RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 MELTFP08582 738 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 OCLNQ16625 522 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 C11orf91Q3C1V1 193 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 TEX30Q5JUR7 227 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 ZNF770Q6IQ21 691 aaPredicted RBP13.27□□□□□ -0.29
CKS1B-202ENST00000368436 LYPD4Q6UWN0 246 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 DCXRQ7Z4W1 244 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 ZDHHC21Q8IVQ6 265 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 LINC00471Q8N535 108 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 GCSAMQ8N6F7 178 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 BOLLQ8N9W6 283 aaKnown RBP13.27□□□□□ -0.29
CKS1B-202ENST00000368436 SLC37A3Q8NCC5 494 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 OR52L1Q8NGH7 329 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 OR51L1Q8NGJ5 315 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 OR4C15Q8NGM1 316 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 OR4F5Q8NH21 305 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 WDFY2Q96P53 400 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 CDRT15Q96T59 188 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 KCNJ15Q99712 375 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 BTBD10Q9BSF8 475 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 CHIAQ9BZP6 476 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 TRIM15Q9C019 465 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 MMADHCQ9H3L0 296 aaPredicted RBP13.27□□□□□ -0.29
CKS1B-202ENST00000368436 OPA3Q9H6K4 179 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 C1orf123Q9NWV4 160 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 LYVE1Q9Y5Y7 322 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 COMMD3-BMI1R4GMX3 469 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 SNX3O60493 162 aa13.26□□□□□ -0.29
CKS1B-202ENST00000368436 FCN3O75636 299 aa13.26□□□□□ -0.29
CKS1B-202ENST00000368436 NDUFA7O95182 113 aa13.26□□□□□ -0.29
CKS1B-202ENST00000368436 GRPP07492 148 aa13.26□□□□□ -0.29
CKS1B-202ENST00000368436 RELBQ01201 579 aa13.26□□□□□ -0.29
CKS1B-202ENST00000368436 PDCD1Q15116 288 aa13.26□□□□□ -0.29
CKS1B-202ENST00000368436 OR8B8Q15620 311 aa13.26□□□□□ -0.29
CKS1B-202ENST00000368436 FIP1L1Q6UN15 594 aaKnown RBP13.26□□□□□ -0.29
CKS1B-202ENST00000368436 ZNF826PQ6ZT77 177 aa13.26□□□□□ -0.29
CKS1B-202ENST00000368436 RASSF6Q6ZTQ3 369 aa13.26□□□□□ -0.29
CKS1B-202ENST00000368436 PNLDC1Q8NA58 520 aaKnown RBP13.26□□□□□ -0.29
CKS1B-202ENST00000368436 OR9Q2Q8NGE9 314 aa13.26□□□□□ -0.29
CKS1B-202ENST00000368436 OR8D4Q8NGM9 314 aa13.26□□□□□ -0.29
CKS1B-202ENST00000368436 WFDC12Q8WWY7 111 aa13.26□□□□□ -0.29
CKS1B-202ENST00000368436 SPSB4Q96A44 273 aa13.26□□□□□ -0.29
CKS1B-202ENST00000368436 SLAMF6Q96DU3 332 aa13.26□□□□□ -0.29
CKS1B-202ENST00000368436 NMNAT2Q9BZQ4 307 aa13.26□□□□□ -0.29
CKS1B-202ENST00000368436 SIRPDQ9H106 197 aa13.26□□□□□ -0.29
CKS1B-202ENST00000368436 RASSF4Q9H2L5 321 aa13.26□□□□□ -0.29
CKS1B-202ENST00000368436 MARCH7Q9H992 704 aa13.26□□□□□ -0.29
CKS1B-202ENST00000368436 BEX1Q9HBH7 125 aa13.26□□□□□ -0.29
CKS1B-202ENST00000368436 C1RLQ9NZP8 487 aa13.26□□□□□ -0.29
CKS1B-202ENST00000368436 KIF17Q9P2E2 1029 aa13.26□□□□□ -0.29
CKS1B-202ENST00000368436 POMT1Q9Y6A1 747 aa13.26□□□□□ -0.29
CKS1B-202ENST00000368436 XRCC2O43543 280 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 KNG1P01042 644 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 GASTP01350 101 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 GYPAP02724 150 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 CRYBA1P05813 215 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 SPARCP09486 303 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 DDOSTP39656 456 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 ENTPD1P49961 510 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 PRKXP51817 358 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 RAG2P55895 527 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 MZT1Q08AG7 82 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 SPATS1Q496A3 300 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 METTL11BQ5VVY1 283 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 TEX36Q5VZQ5 186 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 FAM90A1Q86YD7 464 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 C11orf53Q8IXP5 236 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 LNX2Q8N448 690 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 KIR3DL3Q8N743 410 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 ZNF511Q8NB15 262 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 OR56B2PQ8NGI1 322 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 GATAD2BQ8WXI9 593 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 COPS4Q9BT78 406 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 TNFRSF19Q9NS68 423 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 ACOXLQ9NUZ1 547 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 C14orf119Q9NWQ9 140 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 KAAG1Q9UBP8 84 aa13.25□□□□□ -0.29
CKS1B-202ENST00000368436 IGHV1-69DA0A0B4J2H0 117 aa13.24□□□□□ -0.29
CKS1B-202ENST00000368436 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.24□□□□□ -0.29
CKS1B-202ENST00000368436 ZNF878C9JN71 531 aa13.24□□□□□ -0.29
CKS1B-202ENST00000368436 TNFRSF11BO00300 401 aa13.24□□□□□ -0.29
CKS1B-202ENST00000368436 ZNF593O00488 134 aaPredicted RBP13.24□□□□□ -0.29
CKS1B-202ENST00000368436 ECDO95905 644 aaPredicted RBP13.24□□□□□ -0.29
CKS1B-202ENST00000368436 IGHV1-69P01742 117 aa13.24□□□□□ -0.29
CKS1B-202ENST00000368436 SLC2A1P11166 492 aa13.24□□□□□ -0.29
CKS1B-202ENST00000368436 FMO3P31513 532 aa13.24□□□□□ -0.29
CKS1B-202ENST00000368436 SLC25A1P53007 311 aa13.24□□□□□ -0.29
CKS1B-202ENST00000368436 RPL15P61313 204 aaKnown RBP13.24□□□□□ -0.29
CKS1B-202ENST00000368436 SRSF4Q08170 494 aaKnown RBP13.24□□□□□ -0.29
CKS1B-202ENST00000368436 CRMP1Q14194 572 aa13.24□□□□□ -0.29
CKS1B-202ENST00000368436 TAF13Q15543 124 aa13.24□□□□□ -0.29
CKS1B-202ENST00000368436 PDLIM3Q53GG5 364 aaPredicted RBP13.24□□□□□ -0.29
CKS1B-202ENST00000368436 OLFML2AQ68BL7 652 aa13.24□□□□□ -0.29
CKS1B-202ENST00000368436 BTN2A1Q7KYR7 527 aa13.24□□□□□ -0.29
CKS1B-202ENST00000368436 OR9Q1Q8NGQ5 310 aa13.24□□□□□ -0.29
CKS1B-202ENST00000368436 OR4Q3Q8NH05 313 aa13.24□□□□□ -0.29
CKS1B-202ENST00000368436 RNPEPL1Q9HAU8 725 aa13.24□□□□□ -0.29
CKS1B-202ENST00000368436 CENPMQ9NSP4 180 aa13.24□□□□□ -0.29
CKS1B-202ENST00000368436 CLPSL1A2RUU4 121 aa13.23□□□□□ -0.29
CKS1B-202ENST00000368436 A6NLC8 198 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms