RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 ARFGEF1Q9Y6D6 1849 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 RFPL4AA6NLU0 287 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 RFPL4AL1F8VTS6 287 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 ANGPTL7O43827 346 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 GLB1P16278 677 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 EDDM3BP56851 147 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 TMEM128Q5BJH2 165 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 LANCL3Q6ZV70 420 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 OR4D9Q8NGE8 314 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 MSI2Q96DH6 328 aaKnown RBP12.35□□□□□ -0.43
VCP-201ENST00000358901 CMTM3Q96MX0 182 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 TUBAL3A6NHL2 446 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 BCL2L11O43521 198 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 ZNF117Q03924 483 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 SIGIRRQ6IA17 410 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 SLC25A26Q70HW3 274 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 UBE3DQ7Z6J8 389 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 PTP4A1Q93096 173 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 ZNF707Q96C28 371 aaPredicted RBP12.35□□□□□ -0.43
VCP-201ENST00000358901 CMBLQ96DG6 245 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 MOGAT1Q96PD6 335 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 AK3Q9UIJ7 227 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 A0A096LPE4 126 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 A0A1W2PPZ6 126 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 ADRA2CP18825 462 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 PIGPP57054 158 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 PPP1CAP62136 330 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 C11orf87Q6NUJ2 197 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 LCN15Q6UWW0 184 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 NHLRC1Q6VVB1 395 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 ETFBKMTQ8IXQ9 262 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 MAGT1Q9H0U3 335 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 FAM60AQ9NP50 221 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 SLC52A3Q9NQ40 469 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 GAB2Q9UQC2 676 aa12.35□□□□□ -0.43
VCP-201ENST00000358901 MT-ND4LP03901 98 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 RPS2P15880 293 aaKnown RBP12.34□□□□□ -0.43
VCP-201ENST00000358901 DHRS2Q13268 280 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 IRF3Q14653 427 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 TMEM123Q8N131 208 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 GPA33Q99795 319 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 FN3KRPQ9HA64 309 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 NUDT19A8MXV4 375 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 E5RGE8 158 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 C17orf112F2Z3M2 114 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 ZIC1Q15915 447 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 ZNF79Q15937 498 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 ARSJQ5FYB0 599 aaPredicted RBP12.34□□□□□ -0.43
VCP-201ENST00000358901 DMKNQ6E0U4 476 aaPredicted RBP12.34□□□□□ -0.43
VCP-201ENST00000358901 TMEM71Q6P5X7 295 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 ANKRD16Q6P6B7 361 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 OR1N1Q8NGS0 311 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 C10orf90Q96M02 699 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 PLEKHA2Q9HB19 425 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 NSG2Q9Y328 171 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 LILRA5A6NI73 299 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 SCGB1D1O95968 90 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 CXCL3P19876 107 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 TOMM34Q15785 309 aaPredicted RBP12.34□□□□□ -0.43
VCP-201ENST00000358901 ARRDC1Q8N5I2 433 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 DTWD2Q8NBA8 298 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 OR4A16Q8NH70 328 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 PHF7Q9BWX1 381 aaPredicted RBP12.34□□□□□ -0.43
VCP-201ENST00000358901 ST3GAL6Q9Y274 331 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 OR2C1O95371 312 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 CLN3Q13286 438 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 HLXQ14774 488 aaPredicted RBP12.34□□□□□ -0.43
VCP-201ENST00000358901 CDONQ4KMG0 1287 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 ARHGEF39Q8N4T4 335 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 TTC9Q92623 222 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 THOC3Q96J01 351 aaKnown RBP12.34□□□□□ -0.43
VCP-201ENST00000358901 C1QTNF6Q9BXI9 259 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 PLA2G2FQ9BZM2 168 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 GNG13Q9P2W3 67 aa12.34□□□□□ -0.43
VCP-201ENST00000358901 SPTBN2O15020 2390 aa12.33□□□□□ -0.43
VCP-201ENST00000358901 TXNDC12O95881 172 aa12.33□□□□□ -0.44
VCP-201ENST00000358901 B4GALT1P15291 398 aa12.33□□□□□ -0.44
VCP-201ENST00000358901 PSMB3P49720 205 aa12.33□□□□□ -0.44
VCP-201ENST00000358901 TMEM41BQ5BJD5 291 aa12.33□□□□□ -0.44
VCP-201ENST00000358901 PDZD11Q5EBL8 140 aa12.33□□□□□ -0.44
VCP-201ENST00000358901 SPANXN5Q5MJ07 72 aa12.33□□□□□ -0.44
VCP-201ENST00000358901 HPSE2Q8WWQ2 592 aa12.33□□□□□ -0.44
VCP-201ENST00000358901 IGHV5-51A0A0C4DH38 117 aa12.33□□□□□ -0.44
VCP-201ENST00000358901 SSSCA1O60232 199 aa12.33□□□□□ -0.44
VCP-201ENST00000358901 CTAG2O75638 210 aa12.33□□□□□ -0.44
VCP-201ENST00000358901 SCAF4O95104 1147 aaKnown RBP12.33□□□□□ -0.44
VCP-201ENST00000358901 CTXN2P0C2S0 81 aa12.33□□□□□ -0.44
VCP-201ENST00000358901 ZFP36L2P47974 494 aaKnown RBP12.33□□□□□ -0.44
VCP-201ENST00000358901 ZNF85Q03923 595 aa12.33□□□□□ -0.44
VCP-201ENST00000358901 DUSP2Q05923 314 aa12.33□□□□□ -0.44
VCP-201ENST00000358901 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.33□□□□□ -0.44
VCP-201ENST00000358901 ALKBH3Q96Q83 286 aaPredicted RBP12.33□□□□□ -0.44
VCP-201ENST00000358901 ZDBF2Q9HCK1 2354 aa12.33□□□□□ -0.44
VCP-201ENST00000358901 KLRC4-KLRK1H3BQV0 150 aa12.33□□□□□ -0.44
VCP-201ENST00000358901 H7C1Q1 480 aa12.33□□□□□ -0.44
VCP-201ENST00000358901 PTAFRP25105 342 aa12.33□□□□□ -0.44
VCP-201ENST00000358901 FXNQ16595 210 aa12.33□□□□□ -0.44
VCP-201ENST00000358901 MRM1Q6IN84 353 aaKnown RBP12.33□□□□□ -0.44
VCP-201ENST00000358901 RPUSD3Q6P087 351 aaKnown RBP12.33□□□□□ -0.44
VCP-201ENST00000358901 PRSS42Q7Z5A4 293 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms