RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 DCTN5Q9BTE1 182 aa12.93□□□□□ -0.34
IFT20-202ENST00000357896 METTL8Q9H825 291 aaKnown RBP12.93□□□□□ -0.34
IFT20-202ENST00000357896 PRPF19Q9UMS4 504 aaKnown RBP12.93□□□□□ -0.34
IFT20-202ENST00000357896 SF3B6Q9Y3B4 125 aaKnown RBP12.93□□□□□ -0.34
IFT20-202ENST00000357896 GGT3PA6NGU5 568 aa12.92□□□□□ -0.34
IFT20-202ENST00000357896 IGLL1P15814 213 aa12.92□□□□□ -0.34
IFT20-202ENST00000357896 FAHP16930 419 aa12.92□□□□□ -0.34
IFT20-202ENST00000357896 ZNF26P17031 533 aaPredicted RBP12.92□□□□□ -0.34
IFT20-202ENST00000357896 CRABP1P29762 137 aa12.92□□□□□ -0.34
IFT20-202ENST00000357896 GGT2P36268 569 aa12.92□□□□□ -0.34
IFT20-202ENST00000357896 TPTEP56180 551 aa12.92□□□□□ -0.34
IFT20-202ENST00000357896 BLMHQ13867 455 aa12.92□□□□□ -0.34
IFT20-202ENST00000357896 WDR38Q5JTN6 314 aa12.92□□□□□ -0.34
IFT20-202ENST00000357896 CRIP3Q6Q6R5 217 aa12.92□□□□□ -0.34
IFT20-202ENST00000357896 CCBE1Q6UXH8 406 aaPredicted RBP12.92□□□□□ -0.34
IFT20-202ENST00000357896 ZNF730Q6ZMV8 503 aa12.92□□□□□ -0.34
IFT20-202ENST00000357896 TSEN54Q7Z6J9 526 aaKnown RBP12.92□□□□□ -0.34
IFT20-202ENST00000357896 FGFRL1Q8N441 504 aa12.92□□□□□ -0.34
IFT20-202ENST00000357896 PNKDQ8N490 385 aa12.92□□□□□ -0.34
IFT20-202ENST00000357896 C8orf46Q8TAG6 207 aa12.92□□□□□ -0.34
IFT20-202ENST00000357896 TSPEARQ8WU66 669 aa12.92□□□□□ -0.34
IFT20-202ENST00000357896 ZBTB9Q96C00 473 aa12.92□□□□□ -0.34
IFT20-202ENST00000357896 C12orf43Q96C57 262 aaKnown RBP12.92□□□□□ -0.34
IFT20-202ENST00000357896 FNDC11Q9BVV2 318 aa12.92□□□□□ -0.34
IFT20-202ENST00000357896 MEGF9Q9H1U4 602 aa12.92□□□□□ -0.34
IFT20-202ENST00000357896 RNPEPL1Q9HAU8 725 aa12.92□□□□□ -0.34
IFT20-202ENST00000357896 LOC100653049A0A140TA62 436 aa12.91□□□□□ -0.34
IFT20-202ENST00000357896 M0R1W7 72 aa12.91□□□□□ -0.34
IFT20-202ENST00000357896 BHLHE40O14503 412 aa12.91□□□□□ -0.34
IFT20-202ENST00000357896 CDC42EP2O14613 210 aa12.91□□□□□ -0.34
IFT20-202ENST00000357896 KRT34O76011 436 aa12.91□□□□□ -0.34
IFT20-202ENST00000357896 PPP1R3DO95685 299 aa12.91□□□□□ -0.34
IFT20-202ENST00000357896 MDH1P40925 334 aaKnown RBP12.91□□□□□ -0.34
IFT20-202ENST00000357896 DLX1P56177 255 aa12.91□□□□□ -0.34
IFT20-202ENST00000357896 TRAP1Q12931 704 aaKnown RBP12.91□□□□□ -0.34
IFT20-202ENST00000357896 CYLC2Q14093 348 aaPredicted RBP12.91□□□□□ -0.34
IFT20-202ENST00000357896 MEP1BQ16820 701 aa12.91□□□□□ -0.34
IFT20-202ENST00000357896 CYBRD1Q53TN4 286 aa12.91□□□□□ -0.34
IFT20-202ENST00000357896 ZBTB37Q5TC79 503 aa12.91□□□□□ -0.34
IFT20-202ENST00000357896 ERICH5Q6P6B1 374 aa12.91□□□□□ -0.34
IFT20-202ENST00000357896 MBOAT2Q6ZWT7 520 aa12.91□□□□□ -0.34
IFT20-202ENST00000357896 RRM2BQ7LG56 351 aa12.91□□□□□ -0.34
IFT20-202ENST00000357896 NAA40Q86UY6 237 aa12.91□□□□□ -0.34
IFT20-202ENST00000357896 OFCC1Q8IZS5 231 aa12.91□□□□□ -0.34
IFT20-202ENST00000357896 PAPD5Q8NDF8 572 aaKnown RBP12.91□□□□□ -0.34
IFT20-202ENST00000357896 TPD52L3Q96J77 140 aa12.91□□□□□ -0.34
IFT20-202ENST00000357896 CITED2Q99967 270 aaPredicted RBP12.91□□□□□ -0.34
IFT20-202ENST00000357896 NRIP3Q9NQ35 241 aa12.91□□□□□ -0.34
IFT20-202ENST00000357896 PEX14O75381 377 aa12.9□□□□□ -0.34
IFT20-202ENST00000357896 NDUFB2O95178 105 aa12.9□□□□□ -0.34
IFT20-202ENST00000357896 GPR4P46093 362 aa12.9□□□□□ -0.34
IFT20-202ENST00000357896 ZNF92Q03936 586 aa12.9□□□□□ -0.34
IFT20-202ENST00000357896 IKZF1Q13422 519 aa12.9□□□□□ -0.34
IFT20-202ENST00000357896 PCK2Q16822 640 aa12.9□□□□□ -0.34
IFT20-202ENST00000357896 NANOGP8Q6NSW7 305 aa12.9□□□□□ -0.34
IFT20-202ENST00000357896 SLC18B1Q6NT16 456 aa12.9□□□□□ -0.34
IFT20-202ENST00000357896 CFAP77Q6ZQR2 320 aa12.9□□□□□ -0.34
IFT20-202ENST00000357896 FAM216BQ8N7L0 139 aa12.9□□□□□ -0.34
IFT20-202ENST00000357896 OR2AJ1Q8NGZ0 328 aa12.9□□□□□ -0.34
IFT20-202ENST00000357896 LRRC29Q8WV35 223 aa12.9□□□□□ -0.34
IFT20-202ENST00000357896 H1FXQ92522 213 aaKnown RBP12.9□□□□□ -0.34
IFT20-202ENST00000357896 RORBQ92753 470 aa12.9□□□□□ -0.34
IFT20-202ENST00000357896 SPTSSAQ969W0 71 aa12.9□□□□□ -0.34
IFT20-202ENST00000357896 RHCGQ9UBD6 479 aa12.9□□□□□ -0.34
IFT20-202ENST00000357896 A0A087WUU8 490 aa12.89□□□□□ -0.35
IFT20-202ENST00000357896 A0A1B0GW55 424 aa12.89□□□□□ -0.35
IFT20-202ENST00000357896 ADARB2-AS1A8MUL3 147 aa12.89□□□□□ -0.35
IFT20-202ENST00000357896 SOCS2O14508 198 aa12.89□□□□□ -0.35
IFT20-202ENST00000357896 IMPA2O14732 288 aa12.89□□□□□ -0.35
IFT20-202ENST00000357896 ACOT8O14734 319 aa12.89□□□□□ -0.35
IFT20-202ENST00000357896 DUX4L2P0CJ85 424 aa12.89□□□□□ -0.35
IFT20-202ENST00000357896 DUX4L3P0CJ86 424 aa12.89□□□□□ -0.35
IFT20-202ENST00000357896 DUX4L4P0CJ87 422 aa12.89□□□□□ -0.35
IFT20-202ENST00000357896 DUX4L5P0CJ88 424 aa12.89□□□□□ -0.35
IFT20-202ENST00000357896 DUX4L6P0CJ89 424 aa12.89□□□□□ -0.35
IFT20-202ENST00000357896 DUX4L7P0CJ90 424 aa12.89□□□□□ -0.35
IFT20-202ENST00000357896 PAICSP22234 425 aaKnown RBP12.89□□□□□ -0.35
IFT20-202ENST00000357896 NAA10P41227 235 aaPredicted RBP12.89□□□□□ -0.35
IFT20-202ENST00000357896 TGM4P49221 684 aa12.89□□□□□ -0.35
IFT20-202ENST00000357896 GSK3BP49841 420 aa12.89□□□□□ -0.35
IFT20-202ENST00000357896 SELENOWP63302 87 aa12.89□□□□□ -0.35
IFT20-202ENST00000357896 SLC36A3Q495N2 470 aa12.89□□□□□ -0.35
IFT20-202ENST00000357896 ATPAF1Q5TC12 328 aaPredicted RBP12.89□□□□□ -0.35
IFT20-202ENST00000357896 DUX4L9Q6RFH8 374 aaPredicted RBP12.89□□□□□ -0.35
IFT20-202ENST00000357896 OR5D13Q8NGL4 314 aa12.89□□□□□ -0.35
IFT20-202ENST00000357896 OR8S1Q8NH09 359 aa12.89□□□□□ -0.35
IFT20-202ENST00000357896 GPX7Q96SL4 187 aaPredicted RBP12.89□□□□□ -0.35
IFT20-202ENST00000357896 NKX3-1Q99801 234 aaPredicted RBP12.89□□□□□ -0.35
IFT20-202ENST00000357896 B9D2Q9BPU9 175 aa12.89□□□□□ -0.35
IFT20-202ENST00000357896 DNTTIP1Q9H147 329 aa12.89□□□□□ -0.35
IFT20-202ENST00000357896 SERTAD4Q9NUC0 356 aa12.89□□□□□ -0.35
IFT20-202ENST00000357896 DUX4Q9UBX2 424 aa12.89□□□□□ -0.35
IFT20-202ENST00000357896 TMEM5Q9Y2B1 443 aa12.89□□□□□ -0.35
IFT20-202ENST00000357896 M0R135 149 aa12.88□□□□□ -0.35
IFT20-202ENST00000357896 DUS4LO95620 317 aaKnown RBP12.88□□□□□ -0.35
IFT20-202ENST00000357896 IFNW1P05000 195 aa12.88□□□□□ -0.35
IFT20-202ENST00000357896 KDELR2P33947 212 aa12.88□□□□□ -0.35
IFT20-202ENST00000357896 CDKN2AP42771 156 aaKnown RBP12.88□□□□□ -0.35
IFT20-202ENST00000357896 YAP1P46937 504 aaKnown RBP12.88□□□□□ -0.35
IFT20-202ENST00000357896 MAGOHP61326 146 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms