RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 PTX4Q96A99 478 aa3.11□□□□□ -1.91
RPL39-201ENST00000361575 NEURL3Q96EH8 262 aa3.11□□□□□ -1.91
RPL39-201ENST00000361575 RNF170Q96K19 258 aa3.11□□□□□ -1.91
RPL39-201ENST00000361575 STMN4Q9H169 189 aaPredicted RBP3.11□□□□□ -1.91
RPL39-201ENST00000361575 IFI27L2Q9H2X8 130 aa3.11□□□□□ -1.91
RPL39-201ENST00000361575 TMEM27Q9HBJ8 222 aa3.11□□□□□ -1.91
RPL39-201ENST00000361575 CES1P1Q9UKY3 287 aa3.11□□□□□ -1.91
RPL39-201ENST00000361575 TBX21Q9UL17 535 aa3.11□□□□□ -1.91
RPL39-201ENST00000361575 SBNO1A3KN83 1393 aa3.11□□□□□ -1.91
RPL39-201ENST00000361575 JCADQ9P266 1359 aa3.11□□□□□ -1.91
RPL39-201ENST00000361575 DOCK9Q9BZ29 2069 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 IGLV1-50A0A075B6I6 118 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 LOC100506127A0A0U1RQW1 187 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 K7EN84 100 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 TRAPPC6AO75865 159 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 SEMA3DO95025 777 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 PTTG1O95997 202 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 GCGP01275 180 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 CCL2P13500 99 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 NOVP48745 357 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 HCCSP53701 268 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 AP1S2P56377 157 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 TAS2R46P59540 309 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 SLC35B1P78383 322 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 RPL18AQ02543 176 aaKnown RBP3.1□□□□□ -1.91
RPL39-201ENST00000361575 MECOMQ03112 1051 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 LOXL1Q08397 574 aaPredicted RBP3.1□□□□□ -1.91
RPL39-201ENST00000361575 OR1Q1Q15612 314 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 STK11Q15831 433 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 ATP6V1FQ16864 119 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 DEFB116Q30KQ4 102 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 Q3ZCU0 254 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 KDM4DQ6B0I6 523 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 Q6ZVH6 145 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 PRSS58Q8IYP2 241 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 SPERTQ8NA61 448 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 OR5W2Q8NH69 310 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 EXOSC8Q96B26 276 aaKnown RBP3.1□□□□□ -1.91
RPL39-201ENST00000361575 HAUS1Q96CS2 278 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 RCN3Q96D15 328 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 MSANTD3Q96H12 275 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 CENPNQ96H22 339 aaPredicted RBP3.1□□□□□ -1.91
RPL39-201ENST00000361575 RAB1BQ9H0U4 201 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 OR51B5Q9H339 312 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 OR52D1Q9H346 318 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 RBFOX1Q9NWB1 397 aaKnown RBP3.1□□□□□ -1.91
RPL39-201ENST00000361575 CTSFQ9UBX1 484 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 ZNF229Q9UJW7 825 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 GGA2Q9UJY4 613 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 ZNF222Q9UK12 451 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 TNS2Q63HR2 1409 aa3.1□□□□□ -1.91
RPL39-201ENST00000361575 A0A0A6YYD5 115 aa3.09□□□□□ -1.91
RPL39-201ENST00000361575 KRBOX1C9JBD0 128 aa3.09□□□□□ -1.91
RPL39-201ENST00000361575 LINC01619G3V211 115 aa3.09□□□□□ -1.91
RPL39-201ENST00000361575 M0QX08 132 aa3.09□□□□□ -1.91
RPL39-201ENST00000361575 DFFAO00273 331 aa3.09□□□□□ -1.91
RPL39-201ENST00000361575 SOCS1O15524 211 aa3.09□□□□□ -1.91
RPL39-201ENST00000361575 ZNF207O43670 478 aaKnown RBP3.09□□□□□ -1.91
RPL39-201ENST00000361575 LOXP28300 417 aaPredicted RBP3.09□□□□□ -1.91
RPL39-201ENST00000361575 HTR2CP28335 458 aa3.09□□□□□ -1.91
RPL39-201ENST00000361575 GNRHRP30968 328 aa3.09□□□□□ -1.91
RPL39-201ENST00000361575 KRTAP10-7P60409 375 aaPredicted RBP3.09□□□□□ -1.91
RPL39-201ENST00000361575 TCEAL5Q5H9L2 206 aa3.09□□□□□ -1.91
RPL39-201ENST00000361575 Q6P435 159 aa3.09□□□□□ -1.91
RPL39-201ENST00000361575 EPGNQ6UW88 154 aa3.09□□□□□ -1.91
RPL39-201ENST00000361575 NDUFAF7Q7L592 441 aa3.09□□□□□ -1.91
RPL39-201ENST00000361575 SYS1Q8N2H4 156 aa3.09□□□□□ -1.91
RPL39-201ENST00000361575 TMEM234Q8WY98 164 aa3.09□□□□□ -1.91
RPL39-201ENST00000361575 TCEAL3Q969E4 200 aa3.09□□□□□ -1.91
RPL39-201ENST00000361575 PDXPQ96GD0 296 aa3.09□□□□□ -1.91
RPL39-201ENST00000361575 CPB2Q96IY4 423 aa3.09□□□□□ -1.91
RPL39-201ENST00000361575 C18orf15Q96N68 181 aa3.09□□□□□ -1.91
RPL39-201ENST00000361575 TMEM243Q9BU79 118 aa3.09□□□□□ -1.91
RPL39-201ENST00000361575 ANKHQ9HCJ1 492 aa3.09□□□□□ -1.91
RPL39-201ENST00000361575 ZNF223Q9UK11 482 aaPredicted RBP3.09□□□□□ -1.91
RPL39-201ENST00000361575 CABIN1Q9Y6J0 2220 aa3.08□□□□□ -1.92
RPL39-201ENST00000361575 TMEM131Q92545 1883 aa3.08□□□□□ -1.92
RPL39-201ENST00000361575 IGKV6D-21A0A0A0MT36 114 aa3.08□□□□□ -1.92
RPL39-201ENST00000361575 LINC00854A0A1B0GVQ3 168 aa3.08□□□□□ -1.92
RPL39-201ENST00000361575 ZNF879B4DU55 563 aa3.08□□□□□ -1.92
RPL39-201ENST00000361575 CDC40O60508 579 aaKnown RBP eCLIP3.08□□□□□ -1.92
RPL39-201ENST00000361575 NEMFO60524 1076 aa3.08□□□□□ -1.92
RPL39-201ENST00000361575 RAD1O60671 282 aa3.08□□□□□ -1.92
RPL39-201ENST00000361575 REM1O75628 298 aa3.08□□□□□ -1.92
RPL39-201ENST00000361575 SLC25A14O95258 325 aaPredicted RBP3.08□□□□□ -1.92
RPL39-201ENST00000361575 SMC2O95347 1197 aa3.08□□□□□ -1.92
RPL39-201ENST00000361575 PGAM1P18669 254 aa3.08□□□□□ -1.92
RPL39-201ENST00000361575 CASQ1P31415 396 aa3.08□□□□□ -1.92
RPL39-201ENST00000361575 PPOXP50336 477 aa3.08□□□□□ -1.92
RPL39-201ENST00000361575 CRADDP78560 199 aa3.08□□□□□ -1.92
RPL39-201ENST00000361575 SNRNP35Q16560 246 aaKnown RBP3.08□□□□□ -1.92
RPL39-201ENST00000361575 C18orf21Q32NC0 220 aaPredicted RBP3.08□□□□□ -1.92
RPL39-201ENST00000361575 CPTPQ5TA50 214 aa3.08□□□□□ -1.92
RPL39-201ENST00000361575 TMPRSS11AQ6ZMR5 421 aa3.08□□□□□ -1.92
RPL39-201ENST00000361575 ZFP2Q6ZN57 461 aa3.08□□□□□ -1.92
RPL39-201ENST00000361575 RIMKLAQ8IXN7 391 aa3.08□□□□□ -1.92
RPL39-201ENST00000361575 PGAM4Q8N0Y7 254 aa3.08□□□□□ -1.92
RPL39-201ENST00000361575 OR10G2Q8NGC3 310 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms