RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 MUCL1Q96DR8 90 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 EPHX3Q9H6B9 360 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 IL17BQ9UHF5 180 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 GATCO43716 136 aaKnown RBP12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 ACAA1P09110 424 aaPredicted RBP12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 CEBPBP17676 345 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 AMTP48728 403 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 RPL18Q07020 188 aaKnown RBP12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 PLA1AQ53H76 456 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 CISD2Q8N5K1 135 aaKnown RBP12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 OR52N4Q8NGI2 321 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 H1FXQ92522 213 aaKnown RBP12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 ELOVL1Q9BW60 279 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 FCN1O00602 326 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 SLC17A2O00624 439 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 FCMRO60667 390 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 PIAS2O75928 621 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 OR2J3O76001 311 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 GPM6AP51674 278 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 MAML2Q8IZL2 1156 aaPredicted RBP12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 GOT1L1Q8NHS2 421 aaPredicted RBP12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 GSX1Q9H4S2 264 aaPredicted RBP12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 TMEM9BQ9NQ34 198 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 ZNF835Q9Y2P0 537 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 ABCD4O14678 606 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 PKIAP61925 76 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 C12orf73Q69YU5 71 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 STPG2Q8N412 459 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 MSL2Q9HCI7 577 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 FPR2P25090 351 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 RFC3P40938 356 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 GPR12P47775 334 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 PET117Q6UWS5 81 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 GPR137Q96N19 417 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 MS4A7Q9GZW8 240 aaPredicted RBP12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 PBOV1Q9GZY1 135 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 BCL2L10Q9HD36 194 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 SLCO1C1Q9NYB5 712 aa12.15□□□□□ -0.46
CCDC144A-203ENST00000360495 A0A1W2PR48 441 aa12.15□□□□□ -0.47
CCDC144A-203ENST00000360495 SPINK4O60575 86 aa12.15□□□□□ -0.47
CCDC144A-203ENST00000360495 MPC2O95563 127 aa12.15□□□□□ -0.47
CCDC144A-203ENST00000360495 SSR4P51571 173 aa12.15□□□□□ -0.47
CCDC144A-203ENST00000360495 PNLIPRP3Q17RR3 467 aa12.15□□□□□ -0.47
CCDC144A-203ENST00000360495 SEZ6L2Q6UXD5 910 aa12.15□□□□□ -0.47
CCDC144A-203ENST00000360495 PLPP6Q8IY26 295 aa12.15□□□□□ -0.47
CCDC144A-203ENST00000360495 MS4A6EQ96DS6 147 aa12.15□□□□□ -0.47
CCDC144A-203ENST00000360495 NPAS1Q99742 590 aa12.15□□□□□ -0.47
CCDC144A-203ENST00000360495 RTL8AQ9BWD3 113 aa12.15□□□□□ -0.47
CCDC144A-203ENST00000360495 A0A1B0GTQ1 180 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 CNIH1O95406 144 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 ONECUT2O95948 504 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 GYPAP02724 150 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 SBK3P0C264 359 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 PPP1R1AQ13522 171 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 OR5I1Q13606 314 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 LAIR1Q6GTX8 287 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 DHRS7BQ6IAN0 325 aaPredicted RBP12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 TAS1R1Q7RTX1 841 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 EXTL1Q92935 676 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 TRIB1Q96RU8 372 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 NRSN2Q9GZP1 204 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 LINC00862A6NCI5 91 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 NKX6-3A6NJ46 265 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 KLK8O60259 260 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 SULT1A3P0DMM9 295 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 SULT1A4P0DMN0 295 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 HLA-DRB3P79483 266 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 SSX1Q16384 188 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 ABLIM2Q6H8Q1 611 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 C9orf62Q8N4C0 152 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 SCCPDHQ8NBX0 429 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 NDFIP1Q9BT67 221 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 LYRM4Q9HD34 91 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 DUSP13Q9UII6 198 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 ING1Q9UK53 422 aaPredicted RBP12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 MMACHCQ9Y4U1 282 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 MED19A0JLT2 244 aaPredicted RBP12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 OR5K3A6NET4 321 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 FAM166BA8MTA8 275 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 CRYBA1P05813 215 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 SLC6A12P48065 614 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 SELENOPP49908 381 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 SULT1A2P50226 295 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 TMEM97Q5BJF2 176 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 DUSP18Q8NEJ0 188 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 OR52N5Q8NH56 324 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 ARRDC3Q96B67 414 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 NTNG2Q96CW9 530 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 OR1A1Q9P1Q5 309 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 TMEM202A6NGA9 273 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 MASP2O00187 686 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 TMPRSS11DO60235 418 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 C19orf57Q0VDD7 668 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 RAB32Q13637 225 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 ADAMTSL4Q6UY14 1074 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 ARHGEF39Q8N4T4 335 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 SIRT5Q9NXA8 310 aa12.14□□□□□ -0.47
CCDC144A-203ENST00000360495 URB1O60287 2271 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms