RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 ANXA2P07355 339 aaKnown RBP3.44□□□□□ -1.86
LIG4-201ENST00000356922 DANCRP0C864 163 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 HSMCR30P0CW71 290 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 CELP19835 753 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 PTAFRP25105 342 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 FAM3AP98173 230 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 EGR3Q06889 387 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 POU4F2Q12837 409 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 SNTB2Q13425 540 aaKnown RBP3.44□□□□□ -1.86
LIG4-201ENST00000356922 DAZAP2Q15038 168 aaPredicted RBP3.44□□□□□ -1.86
LIG4-201ENST00000356922 SPHARQ15513 63 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 NEDD8Q15843 81 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 LIPKQ5VXJ0 399 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 CRIP3Q6Q6R5 217 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 TMEM108Q6UXF1 575 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 UNQ6126/PRO20091Q6UXV3 157 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 KCTD8Q6ZWB6 473 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 CCDC36Q8IYA8 594 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 OR5AS1Q8N127 324 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 TSPAN14Q8NG11 270 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 GHSRQ92847 366 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 CMBLQ96DG6 245 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 SLC30A2Q9BRI3 323 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 REPIN1Q9BWE0 567 aaKnown RBP3.44□□□□□ -1.86
LIG4-201ENST00000356922 ESRP2Q9H6T0 727 aaKnown RBP3.44□□□□□ -1.86
LIG4-201ENST00000356922 OBP2BQ9NPH6 170 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 CISD1Q9NZ45 108 aaKnown RBP3.44□□□□□ -1.86
LIG4-201ENST00000356922 OR52A1Q9UKL2 312 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 SF3B6Q9Y3B4 125 aaKnown RBP3.44□□□□□ -1.86
LIG4-201ENST00000356922 TRIM64CA6NLI5 447 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 MYL12BO14950 172 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 PIN1P1O15428 100 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 SULT1C4O75897 302 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 PCSK6P29122 969 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 ALDH3B1P43353 468 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 MMP15P51511 669 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 PSMD7P51665 324 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 PPP1CBP62140 327 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 SLC3A1Q07837 685 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 CARTPTQ16568 116 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 DMKNQ6E0U4 476 aaPredicted RBP3.44□□□□□ -1.86
LIG4-201ENST00000356922 ZNF704Q6ZNC4 412 aaPredicted RBP3.44□□□□□ -1.86
LIG4-201ENST00000356922 TMEM91Q6ZNR0 172 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 RHOUQ7L0Q8 258 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 RPS4Y2Q8TD47 263 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 RPL3LQ92901 407 aaKnown RBP3.44□□□□□ -1.86
LIG4-201ENST00000356922 ADAT3Q96EY9 351 aaPredicted RBP3.44□□□□□ -1.86
LIG4-201ENST00000356922 COQ7Q99807 217 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 OR10A4Q9H209 315 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 CLEC4MQ9H2X3 399 aaPredicted RBP3.44□□□□□ -1.86
LIG4-201ENST00000356922 ZNF696Q9H7X3 374 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 GPR84Q9NQS5 396 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 DCAF16Q9NXF7 216 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 CAB39Q9Y376 341 aaPredicted RBP3.44□□□□□ -1.86
LIG4-201ENST00000356922 TPRKBQ9Y3C4 175 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 ATP23Q9Y6H3 246 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 R4GMQ9 66 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 OGG1O15527 345 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 KRT8P05787 483 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 OR4A8P0C604 315 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 COX5BP10606 129 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 NAT2P11245 290 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 PPP3CBP16298 524 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 GCH1P30793 250 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 RIDAP52758 137 aaKnown RBP3.44□□□□□ -1.86
LIG4-201ENST00000356922 WNT4P56705 351 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 PSMA6P60900 246 aaKnown RBP3.44□□□□□ -1.86
LIG4-201ENST00000356922 TBC1D28Q2M2D7 210 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 ZNF672Q499Z4 452 aaPredicted RBP3.44□□□□□ -1.86
LIG4-201ENST00000356922 BEX5Q5H9J7 111 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 KCTD18Q6PI47 426 aaPredicted RBP3.44□□□□□ -1.86
LIG4-201ENST00000356922 ZNF773Q6PK81 442 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 DEGS2Q6QHC5 323 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 METAP1DQ6UB28 335 aaPredicted RBP3.44□□□□□ -1.86
LIG4-201ENST00000356922 ELMOD2Q8IZ81 293 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 FAM222BQ8WU58 562 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 MARVELD3Q96A59 401 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 FAM71F1Q96KD3 344 aaPredicted RBP3.44□□□□□ -1.86
LIG4-201ENST00000356922 MGLLQ99685 303 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 TBCCD1Q9NVR7 557 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 TREM2Q9NZC2 230 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 RABL2BQ9UNT1 228 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 LAMP3Q9UQV4 416 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 RHBDD3Q9Y3P4 386 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 PCDHGB1Q9Y5G3 927 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 TMEM14AQ9Y6G1 99 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 SETD2Q9BYW2 2564 aaPredicted RBP3.44□□□□□ -1.86
LIG4-201ENST00000356922 IGKV1-9A0A0C4DH69 117 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 TRBV2A0A0J9YWF9 115 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 ZSCAN5BA6NJL1 495 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 LYNX1G3V0Z9 82 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 MLNRO43193 412 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 ATE1O95260 518 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 LYNX1P0DP58 116 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 BMP4P12644 408 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 ZNF250P15622 560 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 FAHP16930 419 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 TGFBR2P37173 567 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 TPTEP56180 551 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 RPS25P62851 125 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms