RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 OR2V1Q8NHB1 315 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 TRBV23-1A0A0A0MS06 115 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 PRKACBP22694 351 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 AVPR2P30518 371 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 HFEQ30201 348 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 SYT14P1Q58G82 188 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 DPY19L2P2Q6ZN68 376 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 NCCRP1Q6ZVX7 275 aaPredicted RBP6.61□□□□□ -1.35
VPS13A-202ENST00000357409 LOC107986453A0A1B0GWG9 222 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 CST5P28325 142 aaPredicted RBP6.6□□□□□ -1.35
VPS13A-202ENST00000357409 MPGP29372 298 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 MRPL19P49406 292 aaKnown RBP6.6□□□□□ -1.35
VPS13A-202ENST00000357409 OR4F5Q8NH21 305 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 ZNF420Q8TAQ5 688 aaPredicted RBP6.6□□□□□ -1.35
VPS13A-202ENST00000357409 DYRK2Q92630 601 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 OR4F4Q96R69 305 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 F6UZH7 168 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 GATCO43716 136 aaKnown RBP6.6□□□□□ -1.35
VPS13A-202ENST00000357409 ACTL6AO96019 429 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 NGFP01138 241 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 LIPAP38571 399 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 TOR2AQ5JU69 321 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 C6orf201Q7Z4U5 140 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 GVQW1Q8N7I0 195 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 PRRT1Q99946 306 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 COMMD5Q9GZQ3 224 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 YKT6O15498 198 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 GALR2O43603 387 aaPredicted RBP6.6□□□□□ -1.35
VPS13A-202ENST00000357409 CYTIPO60759 359 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 GLAP06280 429 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 CD80P33681 288 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 WNT5AP41221 380 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 Q1RN00 199 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 OR2A14Q96R47 310 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 OPN3Q9H1Y3 402 aaPredicted RBP6.6□□□□□ -1.35
VPS13A-202ENST00000357409 RAB9BQ9NP90 201 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 CITO14578 2027 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 DSCR3O14972 297 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 DHHO43323 396 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 ANKRD34CP0C6C1 535 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 CLDN10P78369 228 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 H3F3AP84243 136 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 OR10P1Q8NGE3 313 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 SLC7A13Q8TCU3 470 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 B4GALNT1Q00973 533 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 OR2T6Q8NHC8 308 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 STACQ99469 402 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 PPIL1Q9Y3C6 166 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 GOLT1BQ9Y3E0 138 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 NEURL4Q96JN8 1562 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 TCRBP04435 133 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 EPHA2P29317 976 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 NXNL2Q5VZ03 156 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 ZDHHC23Q8IYP9 409 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 SPEM1Q8N4L4 309 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 CTDSP1Q9GZU7 261 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 ACSS1Q9NUB1 689 aaPredicted RBP6.6□□□□□ -1.35
VPS13A-202ENST00000357409 SPTY2D1-AS1A0A0U1RR47 76 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 CTSVO60911 334 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 MGPP08493 103 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 APOBEC1P41238 236 aaKnown RBP6.6□□□□□ -1.35
VPS13A-202ENST00000357409 Q71RC1 249 aaPredicted RBP6.6□□□□□ -1.35
VPS13A-202ENST00000357409 ANKRD37Q7Z713 158 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 SLC26A1Q9H2B4 701 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 RABAC1Q9UI14 185 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 GDF2Q9UK05 429 aaPredicted RBP6.6□□□□□ -1.35
VPS13A-202ENST00000357409 COX7A2P2O60397 106 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 CSN3P07498 182 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 CPT2P23786 658 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 IL3RAP26951 378 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 HRH1P35367 487 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 LY6DQ14210 128 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 PEA15Q15121 130 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 ZNF788Q6ZQV5 615 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 OVCH2Q7RTZ1 564 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 OR56B1Q8NGI3 324 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 WFDC12Q8WWY7 111 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 CRYGNQ8WXF5 182 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 PERPQ96FX8 193 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 CXorf58Q96LI9 332 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 CMTM3Q96MX0 182 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 VN1R1Q9GZP7 353 aa6.6□□□□□ -1.35
VPS13A-202ENST00000357409 ELK1P19419 428 aa6.59□□□□□ -1.35
VPS13A-202ENST00000357409 PIGPP57054 158 aa6.59□□□□□ -1.35
VPS13A-202ENST00000357409 SHBQ15464 509 aa6.59□□□□□ -1.35
VPS13A-202ENST00000357409 LEAP2Q969E1 77 aa6.59□□□□□ -1.35
VPS13A-202ENST00000357409 UCN2Q96RP3 112 aa6.59□□□□□ -1.35
VPS13A-202ENST00000357409 COA4Q9NYJ1 87 aa6.59□□□□□ -1.35
VPS13A-202ENST00000357409 USP32Q8NFA0 1604 aa6.59□□□□□ -1.35
VPS13A-202ENST00000357409 CD3DP04234 171 aa6.59□□□□□ -1.35
VPS13A-202ENST00000357409 IL5P05113 134 aa6.59□□□□□ -1.35
VPS13A-202ENST00000357409 RPL7P18124 248 aaKnown RBP6.59□□□□□ -1.35
VPS13A-202ENST00000357409 OR2B8PP59922 312 aa6.59□□□□□ -1.35
VPS13A-202ENST00000357409 MS4A7Q9GZW8 240 aaPredicted RBP6.59□□□□□ -1.35
VPS13A-202ENST00000357409 NRIP3Q9NQ35 241 aa6.59□□□□□ -1.35
VPS13A-202ENST00000357409 A0A1W2PNV4 684 aa6.59□□□□□ -1.35
VPS13A-202ENST00000357409 ARIH2OSQ8N7S6 290 aa6.59□□□□□ -1.35
VPS13A-202ENST00000357409 TECRQ9NZ01 308 aaKnown RBP6.59□□□□□ -1.35
VPS13A-202ENST00000357409 KIF20BQ96Q89 1820 aa6.59□□□□□ -1.35
VPS13A-202ENST00000357409 SLC16A6O15403 523 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms