RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 MBNL2Q5VZF2 373 aaKnown RBP10.66□□□□□ -0.7
NIF3L1-201ENST00000359683 RGS7BPQ6MZT1 257 aaPredicted RBP10.66□□□□□ -0.7
NIF3L1-201ENST00000359683 Q6ZSR3 168 aa10.66□□□□□ -0.7
NIF3L1-201ENST00000359683 ZNF295-AS1Q8N0V1 137 aa10.66□□□□□ -0.7
NIF3L1-201ENST00000359683 ZFP41Q8N8Y5 198 aa10.66□□□□□ -0.7
NIF3L1-201ENST00000359683 OR2AE1Q8NHA4 323 aa10.66□□□□□ -0.7
NIF3L1-201ENST00000359683 KLF14Q8TD94 323 aaPredicted RBP10.66□□□□□ -0.7
NIF3L1-201ENST00000359683 HAVCR1Q96D42 359 aa10.66□□□□□ -0.7
NIF3L1-201ENST00000359683 SMIM19Q96E16 107 aa10.66□□□□□ -0.7
NIF3L1-201ENST00000359683 LYZL4Q96KX0 146 aa10.66□□□□□ -0.7
NIF3L1-201ENST00000359683 OPALINQ96PE5 141 aa10.66□□□□□ -0.7
NIF3L1-201ENST00000359683 CISD1Q9NZ45 108 aaKnown RBP10.66□□□□□ -0.7
NIF3L1-201ENST00000359683 PTTG3PQ9NZH4 202 aa10.66□□□□□ -0.7
NIF3L1-201ENST00000359683 GTF2A1LQ9UNN4 478 aa10.66□□□□□ -0.7
NIF3L1-201ENST00000359683 TMEM212A6NML5 194 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 VSTM5A8MXK1 200 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 INMTO95050 263 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 HSMCR30P0CW71 290 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 RAC2P15153 192 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 CPEP16870 476 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 CELP19835 753 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 CCL1P22362 96 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 CFL1P23528 166 aaKnown RBP10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 FAM3AP98173 230 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 HLXQ14774 488 aaPredicted RBP10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 TIGD6Q17RP2 521 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 ARMCX4Q5H9R4 360 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 SPATA46Q5T0L3 261 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 TMEM244Q5VVB8 128 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 VHLLQ6RSH7 139 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 RDH10Q8IZV5 341 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 PLPP7Q8NBV4 271 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 OR5AK2Q8NH90 309 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 OR51E1Q8TCB6 317 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 AKAP1Q92667 903 aaKnown RBP eCLIP10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 ITFG2Q969R8 447 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 MUL1Q969V5 352 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 CMBLQ96DG6 245 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 C14orf79Q96F83 325 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 REEP6Q96HR9 211 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 PGLYRP3Q96LB9 341 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 DHRS9Q9BPW9 319 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 PDCD1LG2Q9BQ51 273 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 MRPS26Q9BYN8 205 aaKnown RBP10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 GPR84Q9NQS5 396 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 CMAHPQ9Y471 501 aa10.65□□□□□ -0.7
NIF3L1-201ENST00000359683 LOC390937A0A1W2PQ73 354 aa10.64□□□□□ -0.71
NIF3L1-201ENST00000359683 P2RY10O00398 339 aa10.64□□□□□ -0.71
NIF3L1-201ENST00000359683 UBCP0CG48 685 aaKnown RBP10.64□□□□□ -0.71
NIF3L1-201ENST00000359683 APOBEC3AP31941 199 aaPredicted RBP10.64□□□□□ -0.71
NIF3L1-201ENST00000359683 FABP6P51161 128 aa10.64□□□□□ -0.71
NIF3L1-201ENST00000359683 SLC3A1Q07837 685 aa10.64□□□□□ -0.71
NIF3L1-201ENST00000359683 PSG7Q13046 419 aa10.64□□□□□ -0.71
NIF3L1-201ENST00000359683 NEDD8Q15843 81 aa10.64□□□□□ -0.71
NIF3L1-201ENST00000359683 ADIPOQQ15848 244 aa10.64□□□□□ -0.71
NIF3L1-201ENST00000359683 PGAP1Q75T13 922 aa10.64□□□□□ -0.71
NIF3L1-201ENST00000359683 ZNF676Q8N7Q3 588 aa10.64□□□□□ -0.71
NIF3L1-201ENST00000359683 SYNPRQ8TBG9 265 aa10.64□□□□□ -0.71
NIF3L1-201ENST00000359683 GHSRQ92847 366 aa10.64□□□□□ -0.71
NIF3L1-201ENST00000359683 MRPL24Q96A35 216 aaKnown RBP10.64□□□□□ -0.71
NIF3L1-201ENST00000359683 SOX7Q9BT81 388 aa10.64□□□□□ -0.71
NIF3L1-201ENST00000359683 OPA3Q9H6K4 179 aa10.64□□□□□ -0.71
NIF3L1-201ENST00000359683 VCX3AQ9NNX9 186 aa10.64□□□□□ -0.71
NIF3L1-201ENST00000359683 IGLV3-9A0A075B6K5 115 aa10.63□□□□□ -0.71
NIF3L1-201ENST00000359683 hCG_38984A0A1B0GV85 526 aa10.63□□□□□ -0.71
NIF3L1-201ENST00000359683 HS3ST1O14792 307 aa10.63□□□□□ -0.71
NIF3L1-201ENST00000359683 CLPTM1O96005 669 aa10.63□□□□□ -0.71
NIF3L1-201ENST00000359683 IGHV3-13P01766 116 aa10.63□□□□□ -0.71
NIF3L1-201ENST00000359683 CD53P19397 219 aa10.63□□□□□ -0.71
NIF3L1-201ENST00000359683 KITLGP21583 273 aa10.63□□□□□ -0.71
NIF3L1-201ENST00000359683 ACHEP22303 614 aa10.63□□□□□ -0.71
NIF3L1-201ENST00000359683 GCH1P30793 250 aa10.63□□□□□ -0.71
NIF3L1-201ENST00000359683 MPV17P39210 176 aa10.63□□□□□ -0.71
NIF3L1-201ENST00000359683 GP2P55259 537 aaKnown RBP10.63□□□□□ -0.71
NIF3L1-201ENST00000359683 TLE4Q04727 773 aa10.63□□□□□ -0.71
NIF3L1-201ENST00000359683 TNK1Q13470 666 aa10.63□□□□□ -0.71
NIF3L1-201ENST00000359683 ODF4Q2M2E3 257 aa10.63□□□□□ -0.71
NIF3L1-201ENST00000359683 TMEM255AQ5JRV8 349 aa10.63□□□□□ -0.71
NIF3L1-201ENST00000359683 DOK3Q7L591 496 aa10.63□□□□□ -0.71
NIF3L1-201ENST00000359683 MRPL21Q7Z2W9 205 aaKnown RBP10.63□□□□□ -0.71
NIF3L1-201ENST00000359683 LRP11Q86VZ4 500 aa10.63□□□□□ -0.71
NIF3L1-201ENST00000359683 PHC2Q8IXK0 858 aa10.63□□□□□ -0.71
NIF3L1-201ENST00000359683 CCDC54Q8NEL0 328 aa10.63□□□□□ -0.71
NIF3L1-201ENST00000359683 UFD1Q92890 307 aa10.63□□□□□ -0.71
NIF3L1-201ENST00000359683 COMMD4Q9H0A8 199 aa10.63□□□□□ -0.71
NIF3L1-201ENST00000359683 ZNF281Q9Y2X9 895 aa10.63□□□□□ -0.71
NIF3L1-201ENST00000359683 SF3B6Q9Y3B4 125 aaKnown RBP10.63□□□□□ -0.71
NIF3L1-201ENST00000359683 LRBAP50851 2863 aa10.63□□□□□ -0.71
NIF3L1-201ENST00000359683 PNMA8CA0A1B0GUJ8 204 aa10.62□□□□□ -0.71
NIF3L1-201ENST00000359683 A0A1B0GVI7 797 aa10.62□□□□□ -0.71
NIF3L1-201ENST00000359683 LOC107986453A0A1B0GWG9 222 aa10.62□□□□□ -0.71
NIF3L1-201ENST00000359683 SYT7O43581 403 aa10.62□□□□□ -0.71
NIF3L1-201ENST00000359683 TFAP2AP05549 437 aa10.62□□□□□ -0.71
NIF3L1-201ENST00000359683 OR4A8P0C604 315 aa10.62□□□□□ -0.71
NIF3L1-201ENST00000359683 PSMB9P28065 219 aa10.62□□□□□ -0.71
NIF3L1-201ENST00000359683 SERPINF1P36955 418 aa10.62□□□□□ -0.71
NIF3L1-201ENST00000359683 DDOSTP39656 456 aa10.62□□□□□ -0.71
NIF3L1-201ENST00000359683 EVX1P49640 407 aa10.62□□□□□ -0.71
NIF3L1-201ENST00000359683 GSK3AP49840 483 aa10.62□□□□□ -0.71
NIF3L1-201ENST00000359683 RPS11P62280 158 aaKnown RBP eCLIP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms