RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 EVX1P49640 407 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 TMEM102Q8N9M5 508 aaPredicted RBP8.46□□□□□ -1.05
VPS13A-203ENST00000360280 MDGA1Q8NFP4 955 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 PFN4Q8NHR9 129 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 WDR89Q96FK6 387 aaPredicted RBP8.46□□□□□ -1.05
VPS13A-203ENST00000360280 ADGRG7Q96K78 797 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 GPR87Q9BY21 358 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 SLC5A6Q9Y289 635 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 ARHGEF17Q96PE2 2063 aaPredicted RBP8.46□□□□□ -1.05
VPS13A-203ENST00000360280 GLRA1P23415 457 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 CD200P41217 278 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 CDC34P49427 236 aaPredicted RBP8.46□□□□□ -1.05
VPS13A-203ENST00000360280 YOD1Q5VVQ6 348 aaPredicted RBP8.46□□□□□ -1.05
VPS13A-203ENST00000360280 BPIFA4PQ86YQ2 179 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 TOPAZ1Q8N9V7 1692 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 SNRNP200O75643 2136 aaKnown RBP8.46□□□□□ -1.05
VPS13A-203ENST00000360280 CST4P01036 141 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 SLC35E2P0CK97 266 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 CYB561P49447 251 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 ZNF280AP59817 542 aaPredicted RBP8.46□□□□□ -1.05
VPS13A-203ENST00000360280 A0A1B0GWA3 101 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 AP4M1O00189 453 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 DGAT2L7PQ6IED9 249 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 OR2A2Q6IF42 318 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 PCYT2Q99447 389 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 ATP5SQ99766 215 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 NTNG1Q9Y2I2 539 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 TIMM10BQ9Y5J6 103 aa8.46□□□□□ -1.05
VPS13A-203ENST00000360280 RGRP47804 291 aa8.46□□□□□ -1.06
VPS13A-203ENST00000360280 TMEM81Q6P7N7 255 aa8.46□□□□□ -1.06
VPS13A-203ENST00000360280 MRPS2Q9Y399 296 aaKnown RBP8.46□□□□□ -1.06
VPS13A-203ENST00000360280 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.46□□□□□ -1.06
VPS13A-203ENST00000360280 COX19Q49B96 90 aa8.46□□□□□ -1.06
VPS13A-203ENST00000360280 PIANPQ8IYJ0 282 aa8.46□□□□□ -1.06
VPS13A-203ENST00000360280 ACY3Q96HD9 319 aa8.46□□□□□ -1.06
VPS13A-203ENST00000360280 RCL1Q9Y2P8 373 aaKnown RBP8.46□□□□□ -1.06
VPS13A-203ENST00000360280 IAPPP10997 89 aa8.46□□□□□ -1.06
VPS13A-203ENST00000360280 CMTM4Q8IZR5 234 aa8.46□□□□□ -1.06
VPS13A-203ENST00000360280 CTRCQ99895 268 aa8.46□□□□□ -1.06
VPS13A-203ENST00000360280 RREB1Q92766 1687 aa8.46□□□□□ -1.06
VPS13A-203ENST00000360280 SERPINE3A8MV23 424 aa8.46□□□□□ -1.06
VPS13A-203ENST00000360280 ETV3LQ6ZN32 361 aa8.46□□□□□ -1.06
VPS13A-203ENST00000360280 ZDHHC23Q8IYP9 409 aa8.46□□□□□ -1.06
VPS13A-203ENST00000360280 TMEM191AQ9H0A3 160 aa8.46□□□□□ -1.06
VPS13A-203ENST00000360280 ANKRD61A6NGH8 418 aa8.46□□□□□ -1.06
VPS13A-203ENST00000360280 SMAGPQ0VAQ4 97 aa8.46□□□□□ -1.06
VPS13A-203ENST00000360280 CDKN3Q16667 212 aa8.46□□□□□ -1.06
VPS13A-203ENST00000360280 TMEM56Q96MV1 263 aa8.46□□□□□ -1.06
VPS13A-203ENST00000360280 SLC45A2Q9UMX9 530 aa8.46□□□□□ -1.06
VPS13A-203ENST00000360280 CTSAP10619 480 aa8.46□□□□□ -1.06
VPS13A-203ENST00000360280 PITX1P78337 314 aaPredicted RBP8.46□□□□□ -1.06
VPS13A-203ENST00000360280 SRSF9Q13242 221 aaKnown RBP eCLIP8.46□□□□□ -1.06
VPS13A-203ENST00000360280 DHRS13Q6UX07 377 aa8.46□□□□□ -1.06
VPS13A-203ENST00000360280 TTC9Q92623 222 aa8.46□□□□□ -1.06
VPS13A-203ENST00000360280 TEAD3Q99594 435 aa8.46□□□□□ -1.06
VPS13A-203ENST00000360280 MMACHCQ9Y4U1 282 aa8.46□□□□□ -1.06
VPS13A-203ENST00000360280 SLURP2P0DP57 97 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 OR1L1Q8NH94 360 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 GPR137Q96N19 417 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 POM121BA6NF01 834 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 ZNF26P17031 533 aaPredicted RBP8.45□□□□□ -1.06
VPS13A-203ENST00000360280 PSMB5P28074 263 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 ARRB2P32121 409 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 CALHM3Q86XJ0 350 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 DOLPP1Q86YN1 238 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 OR6S1Q8NH40 331 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 MOB3AQ96BX8 217 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 ZIC5Q96T25 663 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 A0A1W2PN81 502 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 M0QZQ0 153 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 CHRNA7P36544 502 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 OPRK1P41145 380 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 DND1Q8IYX4 353 aaKnown RBP8.45□□□□□ -1.06
VPS13A-203ENST00000360280 ISL2Q96A47 359 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 P2RY12Q9H244 342 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 WASHC3Q9Y3C0 194 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 TMEM218A2RU14 115 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 SIRPB1O00241 398 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 GNB2P62879 340 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 SLC35E4Q6ICL7 350 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 MYPOPQ86VE0 399 aaPredicted RBP8.45□□□□□ -1.06
VPS13A-203ENST00000360280 FAM26EQ8N5C1 309 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 ST3GAL6Q9Y274 331 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 ZNF716A6NP11 495 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 CD3DP04234 171 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 PKIAP61925 76 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 PTDSS2Q9BVG9 487 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 USP22Q9UPT9 525 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 C5orf49A4QMS7 147 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 REC114Q7Z4M0 266 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 OR4D10Q8NGI6 311 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 TMEM147Q9BVK8 224 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 WSB1Q9Y6I7 421 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 NUMBLQ9Y6R0 609 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 DOCK5Q9H7D0 1870 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 SSX1Q16384 188 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 C11orf87Q6NUJ2 197 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 HTR3DQ70Z44 454 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 ARFGAP1Q8N6T3 406 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms