RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 OR1N2Q8NGR9 330 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 NDFIP1Q9BT67 221 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 MYH2Q9UKX2 1941 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 F13BP05160 661 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 SMIM10L2AP0DMW4 78 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 SMIM10L2BP0DMW5 78 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 EDNRBP24530 442 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 CD82P27701 267 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF140P52738 457 aaPredicted RBP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 IRF3Q14653 427 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 CTXN3Q4LDR2 81 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF429Q86V71 674 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 MKXQ8IYA7 352 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 OR9G4Q8NGQ1 327 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 WNT2BQ93097 391 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF160Q9HCG1 818 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 RNF222A6NCQ9 220 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 RIMKLAQ8IXN7 391 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 BRWD1Q9NSI6 2320 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 HYAL3O43820 417 aaPredicted RBP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 DDTP30046 118 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 AGTRAPQ6RW13 159 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 ACER3Q9NUN7 267 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 DOK5Q9P104 306 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 MAP1LC3B2A6NCE7 125 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 H3BQ15 152 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 DUSP11O75319 330 aaKnown RBP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 ABOP16442 354 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 EN2P19622 333 aaPredicted RBP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 IFITM2Q01629 132 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 ADAT3Q96EY9 351 aaPredicted RBP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 HMCESQ96FZ2 354 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 MAP1LC3BQ9GZQ8 125 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 GDF2Q9UK05 429 aaPredicted RBP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 LINC00587B1AMM8 73 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 CDKN2DP55273 166 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 TP53I3Q53FA7 332 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 FAM3DQ96BQ1 224 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 FAM221AA4D161 298 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF766Q5HY98 468 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 NBPF12Q5TAG4 269 aaPredicted RBP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 GPR21Q99679 349 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 ALKBH4Q9NXW9 302 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 LRP6O75581 1613 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 KIF1AQ12756 1690 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 KBTBD11-OT1A0A1B0GTJ5 212 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 DPP4P27487 766 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 NCBP2-AS2Q69YL0 99 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 PDLIM7Q9NR12 457 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 SLC17A2O00624 439 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 RBMXL2O75526 392 aaKnown RBP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 OR2C1O95371 312 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 HIST1H1EP10412 219 aaKnown RBP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 GPR18Q14330 331 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 ATXN7L3Q14CW9 347 aaPredicted RBP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 Q6ZPB1 254 aaPredicted RBP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 ATOH8Q96SQ7 321 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 LHX3Q9UBR4 397 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 NCBP2LA6PVI3 153 aaKnown RBP3.4□□□□□ -1.86
SYNE1-207ENST00000367255 OR2H2O95918 312 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 MOGAT3Q86VF5 341 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 TPSD1Q9BZJ3 242 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 AK3Q9UIJ7 227 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 KCNE5Q9UJ90 142 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 IGKV6D-21A0A0A0MT36 114 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 BEX5Q5H9J7 111 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF582Q96NG8 517 aaPredicted RBP3.4□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF226Q9NYT6 803 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 IGLV3-22A0A075B6J6 115 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 A0A0U1RQF3 1178 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 GJA4P35212 333 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 NHLRC3Q5JS37 347 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 Q6ZS92 163 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 SSMEM1Q8WWF3 244 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 MS4A6AQ9H2W1 248 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 PITX3O75364 302 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 SOD1P00441 154 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 ATXN1LP0C7T5 689 aaKnown RBP3.4□□□□□ -1.86
SYNE1-207ENST00000367255 SCGB2B2Q4G0G5 96 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 DUSP23Q9BVJ7 150 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 SUV39H2Q9H5I1 410 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 NPDC1Q9NQX5 325 aaPredicted RBP3.4□□□□□ -1.86
SYNE1-207ENST00000367255 SLC6A13Q9NSD5 602 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 MED29Q9NX70 200 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 ZFP30Q9Y2G7 519 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 APOBEC1P41238 236 aaKnown RBP3.4□□□□□ -1.86
SYNE1-207ENST00000367255 NCBP2P52298 156 aaKnown RBP eCLIP3.4□□□□□ -1.86
SYNE1-207ENST00000367255 ADAMTSL4Q6UY14 1074 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF595Q8IYB9 648 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 DEFB106AQ8N104 65 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 TMEM269A0A1B0GVZ9 245 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 PIRO00625 290 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 OR2J2O76002 312 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 IGFBP6P24592 240 aaPredicted RBP3.4□□□□□ -1.86
SYNE1-207ENST00000367255 CNR2P34972 360 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 JSRP1Q96MG2 331 aaPredicted RBP3.4□□□□□ -1.86
SYNE1-207ENST00000367255 M0QZQ0 153 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 CLEC12AQ5QGZ9 265 aa3.4□□□□□ -1.86
SYNE1-207ENST00000367255 SPATA31B1PQ5VZV4 182 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms