RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 NLGN4YQ8NFZ3 816 aaPredicted RBP3.39□□□□□ -1.87
MCF2-203ENST00000370576 RHOXF1Q8NHV9 184 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 PHF21AQ96BD5 680 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 KCTD14Q9BQ13 255 aaPredicted RBP3.39□□□□□ -1.87
MCF2-203ENST00000370576 SOSTQ9BQB4 213 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 TCEAL2Q9H3H9 227 aaPredicted RBP3.39□□□□□ -1.87
MCF2-203ENST00000370576 NIPAL2Q9H841 368 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 TBC1D17Q9HA65 648 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 ZNF226Q9NYT6 803 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 PTTG3PQ9NZH4 202 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 L3MBTL1Q9Y468 752 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 TESMINQ9Y4I5 508 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 TIMM10BQ9Y5J6 103 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 A0A0A0MQY5 61 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 PLPP3O14495 311 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 SYNGR4O95473 234 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 ADRA2AP08913 450 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 CPMP14384 443 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 BCKDHBP21953 392 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 SSTR5P35346 364 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 KIR2DS4P43632 304 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 ZNF84P51523 738 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 OR10A3P58181 314 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 EIF3IQ13347 325 aaKnown RBP3.39□□□□□ -1.87
MCF2-203ENST00000370576 RTP5Q14D33 572 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 SLC9A3R2Q15599 337 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 GLYR1Q49A26 553 aaPredicted RBP3.39□□□□□ -1.87
MCF2-203ENST00000370576 SLC25A47Q6Q0C1 308 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 RD3Q7Z3Z2 195 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 CLECL1Q8IZS7 167 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 RNF175Q8N4F7 328 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 PRR26Q8N8Z3 221 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 CCL4L1Q8NHW4 92 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 ABHD4Q8TB40 342 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 ADAMTS17Q8TE56 1095 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 GEMIN6Q8WXD5 167 aaKnown RBP3.39□□□□□ -1.87
MCF2-203ENST00000370576 C11orf40Q8WZ69 217 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 UCN3Q969E3 161 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 C10orf35Q96D05 121 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 NRTNQ99748 197 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 CTPS2Q9NRF8 586 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 ING3Q9NXR8 418 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 COA3Q9Y2R0 106 aaPredicted RBP3.39□□□□□ -1.87
MCF2-203ENST00000370576 TANC2Q9HCD6 1990 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 TEX13DA0A0J9YY54 714 aaPredicted RBP3.39□□□□□ -1.87
MCF2-203ENST00000370576 A0A1B0GTW7 788 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 TUBAL3A6NHL2 446 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 AIREO43918 545 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 SSX4O60224 188 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 PAK4O96013 591 aaPredicted RBP3.39□□□□□ -1.87
MCF2-203ENST00000370576 H2AFB1P0C5Y9 115 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 CT45A8P0DMV1 189 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 CT45A9P0DMV2 189 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 DUTP33316 252 aaKnown RBP3.39□□□□□ -1.87
MCF2-203ENST00000370576 SOX2P48431 317 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 CSNK1A1P48729 337 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 PSG6Q00889 435 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 DOC2BQ14184 412 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 RSPO4Q2I0M5 234 aaPredicted RBP3.39□□□□□ -1.87
MCF2-203ENST00000370576 TIGD2Q4W5G0 525 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 CT45A2Q5DJT8 189 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 OR2T5Q6IEZ7 315 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 ZNF613Q6PF04 617 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 SLC36A1Q7Z2H8 476 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 GPAT4Q86UL3 456 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 ZFP82Q8N141 532 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 ZNF808Q8N4W9 903 aaPredicted RBP3.39□□□□□ -1.87
MCF2-203ENST00000370576 RAB42Q8N4Z0 105 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 PXT1Q8NFP0 134 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 OR52H1Q8NGJ2 320 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 OR2T29Q8NH02 315 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 BAALCQ8WXS3 180 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 ZBED6CLQ96FA7 236 aaPredicted RBP3.39□□□□□ -1.87
MCF2-203ENST00000370576 ALKBH3Q96Q83 286 aaPredicted RBP3.39□□□□□ -1.87
MCF2-203ENST00000370576 DUSP23Q9BVJ7 150 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 FAM60AQ9NP50 221 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 MIOXQ9UGB7 285 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 TAC3Q9UHF0 121 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 PRELID3BQ9Y3B1 194 aa3.39□□□□□ -1.87
MCF2-203ENST00000370576 ARHGEF17Q96PE2 2063 aaPredicted RBP3.38□□□□□ -1.87
MCF2-203ENST00000370576 TRAV8-7A0A075B6U6 113 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 TRAV24A0A0B4J272 114 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 A0A0B4J2E0 115 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 PRAMEF33A0A0G2JMD5 474 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 A0A1B0GX12 115 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 CDHR4A6H8M9 788 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 SLC22A20A6NK97 555 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 OR11H12B2RN74 326 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 H0YGG7 62 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 PRAMEF10O60809 474 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 UMODP07911 640 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 RFPL3SP0C7P2 107 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 CSNK2A2P19784 350 aaPredicted RBP3.38□□□□□ -1.87
MCF2-203ENST00000370576 FPR3P25089 353 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 RPL10P27635 214 aaKnown RBP3.38□□□□□ -1.87
MCF2-203ENST00000370576 P2RY1P47900 373 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 GLIPR1P48060 266 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 ZNF121P58317 390 aaPredicted RBP3.38□□□□□ -1.87
MCF2-203ENST00000370576 MVKQ03426 396 aa3.38□□□□□ -1.87
MCF2-203ENST00000370576 STX4Q12846 297 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms