RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 VN1R1Q9GZP7 353 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 METTL17Q9H7H0 456 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-203ENST00000361654 FBXL2Q9UKC9 423 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 CCL21O00585 134 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 CTSLP07711 333 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 ZBTB25P24278 435 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 BSGP35613 385 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 TOMM34Q15785 309 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-203ENST00000361654 TAF9Q16594 264 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 PLA1AQ53H76 456 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 ZNF620Q6ZNG0 422 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 MN1Q10571 1320 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-203ENST00000361654 LY86O95711 162 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 TMPRSS3P57727 454 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 SMN1Q16637 294 aaKnown RBP9.88□□□□□ -0.83
CLIP1-203ENST00000361654 C4orf17Q53FE4 359 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 SPNS3Q6ZMD2 512 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 ANKRD37Q7Z713 158 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 CADM3Q8N126 398 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 SYS1Q8N2H4 156 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 OR4C3Q8NH37 302 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 DVL3Q92997 716 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-203ENST00000361654 TM4SF19Q96DZ7 209 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 ACOXLQ9NUZ1 547 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 TAAR3PQ9P1P4 343 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 UPK1AO00322 258 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 CCR9P51686 369 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 LOXL4Q96JB6 756 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 OR2A5Q96R48 311 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 HEXA-AS1Q9H8Q6 139 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 SEBOXQ9HB31 216 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-203ENST00000361654 TIAM2Q8IVF5 1701 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 FITM1A5D6W6 292 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 TMEM267Q0VDI3 215 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-203ENST00000361654 ZNF574Q6ZN55 896 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-203ENST00000361654 SIGLEC11Q96RL6 698 aa9.88□□□□□ -0.83
CLIP1-203ENST00000361654 A0A087WUJ7 227 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 GFRA3O60609 400 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 COX7A1P24310 79 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 RAB5CP51148 216 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 SLC17A1Q14916 467 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 IGFBP7Q16270 282 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 ZNF425Q6IV72 752 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 TCTE3Q8IZS6 198 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 GPX8Q8TED1 209 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 TRABD2BA6NFA1 517 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 ACTL6AO96019 429 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 RBP4P02753 201 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 ATF1P18846 271 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 KCNJ3P48549 501 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 RPL7L1Q6DKI1 246 aaKnown RBP9.87□□□□□ -0.83
CLIP1-203ENST00000361654 BHLHA15Q7RTS1 189 aaPredicted RBP9.87□□□□□ -0.83
CLIP1-203ENST00000361654 PARP16Q8N5Y8 322 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 SFT2D1Q8WV19 159 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 TNFRSF19Q9NS68 423 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 MYO5AQ9Y4I1 1855 aaKnown RBP9.87□□□□□ -0.83
CLIP1-203ENST00000361654 TMEM129A0AVI4 362 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 DBX1A6NMT0 343 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 SCO1O75880 301 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 IL5P05113 134 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 PRF1P14222 555 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 COX5AP20674 150 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 LGALS7P47929 136 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 RTP5Q14D33 572 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 SLC25A30Q5SVS4 291 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 TP53I13Q8NBR0 393 aaPredicted RBP9.87□□□□□ -0.83
CLIP1-203ENST00000361654 OR2Y1Q8NGV0 311 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 SPSB1Q96BD6 273 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 NIPSNAP1Q9BPW8 284 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 TMEM147Q9BVK8 224 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 TINAGL1Q9GZM7 467 aaPredicted RBP9.87□□□□□ -0.83
CLIP1-203ENST00000361654 MS4A5Q9H3V2 200 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 M0R1X1 148 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 CTDSP2O14595 271 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 SLC31A2O15432 143 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 ADAM20O43506 726 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 SCGB1D1O95968 90 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 CASP3P42574 277 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 ZNF121P58317 390 aaPredicted RBP9.87□□□□□ -0.83
CLIP1-203ENST00000361654 RHOBP62745 196 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 MFSD4AQ8N468 514 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 PLA2G2FQ9BZM2 168 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 TOPAZ1Q8N9V7 1692 aa9.87□□□□□ -0.83
CLIP1-203ENST00000361654 A0A1B0GTQ1 180 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 ANGPTL7O43827 346 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 ANKRD34CP0C6C1 535 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 AKR1C3P42330 323 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 LILRA6Q6PI73 481 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 PELI3Q8N2H9 469 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 ZNF441Q8N8Z8 693 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 OR4F17Q8NGA8 305 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 OR4F5Q8NH21 305 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 DYNC2LI1Q8TCX1 351 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 OR4F4Q96R69 305 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 A0A1W2PN81 502 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 TSTD3H0UI37 97 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 H0Y8G0 127 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 PPM1DO15297 605 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 FOSL1P15407 271 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 FCGR2CP31995 323 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms