RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 GTF2A1P52655 376 aaPredicted RBP11.88□□□□□ -0.51
TPM3-211ENST00000368531 WDR38Q5JTN6 314 aa11.88□□□□□ -0.51
TPM3-211ENST00000368531 CRYBG3Q68DQ2 2970 aa11.88□□□□□ -0.51
TPM3-211ENST00000368531 CATSPERDQ86XM0 798 aa11.88□□□□□ -0.51
TPM3-211ENST00000368531 ELMOD2Q8IZ81 293 aa11.88□□□□□ -0.51
TPM3-211ENST00000368531 SYS1Q8N2H4 156 aa11.88□□□□□ -0.51
TPM3-211ENST00000368531 PRSS35Q8N3Z0 413 aa11.88□□□□□ -0.51
TPM3-211ENST00000368531 OR2G2Q8NGZ5 317 aa11.88□□□□□ -0.51
TPM3-211ENST00000368531 OR51E1Q8TCB6 317 aa11.88□□□□□ -0.51
TPM3-211ENST00000368531 RNF166Q96A37 237 aaPredicted RBP11.88□□□□□ -0.51
TPM3-211ENST00000368531 REPIN1Q9BWE0 567 aaKnown RBP11.88□□□□□ -0.51
TPM3-211ENST00000368531 DUSP21Q9H596 190 aa11.88□□□□□ -0.51
TPM3-211ENST00000368531 CXorf56Q9H5V9 222 aa11.88□□□□□ -0.51
TPM3-211ENST00000368531 GPR84Q9NQS5 396 aa11.88□□□□□ -0.51
TPM3-211ENST00000368531 FRRS1LQ9P0K9 344 aa11.88□□□□□ -0.51
TPM3-211ENST00000368531 NUFIP1Q9UHK0 495 aaKnown RBP11.88□□□□□ -0.51
TPM3-211ENST00000368531 GPR160Q9UJ42 338 aa11.88□□□□□ -0.51
TPM3-211ENST00000368531 BLOC1S6Q9UL45 172 aa11.88□□□□□ -0.51
TPM3-211ENST00000368531 HRNRQ86YZ3 2850 aaPredicted RBP11.87□□□□□ -0.51
TPM3-211ENST00000368531 HECTD1Q9ULT8 2610 aa11.87□□□□□ -0.51
TPM3-211ENST00000368531 PLSCR5A0PG75 271 aa11.87□□□□□ -0.51
TPM3-211ENST00000368531 CD300LBA8K4G0 201 aa11.87□□□□□ -0.51
TPM3-211ENST00000368531 CYSRT1A8MQ03 144 aa11.87□□□□□ -0.51
TPM3-211ENST00000368531 NDUFS7O75251 213 aa11.87□□□□□ -0.51
TPM3-211ENST00000368531 KITLGP21583 273 aa11.87□□□□□ -0.51
TPM3-211ENST00000368531 KIR3DL2P43630 455 aa11.87□□□□□ -0.51
TPM3-211ENST00000368531 GSK3AP49840 483 aa11.87□□□□□ -0.51
TPM3-211ENST00000368531 NANOS3P60323 173 aaKnown RBP11.87□□□□□ -0.51
TPM3-211ENST00000368531 FAM3AP98173 230 aa11.87□□□□□ -0.51
TPM3-211ENST00000368531 ALKBH1Q13686 389 aaKnown RBP11.87□□□□□ -0.51
TPM3-211ENST00000368531 MOGQ16653 247 aa11.87□□□□□ -0.51
TPM3-211ENST00000368531 XAF1Q6GPH4 301 aa11.87□□□□□ -0.51
TPM3-211ENST00000368531 RDH10Q8IZV5 341 aa11.87□□□□□ -0.51
TPM3-211ENST00000368531 ZFP41Q8N8Y5 198 aa11.87□□□□□ -0.51
TPM3-211ENST00000368531 OR56B2PQ8NGI1 322 aa11.87□□□□□ -0.51
TPM3-211ENST00000368531 IGFBPL1Q8WX77 278 aa11.87□□□□□ -0.51
TPM3-211ENST00000368531 SPSB4Q96A44 273 aa11.87□□□□□ -0.51
TPM3-211ENST00000368531 PERPQ96FX8 193 aa11.87□□□□□ -0.51
TPM3-211ENST00000368531 MOB1AQ9H8S9 216 aa11.87□□□□□ -0.51
TPM3-211ENST00000368531 ERGIC3Q9Y282 383 aa11.87□□□□□ -0.51
TPM3-211ENST00000368531 AKAP6Q13023 2319 aa11.86□□□□□ -0.51
TPM3-211ENST00000368531 PNMA8CA0A1B0GUJ8 204 aa11.86□□□□□ -0.51
TPM3-211ENST00000368531 hCG_38984A0A1B0GV85 526 aa11.86□□□□□ -0.51
TPM3-211ENST00000368531 ZSCAN5BA6NJL1 495 aa11.86□□□□□ -0.51
TPM3-211ENST00000368531 IQCF6A8MYZ5 107 aa11.86□□□□□ -0.51
TPM3-211ENST00000368531 OVOL3O00110 214 aa11.86□□□□□ -0.51
TPM3-211ENST00000368531 SELEP16581 610 aa11.86□□□□□ -0.51
TPM3-211ENST00000368531 CFL1P23528 166 aaKnown RBP11.86□□□□□ -0.51
TPM3-211ENST00000368531 ZNF81P51508 661 aa11.86□□□□□ -0.51
TPM3-211ENST00000368531 CDH15P55291 814 aa11.86□□□□□ -0.51
TPM3-211ENST00000368531 TSTQ16762 297 aaKnown RBP11.86□□□□□ -0.51
TPM3-211ENST00000368531 NANOGP1Q8N7R0 232 aa11.86□□□□□ -0.51
TPM3-211ENST00000368531 OR52N1Q8NH53 320 aa11.86□□□□□ -0.51
TPM3-211ENST00000368531 SORCS2Q96PQ0 1159 aa11.86□□□□□ -0.51
TPM3-211ENST00000368531 MS4A5Q9H3V2 200 aa11.86□□□□□ -0.51
TPM3-211ENST00000368531 RGCCQ9H4X1 137 aa11.86□□□□□ -0.51
TPM3-211ENST00000368531 BABAM2Q9NXR7 383 aa11.86□□□□□ -0.51
TPM3-211ENST00000368531 ITGB1BP2Q9UKP3 347 aa11.86□□□□□ -0.51
TPM3-211ENST00000368531 CHD3Q12873 2000 aaKnown RBP11.86□□□□□ -0.51
TPM3-211ENST00000368531 TRBV2A0A0J9YWF9 115 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 A0A0U1RQV5 110 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 A0A1B0GVI7 797 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 A6NIN4 97 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 H0YL77 283 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 TPD52L2O43399 206 aaKnown RBP11.85□□□□□ -0.51
TPM3-211ENST00000368531 LY6HO94772 140 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 LALBAP00709 142 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 HLA-DPB1P04440 258 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 MAGEB1P43366 347 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 MAP2K4P45985 399 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 PPOXP50336 477 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 MMP15P51511 669 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 ATP5J2P56134 94 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 WNT4P56705 351 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 TNK1Q13470 666 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 MED22Q15528 200 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 DEFB113Q30KQ7 82 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 FDX2Q6P4F2 183 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 Q6ZR03 302 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 PRSS48Q7RTY5 328 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 ZNF676Q8N7Q3 588 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 OR8G5Q8NG78 346 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 OR2Z1Q8NG97 314 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 DVL3Q92997 716 aaPredicted RBP11.85□□□□□ -0.51
TPM3-211ENST00000368531 TRMT61AQ96FX7 289 aaKnown RBP11.85□□□□□ -0.51
TPM3-211ENST00000368531 OR5M11Q96RB7 305 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 PDCD1LG2Q9BQ51 273 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 MND1Q9BWT6 205 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 CDCA4Q9BXL8 241 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 RAB1BQ9H0U4 201 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 OPA3Q9H6K4 179 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 TMEM100Q9NV29 134 aa11.85□□□□□ -0.51
TPM3-211ENST00000368531 SIRT4Q9Y6E7 314 aaPredicted RBP11.85□□□□□ -0.51
TPM3-211ENST00000368531 DCHS2Q6V1P9 2916 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 A0A1B0GTI1 187 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 OR4C45A6NMZ5 311 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 ANKRD30BLA7E2S9 258 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 C17orf100A8MU93 164 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 SYT7O43581 403 aa11.84□□□□□ -0.51
TPM3-211ENST00000368531 LMX1BO60663 402 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms