RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 ZNF429Q86V71 674 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 LYPD6Q86Y78 171 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 TTC9BQ8N6N2 239 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 SPPL3Q8TCT6 385 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 GLYATL1Q969I3 302 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 OR10C1Q96KK4 312 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 ZNF681Q96N22 645 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 SLC2A4RGQ9NR83 387 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 IL36AQ9UHA7 158 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 IL17BQ9UHF5 180 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.87□□□□□ -1.31
CCR9-201ENST00000355983 ZNF727A8MUV8 499 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 E5RGE8 158 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 NFKBIEO00221 500 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 ETV2O00321 342 aaPredicted RBP6.87□□□□□ -1.31
CCR9-201ENST00000355983 CIDEAO60543 219 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 GJB5O95377 273 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 CYB5R3P00387 301 aaPredicted RBP6.87□□□□□ -1.31
CCR9-201ENST00000355983 LIPCP11150 499 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 CD82P27701 267 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 BRS3P32247 399 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 BEX3Q00994 111 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 EIF2B1Q14232 305 aaKnown RBP6.87□□□□□ -1.31
CCR9-201ENST00000355983 ZIC1Q15915 447 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 NKAIN1Q4KMZ8 207 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 CTXN3Q4LDR2 81 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 FAM182BQ5T319 152 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 ZNF343Q6P1L6 599 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 FAM219AQ8IW50 185 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 ZNF679Q8IYX0 411 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 NRSN1Q8IZ57 195 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 NAXEQ8NCW5 288 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 OR4S1Q8NGB4 309 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 ADAD1Q96M93 576 aaKnown RBP6.87□□□□□ -1.31
CCR9-201ENST00000355983 SDF2Q99470 211 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 TRIM2Q9C040 744 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 GPR173Q9NS66 373 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 CKLFQ9UBR5 152 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 NSG2Q9Y328 171 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 EML5Q05BV3 1969 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 GPR137BO60478 399 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 LEFTY1O75610 366 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 TXNDC12O95881 172 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 PPBPP02775 128 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 SLC35G4P0C7Q5 338 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 SLC35G6P0C7Q6 338 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 TMEM225BP0DP42 221 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 OR10J1P30954 320 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 GDI1P31150 447 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 HRH1P35367 487 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 ECI1P42126 302 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 SSR2P43308 183 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 SELENOTP62341 195 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 RPS4XP62701 263 aaKnown RBP6.86□□□□□ -1.31
CCR9-201ENST00000355983 SUPT4H1P63272 117 aaKnown RBP6.86□□□□□ -1.31
CCR9-201ENST00000355983 HLA-DRB3P79483 266 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 PSG6Q00889 435 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 FOXF1Q12946 379 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 SMAD4Q13485 552 aaKnown RBP6.86□□□□□ -1.31
CCR9-201ENST00000355983 SHHQ15465 462 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 ELOA3BQ3SY89 546 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 TMEM225Q6GV28 225 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 TANGO2Q6ICL3 276 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 CATSPERDQ86XM0 798 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 LILRA3Q8N6C8 439 aaPredicted RBP6.86□□□□□ -1.31
CCR9-201ENST00000355983 COX18Q8N8Q8 333 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 APCDD1LQ8NCL9 501 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 BHLHE23Q8NDY6 225 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 ELOA3Q8NG57 546 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 MARCH1Q8TCQ1 289 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 ZNRF4Q8WWF5 429 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 FAM46BQ96A09 425 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 C5orf66Q9H5L9 145 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 PGA4P0DJD7 388 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 PGA5P0DJD9 388 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 FGF5P12034 268 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 RPL4P36578 427 aaKnown RBP6.86□□□□□ -1.31
CCR9-201ENST00000355983 KLF3P57682 345 aaPredicted RBP6.86□□□□□ -1.31
CCR9-201ENST00000355983 PRPS1P60891 318 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 DUSP2Q05923 314 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 ANKRD55Q3KP44 614 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 COL5A1-AS1Q5SY13 56 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 MRPL2Q5T653 305 aaKnown RBP6.86□□□□□ -1.31
CCR9-201ENST00000355983 FCRL6Q6DN72 434 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 TMEM220Q6QAJ8 160 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 DPPA3Q6W0C5 159 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 SAMD7Q7Z3H4 446 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 LHFPL1Q86WI0 220 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 SEMA6DQ8NFY4 1073 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 OR4X1Q8NH49 305 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 KCNE4Q8WWG9 221 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 FGGYQ96C11 551 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 RBMXL1Q96E39 390 aaKnown RBP6.86□□□□□ -1.31
CCR9-201ENST00000355983 ZNF514Q96K75 400 aaPredicted RBP6.86□□□□□ -1.31
CCR9-201ENST00000355983 IMMP2LQ96T52 175 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 MIEN1Q9BRT3 115 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 ZNF2Q9BSG1 426 aaPredicted RBP6.86□□□□□ -1.31
CCR9-201ENST00000355983 PCGF1Q9BSM1 259 aa6.86□□□□□ -1.31
CCR9-201ENST00000355983 METTL8Q9H825 291 aaKnown RBP6.86□□□□□ -1.31
CCR9-201ENST00000355983 WDR76Q9H967 626 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms