15165 306 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 FAHP16930 419 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 RAB3AP20336 220 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 ACKR3P25106 362 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 PRSS12P56730 875 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 TBR1Q16650 682 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 RNASE12Q5GAN4 147 aaKnown RBP11.99□□□□□ -0.49
PTPRF-202ENST00000372405 MTFR2Q6P444 385 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 CRIP3Q6Q6R5 217 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 BAIAP2L2Q6UXY1 529 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 FAM214BQ7L5A3 538 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 OR1K1Q8NGR3 316 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 SSC4DQ8WTU2 575 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 EXTL1Q92935 676 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 RFT1Q96AA3 541 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 S100A16Q96FQ6 103 aaKnown RBP11.99□□□□□ -0.49
PTPRF-202ENST00000372405 SPACA5Q96QH8 159 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 OR10A2Q9H208 303 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 TP53TG5Q9Y2B4 290 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 OR14I1A6ND48 311 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 CTDSPLO15194 276 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 CTAG2O75638 210 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 KDM4BO94953 1096 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 LCATP04180 440 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 CD3GP09693 182 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 PTHLHP12272 177 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 KIR2DL2P43627 348 aaPredicted RBP11.99□□□□□ -0.49
PTPRF-202ENST00000372405 BCAP31P51572 246 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 HIKESHIQ53FT3 197 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 ANKRD16Q6P6B7 361 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 SEM1Q6ZVN7 128 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 ZNF584Q8IVC4 421 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 CELF2-AS1Q8N7Q2 184 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 C19orf18Q8NEA5 215 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 BCL2L2Q92843 193 aaPredicted RBP11.99□□□□□ -0.49
PTPRF-202ENST00000372405 WNT2BQ93097 391 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 METTL17Q9H7H0 456 aaPredicted RBP11.99□□□□□ -0.49
PTPRF-202ENST00000372405 AUNIPQ9H7T9 357 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 RNF121Q9H920 327 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 PLEKHA1Q9HB21 404 aa11.99□□□□□ -0.49
PTPRF-202ENST00000372405 CIB4A0PJX0 185 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 FAM157BP0CG42 384 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 EDN3P14138 238 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 ARSBP15848 533 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 PITPNAQ00169 270 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 FOXF2Q12947 444 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 TMEM69Q5SWH9 247 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 OR10K2Q6IF99 312 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 PGAP1Q75T13 922 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 SMIM4Q8WVI0 70 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 FOXRED1Q96CU9 486 aaPredicted RBP11.98□□□□□ -0.49
PTPRF-202ENST00000372405 REEP6Q96HR9 211 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 SORCS2Q96PQ0 1159 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 MYEF2Q9P2K5 600 aaKnown RBP11.98□□□□□ -0.49
PTPRF-202ENST00000372405 ATPIF1Q9UII2 106 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 PIGLQ9Y2B2 252 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 MAP1BP46821 2468 aaKnown RBP11.98□□□□□ -0.49
PTPRF-202ENST00000372405 AHRRA9YTQ3 701 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 GSTZ1O43708 216 aaPredicted RBP11.98□□□□□ -0.49
PTPRF-202ENST00000372405 CD79AP11912 226 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 CCL2P13500 99 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 MNDAP41218 407 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 KIR2DL3P43628 341 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 SRP9P49458 86 aaKnown RBP11.98□□□□□ -0.49
PTPRF-202ENST00000372405 TAS2R20P59543 309 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 RAB1AP62820 205 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 QRFPP83859 136 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 UBE2V2Q15819 145 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 ZNF585AQ6P3V2 769 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 VWA1Q6PCB0 445 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 COLCA1Q6ZS62 124 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 CADM3Q8N126 398 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 GPR137Q96N19 417 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 UQCC2Q9BRT2 126 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 C1QTNF5Q9BXJ0 243 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 SLC22A4Q9H015 551 aa11.98□□□□□ -0.49
PTPRF-202ENST00000372405 LYRM1O43325 122 aa11.97□□□□□ -0.49
PTPRF-202ENST00000372405 XRCC3O43542 346 aa11.97□□□□□ -0.49
PTPRF-202ENST00000372405 IGHV1-2P23083 117 aa11.97□□□□□ -0.49
PTPRF-202ENST00000372405 THBS4P35443 961 aa11.97□□□□□ -0.49
PTPRF-202ENST00000372405 ZNF93P35789 620 aaPredicted RBP11.97□□□□□ -0.49
PTPRF-202ENST00000372405 ZNF92Q03936 586 aa11.97□□□□□ -0.49
PTPRF-202ENST00000372405 NSUN5P2Q63ZY6 315 aa11.97□□□□□ -0.49
PTPRF-202ENST00000372405 ZNF57Q68EA5 555 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms