RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 LMF2Q9BU23 707 aaKnown RBP7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 IL23AQ9NPF7 189 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 TMEM100Q9NV29 134 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 KLK13Q9UKR3 277 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 VSIG4Q9Y279 399 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 TDRD6O60522 2096 aaKnown RBP7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 RNF222A6NCQ9 220 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 ZNF726A6NNF4 738 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 SEC14L6B5MCN3 397 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 SOX1O00570 391 aaPredicted RBP7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 ZNF264O43296 627 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 ZNF208O43345 1280 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 KLF8O95600 359 aaPredicted RBP7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 FREM3P0C091 2139 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 COL9A1P20849 921 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 GSK3AP49840 483 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 SLC25A1P53007 311 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 EGR3Q06889 387 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 SLC17A1Q14916 467 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 ACKR1Q16570 336 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 EXOSC6Q5RKV6 272 aaKnown RBP7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 SLC18B1Q6NT16 456 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 Q6ZSR6 202 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 TRAPPC6BQ86SZ2 158 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 ATG4DQ86TL0 474 aaPredicted RBP7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 COMMD2Q86X83 199 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 POC1BQ8TC44 478 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 SELENOIQ9C0D9 397 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 FN3KRPQ9HA64 309 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 UBQLN4Q9NRR5 601 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 TICRRQ7Z2Z1 1910 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 WDR87Q6ZQQ6 2873 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 MKRN2OSH3BPM6 223 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 STK17BO94768 372 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 WISP1O95388 367 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 CD8AP01732 235 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 ERCC1P07992 297 aaPredicted RBP7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 CTSEP14091 401 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 DAOP14920 347 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 CTLA4P16410 223 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 NTSR1P30989 418 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 CD80P33681 288 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 HRH1P35367 487 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 HHEXQ03014 270 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 ELOCQ15369 112 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 AWAT1Q58HT5 328 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 ZNF385CQ66K41 422 aaPredicted RBP7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 PARM1Q6UWI2 310 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 RTL10Q7L3V2 364 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 FJX1Q86VR8 437 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 C1QL4Q86Z23 238 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 BAP18Q8IXM2 172 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 ZNF679Q8IYX0 411 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 OR5AP2Q8NGF4 316 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 OR13C8Q8NGS7 320 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 ASB5Q8WWX0 329 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 FGF14Q92915 247 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 AKR1E2Q96JD6 320 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 PHB2Q99623 299 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 NDUFAF3Q9BU61 184 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 NXF5Q9H1B4 397 aaKnown RBP7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 MYOZ1Q9NP98 299 aaPredicted RBP7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 SOHLH2Q9NX45 425 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 DOK5Q9P104 306 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 CACFD1Q9UGQ2 172 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 TIMM10BQ9Y5J6 103 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 KPTNQ9Y664 436 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 KIF26BQ2KJY2 2108 aa7.37□□□□□ -1.23
CDC42SE1-201ENST00000357235 MFNGO00587 321 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 UTS2O95399 124 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 CD74P04233 296 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 ASAH2BP0C7U1 165 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 SLC25A4P12235 298 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 GNB3P16520 340 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 NME2P22392 152 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 RPS10P46783 165 aaKnown RBP7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 SLC26A5P58743 744 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 GABREP78334 506 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 ZP2Q05996 745 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 GPM6BQ13491 265 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 ASPHD2Q6ICH7 369 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 ADAD2Q8NCV1 583 aaKnown RBP7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 RPS4Y2Q8TD47 263 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 ROBO4Q8WZ75 1007 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 R3HDM4Q96D70 268 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 IP6K3Q96PC2 410 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 OR8B4Q96RC9 309 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 OR11A1Q9GZK7 315 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 SEMA6CQ9H3T2 930 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 DNAJB11Q9UBS4 358 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 LRP12Q9Y561 859 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 CSAG2Q9Y5P2 127 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 EML5Q05BV3 1969 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 CPED1A4D0V7 1026 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 A8MWP6 167 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 K7EQS6 105 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 P2RY10O00398 339 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 PHOX2AO14813 284 aa7.36□□□□□ -1.23
CDC42SE1-201ENST00000357235 PPP1R2P9O14990 202 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms