RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 GABRR1P24046 479 aa12.14□□□□□ -0.47
TRIM4-203ENST00000355947 RGS19P49795 217 aa12.14□□□□□ -0.47
TRIM4-203ENST00000355947 MECP2P51608 486 aaKnown RBP12.14□□□□□ -0.47
TRIM4-203ENST00000355947 RPS4XP62701 263 aaKnown RBP12.14□□□□□ -0.47
TRIM4-203ENST00000355947 ACY1Q03154 408 aa12.14□□□□□ -0.47
TRIM4-203ENST00000355947 ZNF345Q14585 488 aa12.14□□□□□ -0.47
TRIM4-203ENST00000355947 ZNF141Q15928 474 aa12.14□□□□□ -0.47
TRIM4-203ENST00000355947 MIDNQ504T8 468 aa12.14□□□□□ -0.47
TRIM4-203ENST00000355947 DHRS7BQ6IAN0 325 aaPredicted RBP12.14□□□□□ -0.47
TRIM4-203ENST00000355947 BRICD5Q6PL45 260 aa12.14□□□□□ -0.47
TRIM4-203ENST00000355947 LINC00114Q6XXX2 140 aa12.14□□□□□ -0.47
TRIM4-203ENST00000355947 SUMF1Q8NBK3 374 aa12.14□□□□□ -0.47
TRIM4-203ENST00000355947 APCDD1LQ8NCL9 501 aa12.14□□□□□ -0.47
TRIM4-203ENST00000355947 OR51T1Q8NGJ9 327 aa12.14□□□□□ -0.47
TRIM4-203ENST00000355947 ARHGAP5-AS1Q96IT6 56 aa12.14□□□□□ -0.47
TRIM4-203ENST00000355947 BMFQ96LC9 184 aa12.14□□□□□ -0.47
TRIM4-203ENST00000355947 S100A13Q99584 98 aa12.14□□□□□ -0.47
TRIM4-203ENST00000355947 ALX4Q9H161 411 aaPredicted RBP12.14□□□□□ -0.47
TRIM4-203ENST00000355947 RCC2Q9P258 522 aaKnown RBP12.14□□□□□ -0.47
TRIM4-203ENST00000355947 FCGR2CP31995 323 aa12.14□□□□□ -0.47
TRIM4-203ENST00000355947 OR3A4PP47883 348 aa12.14□□□□□ -0.47
TRIM4-203ENST00000355947 TLE1Q04724 770 aa12.14□□□□□ -0.47
TRIM4-203ENST00000355947 SKP2Q13309 424 aa12.14□□□□□ -0.47
TRIM4-203ENST00000355947 HNF4GQ14541 408 aa12.14□□□□□ -0.47
TRIM4-203ENST00000355947 ANKRD55Q3KP44 614 aa12.14□□□□□ -0.47
TRIM4-203ENST00000355947 ACER2Q5QJU3 275 aa12.14□□□□□ -0.47
TRIM4-203ENST00000355947 TSPO2Q5TGU0 170 aa12.14□□□□□ -0.47
TRIM4-203ENST00000355947 ZNF529Q6P280 563 aa12.14□□□□□ -0.47
TRIM4-203ENST00000355947 CPEB2Q7Z5Q1 589 aaKnown RBP12.14□□□□□ -0.47
TRIM4-203ENST00000355947 PHYHIPLQ96FC7 376 aa12.14□□□□□ -0.47
TRIM4-203ENST00000355947 SLC5A6Q9Y289 635 aa12.14□□□□□ -0.47
TRIM4-203ENST00000355947 MRPS28Q9Y2Q9 187 aaKnown RBP12.14□□□□□ -0.47
TRIM4-203ENST00000355947 TMED7-TICAM2A0A0A6YYA0 188 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 DUS4LO95620 317 aaKnown RBP12.13□□□□□ -0.47
TRIM4-203ENST00000355947 ASAH2BP0C7U1 165 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 SLC25A4P12235 298 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 DMWDQ09019 674 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 UNC119Q13432 240 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 CHRFAM7AQ494W8 412 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 NUP54Q7Z3B4 507 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 OR6S1Q8NH40 331 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 RLN3Q8WXF3 142 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 TGIF2Q9GZN2 237 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 RAB22AQ9UL26 194 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 C7orf77A4D0Y5 90 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 MEGF11A6BM72 1044 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 ATXN7O15265 892 aaPredicted RBP12.13□□□□□ -0.47
TRIM4-203ENST00000355947 CD74P04233 296 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 HNRNPA1P09651 372 aaKnown RBP eCLIP12.13□□□□□ -0.47
TRIM4-203ENST00000355947 PARM1Q6UWI2 310 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.13□□□□□ -0.47
TRIM4-203ENST00000355947 EXD3Q8N9H8 876 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 TERB2Q8NHR7 220 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 SGK3Q96BR1 496 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 ZNF775Q96BV0 537 aaPredicted RBP12.13□□□□□ -0.47
TRIM4-203ENST00000355947 ARL5BQ96KC2 179 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 RHOVQ96L33 236 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 FBXL17Q9UF56 701 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 TMEM184BQ9Y519 407 aaPredicted RBP12.13□□□□□ -0.47
TRIM4-203ENST00000355947 REV3LO60673 3130 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 IGKV1D-43A0A0B4J1Z2 117 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 TMEM150CB9EJG8 249 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 OPRM1P35372 400 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 NSDHLQ15738 373 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 C4orf17Q53FE4 359 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 EIF5AL1Q6IS14 154 aaKnown RBP12.13□□□□□ -0.47
TRIM4-203ENST00000355947 PGAP1Q75T13 922 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 C17orf78Q8N4C9 275 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 FAM213BQ8TBF2 198 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 HIST1H2BAQ96A08 127 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 LRFN5Q96NI6 719 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 TMEM59Q9BXS4 323 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 SEC11CQ9BY50 192 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 POLE3Q9NRF9 147 aa12.13□□□□□ -0.47
TRIM4-203ENST00000355947 PHYHO14832 338 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 PPICP45877 212 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 SNU13P55769 128 aaKnown RBP12.12□□□□□ -0.47
TRIM4-203ENST00000355947 GFERP55789 205 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 PDCD1Q15116 288 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 PHLDA2Q53GA4 152 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 ZNF283Q8N7M2 679 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 WDSUB1Q8N9V3 476 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 FGF14Q92915 247 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 BADQ92934 168 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 MRGPRFQ96AM1 343 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 C1orf198Q9H425 327 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRIM4-203ENST00000355947 PRODH2Q9UF12 536 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 FLVCR1Q9Y5Y0 555 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 RFNGQ9Y644 331 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 WIPF3A6NGB9 483 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 UMAD1C9J7I0 102 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 IFNA4P05014 189 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 CD1AP06126 327 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 BLVRBP30043 206 aaPredicted RBP12.12□□□□□ -0.47
TRIM4-203ENST00000355947 RPL12P30050 165 aaKnown RBP12.12□□□□□ -0.47
TRIM4-203ENST00000355947 NTSR1P30989 418 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 CYCSP99999 105 aaKnown RBP12.12□□□□□ -0.47
TRIM4-203ENST00000355947 ZNF674Q2M3X9 581 aa12.12□□□□□ -0.47
TRIM4-203ENST00000355947 ZNF260Q3ZCT1 412 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms