RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 ZNF257Q9Y2Q1 563 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 KPTNQ9Y664 436 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 IGSF9BQ9UPX0 1349 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 SBNO1A3KN83 1393 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 PTPRTO14522 1441 aa2.3□□□□□ -2.04
RNU6-28P-201ENST00000362378 SMIM26A0A096LP01 95 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 A0A0B4J2E0 115 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 GSTTP1A0A1W2PQM5 241 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 ZNF705GA8MUZ8 300 aaPredicted RBP2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 KRBOX1C9JBD0 128 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 TNFRSF11BO00300 401 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 TAAR5O14804 337 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 RAD51BO15315 384 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 SPOPO43791 374 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 MED6O75586 246 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 APCSP02743 223 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 HOXB8P17481 243 aaPredicted RBP2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 AZU1P20160 251 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 IVDP26440 423 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 CD70P32970 193 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 UBE2E1P51965 193 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 KRTAP12-2P59991 146 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 PSMC5P62195 406 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 CACNG7P62955 275 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 CRADDP78560 199 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 RPL18AQ02543 176 aaKnown RBP2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 LRRC63Q05C16 580 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 SMUG1Q53HV7 270 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 ZNF691Q5VV52 312 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 C16orf87Q6PH81 154 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 Q6ZVH6 145 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 SNX20Q7Z614 316 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 RAB43Q86YS6 212 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 DAW1Q8N136 415 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 FAM58AQ8N1B3 248 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 UBAC2Q8NBM4 344 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 C19orf18Q8NEA5 215 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 OR4K5Q8NGD3 323 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 OR4A15Q8NGL6 344 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 OR13C9Q8NGT0 318 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 OR8D1Q8WZ84 308 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 FLYWCH2Q96CP2 140 aaKnown RBP2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 ZNF414Q96IQ9 312 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 UBE2E2Q96LR5 201 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 ZNF382Q96SR6 550 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 ARMC7Q9H6L4 198 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 ZNF430Q9H8G1 570 aaPredicted RBP2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 ADA2Q9NZK5 511 aa2.29□□□□□ -2.04
RNU6-28P-201ENST00000362378 TRAV19A0A0A6YYK7 116 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 B4GALT5O43286 388 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 GMDSO60547 372 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 GLSO94925 669 aaPredicted RBP2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 LCA5LO95447 670 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 THRAP10827 490 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 PTNP21246 168 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 POLR2IP36954 125 aaKnown RBP2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 TALDO1P37837 337 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 TAS2R46P59540 309 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 PFN3P60673 137 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 CDK5Q00535 292 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 PTGES3Q15185 160 aaKnown RBP2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 STK11Q15831 433 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 MPV17L2Q567V2 206 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 TFDP3Q5H9I0 405 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 SLC25A25Q6KCM7 469 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 NANOGP8Q6NSW7 305 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 RTL4Q6ZR62 310 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 NDUFAF7Q7L592 441 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 BHLHA15Q7RTS1 189 aaPredicted RBP2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 WDFY1Q8IWB7 410 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 UBALD2Q8IYN6 164 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 ARHGAP18Q8N392 663 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 CSGALNACT2Q8N6G5 542 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 ASCC1Q8N9N2 400 aaKnown RBP2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 WDR31Q8NA23 367 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 TFGQ92734 400 aaPredicted RBP2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 FAM19A4Q96LR4 140 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 ZNF488Q96MN9 340 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 TMEM243Q9BU79 118 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 CHID1Q9BWS9 393 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 LZTFL1Q9NQ48 299 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 CES1P1Q9UKY3 287 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 FLVCR2Q9UPI3 526 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 YTHDF2Q9Y5A9 579 aaKnown RBP2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 OR51B2Q9Y5P1 312 aa2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 BZW2Q9Y6E2 419 aaKnown RBP2.28□□□□□ -2.04
RNU6-28P-201ENST00000362378 AQRO60306 1485 aaKnown RBP eCLIP2.27□□□□□ -2.05
RNU6-28P-201ENST00000362378 TNS2Q63HR2 1409 aa2.27□□□□□ -2.05
RNU6-28P-201ENST00000362378 RSPH10B2B2RC85 870 aa2.27□□□□□ -2.05
RNU6-28P-201ENST00000362378 LINC01619G3V211 115 aa2.27□□□□□ -2.05
RNU6-28P-201ENST00000362378 H0YJW9 148 aa2.27□□□□□ -2.05
RNU6-28P-201ENST00000362378 RBFOX2O43251 390 aaKnown RBP eCLIP2.27□□□□□ -2.05
RNU6-28P-201ENST00000362378 ZNF324O75467 553 aaPredicted RBP2.27□□□□□ -2.05
RNU6-28P-201ENST00000362378 PLEKHA8P1O95397 391 aa2.27□□□□□ -2.05
RNU6-28P-201ENST00000362378 HLA-DQA1P01909 254 aa2.27□□□□□ -2.05
RNU6-28P-201ENST00000362378 S100A9P06702 114 aaKnown RBP2.27□□□□□ -2.05
RNU6-28P-201ENST00000362378 IVLP07476 585 aa2.27□□□□□ -2.05
RNU6-28P-201ENST00000362378 OR56A5P0C7T3 313 aa2.27□□□□□ -2.05
RNU6-28P-201ENST00000362378 RSPH10BP0C881 870 aa2.27□□□□□ -2.05
RNU6-28P-201ENST00000362378 NUP62P37198 522 aaPredicted RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms