RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 SMIM7Q9BQ49 75 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 CRLF2Q9HC73 371 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 RPH3ALQ9UNE2 315 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 NEU3Q9UQ49 428 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 CXorf51AA0A1B0GTR3 108 aa14.36□□□□□ -0.11
COL17A1-202ENST00000369733 A0A1B0GX78 115 aa14.36□□□□□ -0.11
COL17A1-202ENST00000369733 ZNF814B7Z6K7 855 aa14.36□□□□□ -0.11
COL17A1-202ENST00000369733 CEACAM5P06731 702 aa14.36□□□□□ -0.11
COL17A1-202ENST00000369733 TRILQ7L0X0 811 aa14.36□□□□□ -0.11
COL17A1-202ENST00000369733 PHOSPHO2Q8TCD6 241 aa14.36□□□□□ -0.11
COL17A1-202ENST00000369733 HGDQ93099 445 aa14.36□□□□□ -0.11
COL17A1-202ENST00000369733 LHX4Q969G2 390 aa14.36□□□□□ -0.11
COL17A1-202ENST00000369733 UBL7Q96S82 380 aaPredicted RBP14.36□□□□□ -0.11
COL17A1-202ENST00000369733 TEX101Q9BY14 249 aa14.36□□□□□ -0.11
COL17A1-202ENST00000369733 RAB18Q9NP72 206 aa14.36□□□□□ -0.11
COL17A1-202ENST00000369733 RYDENQ9NUL5 291 aaKnown RBP14.36□□□□□ -0.11
COL17A1-202ENST00000369733 GDF2Q9UK05 429 aaPredicted RBP14.36□□□□□ -0.11
COL17A1-202ENST00000369733 RNF150Q9ULK6 438 aa14.36□□□□□ -0.11
COL17A1-202ENST00000369733 TMPRSS7Q7RTY8 843 aa14.36□□□□□ -0.11
COL17A1-202ENST00000369733 KCNJ15Q99712 375 aa14.36□□□□□ -0.11
COL17A1-202ENST00000369733 BOKQ9UMX3 212 aaPredicted RBP14.36□□□□□ -0.11
COL17A1-202ENST00000369733 ABCA3Q99758 1704 aa14.36□□□□□ -0.11
COL17A1-202ENST00000369733 HS3ST1O14792 307 aa14.36□□□□□ -0.11
COL17A1-202ENST00000369733 NXPH2O95156 264 aa14.36□□□□□ -0.11
COL17A1-202ENST00000369733 SPANXN5Q5MJ07 72 aa14.36□□□□□ -0.11
COL17A1-202ENST00000369733 OR10D4PQ8NGN7 298 aa14.36□□□□□ -0.11
COL17A1-202ENST00000369733 C4orf45Q96LM5 186 aa14.36□□□□□ -0.11
COL17A1-202ENST00000369733 TRIP11Q15643 1979 aa14.36□□□□□ -0.11
COL17A1-202ENST00000369733 A0A1B0GTH9 108 aa14.36□□□□□ -0.11
COL17A1-202ENST00000369733 MPPED1O15442 326 aa14.36□□□□□ -0.11
COL17A1-202ENST00000369733 PLGLAQ15195 96 aa14.36□□□□□ -0.11
COL17A1-202ENST00000369733 MRM1Q6IN84 353 aaKnown RBP14.36□□□□□ -0.11
COL17A1-202ENST00000369733 HEYLQ9NQ87 328 aaPredicted RBP14.36□□□□□ -0.11
COL17A1-202ENST00000369733 KCNIP2Q9NS61 270 aa14.36□□□□□ -0.11
COL17A1-202ENST00000369733 M0R135 149 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 OR8U8P0C7N1 319 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 FAM24BQ8N5W8 94 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 SPPL3Q8TCT6 385 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 ZNF799Q96GE5 643 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 TMEM218A2RU14 115 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 ALOX12BO75342 701 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 FABP4P15090 132 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 SCGB2A2Q13296 93 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 DBX2Q6ZNG2 339 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 LHFPL2Q6ZUX7 228 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 ZNF429Q86V71 674 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 ERVH48-1M5A8F1 160 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 GLAP06280 429 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 ZNF121P58317 390 aaPredicted RBP14.35□□□□□ -0.11
COL17A1-202ENST00000369733 MOGAT2Q3SYC2 334 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 NCR3LG1Q68D85 454 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 LAIR1Q6GTX8 287 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 CMBLQ96DG6 245 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 ARFGEF1Q9Y6D6 1849 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 A0A1W2PNR3 127 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 SFT2D2O95562 160 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 IGF2P01344 180 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 SNCAP37840 140 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 METAP1P53582 386 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 KLF9Q13886 244 aaPredicted RBP14.35□□□□□ -0.11
COL17A1-202ENST00000369733 ENDOGQ14249 297 aaKnown RBP14.35□□□□□ -0.11
COL17A1-202ENST00000369733 FXNQ16595 210 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 CLEC12BQ2HXU8 276 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 CATSPERDQ86XM0 798 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 STPG2Q8N412 459 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 ASB16Q96NS5 453 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 DUSP23Q9BVJ7 150 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 OBP2AQ9NY56 170 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 GHRLQ9UBU3 117 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 LHX6Q9UPM6 363 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 F6UZH7 168 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 DEGS1O15121 323 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 ZFP36L2P47974 494 aaKnown RBP14.35□□□□□ -0.11
COL17A1-202ENST00000369733 CST9Q5W186 159 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 ST8SIA1Q92185 356 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 OPA3Q9H6K4 179 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 MMP25Q9NPA2 562 aa14.35□□□□□ -0.11
COL17A1-202ENST00000369733 ARG2P78540 354 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 ZNF528Q3MIS6 628 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 IGSF11Q5DX21 431 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 DMRTC1Q5HYR2 192 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 PHYHD1Q5SRE7 291 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 CBLN2Q8IUK8 224 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 ALG14Q96F25 216 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 TRMT61AQ96FX7 289 aaKnown RBP14.34□□□□□ -0.11
COL17A1-202ENST00000369733 FAM234AQ9H0X4 552 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 CALHM2Q9HA72 323 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 SLC52A3Q9NQ40 469 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 V9GYS6 101 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 SERPINE3A8MV23 424 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 OR2J2O76002 312 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 GPANK1O95872 356 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 CCR2P41597 374 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 RAB32Q13637 225 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 PWWP2BQ6NUJ5 590 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 SYT13Q7L8C5 426 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 DNAJB12Q9NXW2 375 aaKnown RBP14.34□□□□□ -0.11
COL17A1-202ENST00000369733 OPN4Q9UHM6 478 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 BTBD17A6NE02 478 aa14.34□□□□□ -0.11
COL17A1-202ENST00000369733 ARPC3O15145 178 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms