RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 PCGF3Q3KNV8 242 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 FDX2Q6P4F2 183 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 PLXDC2Q6UX71 529 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 C3P1Q6ZMU1 363 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 LRRC69Q6ZNQ3 347 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 MRPL13Q9BYD1 178 aaKnown RBP11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 SLC17A5Q9NRA2 495 aa11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 COA3Q9Y2R0 106 aaPredicted RBP11.62□□□□□ -0.55
SQSTM1-201ENST00000360718 A0A1W2PPL8 197 aa11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 MKRN2OSH3BPM6 223 aa11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 SYNGR4O95473 234 aa11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 GPANK1O95872 356 aa11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 PGA4P0DJD7 388 aa11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 PGA3P0DJD8 388 aa11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 ZNF823P16415 610 aa11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 SSBP1Q04837 148 aaKnown RBP11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 ZNF169Q14929 603 aaPredicted RBP11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 OTPQ5XKR4 325 aa11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 CARD17Q5XLA6 110 aa11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 OTOSQ8NHW6 89 aa11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 TSEN15Q8WW01 171 aaKnown RBP11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 MCHR2Q969V1 340 aa11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 ZNF845Q96IR2 970 aaPredicted RBP11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 ZDHHC11Q9H8X9 412 aa11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 DSPP15924 2871 aaKnown RBP11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 TRAV8-7A0A075B6U6 113 aa11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 GGT3PA6NGU5 568 aa11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 K7ENP7 123 aa11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 RGS11O94810 467 aa11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 PTHLHP12272 177 aa11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 ADAM8P78325 824 aa11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 FMODQ06828 376 aa11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 ETFDHQ16134 617 aa11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 INO80CQ6PI98 192 aaPredicted RBP11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 KRT77Q7Z794 578 aa11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 ROBO4Q8WZ75 1007 aa11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 ELMOD3Q96FG2 381 aa11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 C4orf45Q96LM5 186 aa11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 GINS4Q9BRT9 223 aa11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 MCTS1Q9ULC4 181 aaKnown RBP11.61□□□□□ -0.55
SQSTM1-201ENST00000360718 TTLL8A6PVC2 850 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 MCRIP1C9JLW8 97 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 CTAG2O75638 210 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 CFDP00746 253 aaPredicted RBP11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 AKAIN1P0CW23 69 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 PRSS3P35030 304 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 CSNK1A1P48729 337 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 RAB11BQ15907 218 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 C3AR1Q16581 482 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 FAAP20Q6NZ36 180 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 SLC38A6Q8IZM9 456 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 OR6N1Q8NGY5 312 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 ASB13Q8WXK3 278 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 FOXN4Q96NZ1 517 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 OR8B4Q96RC9 309 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 PRRG4Q9BZD6 226 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 NARFLQ9H6Q4 476 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 CA10Q9NS85 328 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 ZNF224Q9NZL3 707 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 IGKV1D-43A0A0B4J1Z2 117 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 A0A1B0GTH9 108 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 HMSDA8MTL9 139 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 PYCARD-AS1I3L0S3 204 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 CYTIPO60759 359 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 SPARCP09486 303 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 GUCA1AP43080 201 aaPredicted RBP11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 UCNP55089 124 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 GMFBP60983 142 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 ABLIM2Q6H8Q1 611 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 SLC18B1Q6NT16 456 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 KCTD18Q6PI47 426 aaPredicted RBP11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 SLC36A1Q7Z2H8 476 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 SLC51BQ86UW2 128 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 PRSS35Q8N3Z0 413 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 OR10H5Q8NGA6 315 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 OR51D1Q8NGF3 324 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 INTS12Q96CB8 462 aaKnown RBP11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 ZNF385AQ96PM9 386 aaKnown RBP11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 ELOVL3Q9HB03 270 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 RDH8Q9NYR8 311 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 SPRR3Q9UBC9 169 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 UPB1Q9UBR1 384 aa11.6□□□□□ -0.55
SQSTM1-201ENST00000360718 GTF3C1Q12789 2109 aa11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 TRAV18A0A075B6X5 111 aa11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 A0A087WV48 116 aa11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 LOC100289279A0A1B0GTE1 492 aa11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 OR6C65A6NJZ3 312 aa11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 C1QTNF9BB2RNN3 333 aa11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 ZNHIT1O43257 154 aa11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 HRGP04196 525 aa11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 RLN1P04808 185 aa11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 C1QTNF9P0C862 333 aa11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 TMIGD3P0DMS9 266 aaPredicted RBP11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 CXCL2P19875 107 aa11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 PRKACBP22694 351 aa11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 TAGLNQ01995 201 aaKnown RBP11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 NHLRC3Q5JS37 347 aa11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 WDR38Q5JTN6 314 aa11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 ZNF679Q8IYX0 411 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms