RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 M0R135 149 aa10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 CDC42EP2O14613 210 aa10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 DOK2O60496 412 aa10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 CISD3P0C7P0 127 aa10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 LYSMD4Q5XG99 296 aa10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 GCDHQ92947 438 aaPredicted RBP10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 ZNF799Q96GE5 643 aa10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 ALX4Q9H161 411 aaPredicted RBP10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 LMAN1LQ9HAT1 526 aa10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 ELF5Q9UKW6 265 aaPredicted RBP10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 LY86O95711 162 aa10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 TCN2P20062 427 aa10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 CCR2P41597 374 aa10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 DHODHQ02127 395 aa10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 LRRC18Q8N456 261 aa10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 LINC01555Q8NAE3 123 aa10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 PTX4Q96A99 478 aa10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 PCED1AQ9H1Q7 454 aa10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 PLK3Q9H4B4 646 aa10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 ZNF407Q9C0G0 2248 aa10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 CEBPZOSA8MTT3 80 aa10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 GCH1P30793 250 aa10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 ASTLQ6HA08 431 aaPredicted RBP10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 RPUSD3Q6P087 351 aaKnown RBP10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 OR4D6Q8NGJ1 314 aa10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 Q6ZRG5 221 aa10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 NUDCD2Q8WVJ2 157 aa10.65□□□□□ -0.7
CDC42BPA-202ENST00000366764 OR6C68A6NDL8 312 aa10.65□□□□□ -0.71
CDC42BPA-202ENST00000366764 STMND1H3BQB6 276 aa10.65□□□□□ -0.71
CDC42BPA-202ENST00000366764 PWWP2BQ6NUJ5 590 aa10.65□□□□□ -0.71
CDC42BPA-202ENST00000366764 FAAP20Q6NZ36 180 aa10.65□□□□□ -0.71
CDC42BPA-202ENST00000366764 ZNF2Q9BSG1 426 aaPredicted RBP10.65□□□□□ -0.71
CDC42BPA-202ENST00000366764 LIN7CQ9NUP9 197 aaKnown RBP10.65□□□□□ -0.71
CDC42BPA-202ENST00000366764 ZNF705GA8MUZ8 300 aaPredicted RBP10.65□□□□□ -0.71
CDC42BPA-202ENST00000366764 TMEM41BQ5BJD5 291 aa10.65□□□□□ -0.71
CDC42BPA-202ENST00000366764 SHISA6Q6ZSJ9 500 aa10.65□□□□□ -0.71
CDC42BPA-202ENST00000366764 C10orf111Q8N326 155 aa10.65□□□□□ -0.71
CDC42BPA-202ENST00000366764 WWTR1Q9GZV5 400 aa10.65□□□□□ -0.71
CDC42BPA-202ENST00000366764 PCDHGA5Q9Y5G8 931 aa10.65□□□□□ -0.71
CDC42BPA-202ENST00000366764 ANKUB1A6NFN9 424 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 PPP5D1E7EU14 171 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 HNF4GQ14541 408 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 BORCS7Q96B45 105 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 NTNG2Q96CW9 530 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 PTDSS2Q9BVG9 487 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 SLC6A17Q9H1V8 727 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 S100A7P31151 101 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 GPR3P46089 330 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 DVL1P1P54792 670 aaPredicted RBP10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 CARD18P57730 90 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 OR51E1Q8TCB6 317 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 SPSB1Q96BD6 273 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 IFT22Q9H7X7 185 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 WNT11O96014 354 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 ENPP1P22413 925 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 CALCRP30988 508 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 AK3Q9UIJ7 227 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 LRP12Q9Y561 859 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 CCSO14618 274 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 ABHD16AO95870 558 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 LIMS1P48059 325 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 ZFP82Q8N141 532 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 OR5M9Q8NGP3 310 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 MARCH1Q8TCQ1 289 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 TPSD1Q9BZJ3 242 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 OR14J1Q9UGF5 321 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 GDF2Q9UK05 429 aaPredicted RBP10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 ALG1L2C9J202 215 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 AKR7A3O95154 331 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 FOXK1P85037 733 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 PHLDA2Q53GA4 152 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 OPA3Q9H6K4 179 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 RHOFQ9HBH0 211 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 TIMM10BQ9Y5J6 103 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 ITGB8P26012 769 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 SNRPNP63162 240 aaKnown RBP10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 BVESQ8NE79 360 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 OR2A5Q96R48 311 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 USF3Q68DE3 2245 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 FNDC1Q4ZHG4 1894 aaPredicted RBP10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 IDSB3KWA1 339 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 PRICKLE3O43900 615 aaPredicted RBP10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 ACTL6BO94805 426 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 KCNJ3P48549 501 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 SFRP5Q5T4F7 317 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 SSX9Q7RTT3 188 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 ZNF223Q9UK11 482 aaPredicted RBP10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 HELZP42694 1942 aaKnown RBP10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 XRCC2O43543 280 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 MPC2O95563 127 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 OR5H8P0DN80 308 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 THBS4P35443 961 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 PJVKQ0ZLH3 352 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 TMEM65Q6PI78 240 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 THSD4Q6ZMP0 1018 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 LURAP1Q96LR2 239 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 CIB3Q96Q77 187 aaPredicted RBP10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 NMES1Q9C002 83 aa10.64□□□□□ -0.71
CDC42BPA-202ENST00000366764 ZG16BQ96DA0 208 aa10.63□□□□□ -0.71
CDC42BPA-202ENST00000366764 SCN5AQ14524 2016 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms