RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 PTX4Q96A99 478 aa19.9■□□□□ 0.78
SCAMP3-202ENST00000355379 SLC22A4Q9H015 551 aa19.9■□□□□ 0.78
SCAMP3-202ENST00000355379 INPP1P49441 399 aa19.89■□□□□ 0.77
SCAMP3-202ENST00000355379 TMPRSS3P57727 454 aa19.89■□□□□ 0.77
SCAMP3-202ENST00000355379 OR6K3Q8NGY3 331 aa19.89■□□□□ 0.77
SCAMP3-202ENST00000355379 NANOS1Q8WY41 292 aaKnown RBP19.89■□□□□ 0.77
SCAMP3-202ENST00000355379 C1QTNF5Q9BXJ0 243 aa19.89■□□□□ 0.77
SCAMP3-202ENST00000355379 DOCK7Q96N67 2140 aa19.89■□□□□ 0.77
SCAMP3-202ENST00000355379 TMEM272A0A1B0GTI8 110 aa19.88■□□□□ 0.77
SCAMP3-202ENST00000355379 LDLRAD4O15165 306 aa19.88■□□□□ 0.77
SCAMP3-202ENST00000355379 ZNHIT1O43257 154 aa19.88■□□□□ 0.77
SCAMP3-202ENST00000355379 HLA-HP01893 362 aa19.88■□□□□ 0.77
SCAMP3-202ENST00000355379 GABRA1P14867 456 aa19.88■□□□□ 0.77
SCAMP3-202ENST00000355379 ARSBP15848 533 aa19.88■□□□□ 0.77
SCAMP3-202ENST00000355379 SPNP16150 400 aa19.88■□□□□ 0.77
SCAMP3-202ENST00000355379 RFX2P48378 723 aa19.88■□□□□ 0.77
SCAMP3-202ENST00000355379 RAB1AP62820 205 aa19.88■□□□□ 0.77
SCAMP3-202ENST00000355379 MRPS10P82664 201 aaKnown RBP19.88■□□□□ 0.77
SCAMP3-202ENST00000355379 CCBE1Q6UXH8 406 aaPredicted RBP19.88■□□□□ 0.77
SCAMP3-202ENST00000355379 COLCA1Q6ZS62 124 aa19.88■□□□□ 0.77
SCAMP3-202ENST00000355379 REEP6Q96HR9 211 aa19.88■□□□□ 0.77
SCAMP3-202ENST00000355379 C11orf54Q9H0W9 315 aaPredicted RBP19.88■□□□□ 0.77
SCAMP3-202ENST00000355379 CNTD2Q9H8S5 307 aa19.88■□□□□ 0.77
SCAMP3-202ENST00000355379 B3GNT2Q9NY97 397 aa19.88■□□□□ 0.77
SCAMP3-202ENST00000355379 TP53TG5Q9Y2B4 290 aa19.88■□□□□ 0.77
SCAMP3-202ENST00000355379 MRPS7Q9Y2R9 242 aaKnown RBP19.88■□□□□ 0.77
SCAMP3-202ENST00000355379 MBD3L4A6NDZ8 208 aaPredicted RBP19.87■□□□□ 0.77
SCAMP3-202ENST00000355379 MBD3L3A6NE82 208 aaPredicted RBP19.87■□□□□ 0.77
SCAMP3-202ENST00000355379 MBD3L5A6NJ08 208 aaPredicted RBP19.87■□□□□ 0.77
SCAMP3-202ENST00000355379 XRCC3O43542 346 aa19.87■□□□□ 0.77
SCAMP3-202ENST00000355379 XRCC2O43543 280 aa19.87■□□□□ 0.77
SCAMP3-202ENST00000355379 PRF1P14222 555 aa19.87■□□□□ 0.77
SCAMP3-202ENST00000355379 CDK2P24941 298 aa19.87■□□□□ 0.77
SCAMP3-202ENST00000355379 PTGER4P35408 488 aa19.87■□□□□ 0.77
SCAMP3-202ENST00000355379 KIR2DL2P43627 348 aaPredicted RBP19.87■□□□□ 0.77
SCAMP3-202ENST00000355379 PTH2RP49190 550 aa19.87■□□□□ 0.77
SCAMP3-202ENST00000355379 TMEM69Q5SWH9 247 aa19.87■□□□□ 0.77
SCAMP3-202ENST00000355379 ZNF585AQ6P3V2 769 aa19.87■□□□□ 0.77
SCAMP3-202ENST00000355379 CCDC36Q8IYA8 594 aa19.87■□□□□ 0.77
SCAMP3-202ENST00000355379 SEMA6DQ8NFY4 1073 aa19.87■□□□□ 0.77
SCAMP3-202ENST00000355379 OR4D6Q8NGJ1 314 aa19.87■□□□□ 0.77
SCAMP3-202ENST00000355379 MBD3L2Q8NHZ7 208 aaPredicted RBP19.87■□□□□ 0.77
SCAMP3-202ENST00000355379 SSC4DQ8WTU2 575 aa19.87■□□□□ 0.77
SCAMP3-202ENST00000355379 YIPF5Q969M3 257 aa19.87■□□□□ 0.77
SCAMP3-202ENST00000355379 ZFP3Q96NJ6 502 aa19.87■□□□□ 0.77
SCAMP3-202ENST00000355379 EEF1E1O43324 174 aaKnown RBP19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 CTAG2O75638 210 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 CD79AP11912 226 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 RAB6AP20340 208 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 ZNF93P35789 620 aaPredicted RBP19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 BCAP31P51572 246 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 TGFBR3Q03167 851 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 PLP2Q04941 152 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 PLA2G7Q13093 441 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 MZT2BQ6NZ67 158 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 FAM180AQ6UWF9 173 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 NRARPQ7Z6K4 114 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 GCNT2Q8N0V5 402 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 SMIM4Q8WVI0 70 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 AKAP1Q92667 903 aaKnown RBP eCLIP19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 ITFG2Q969R8 447 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 BOD1Q96IK1 185 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 CHST5Q9GZS9 411 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 NOX3Q9HBY0 568 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 DIABLOQ9NR28 239 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 PIGLQ9Y2B2 252 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 LOC100509620A0A075B734 347 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 LINC00854A0A1B0GVQ3 168 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 FUOMA2VDF0 154 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 ZNF503-AS2A6NEH8 195 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 GABARAPH6UMI1 98 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 WDR1O75083 606 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 BPNT1O95861 308 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 MAP2K3P46734 347 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 EFNB2P52799 333 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 TAS2R20P59543 309 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 ZNF57Q68EA5 555 aaPredicted RBP19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 ZNF324BQ6AW86 544 aaPredicted RBP19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 Q6ZT83 130 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 IZUMO1Q8IYV9 350 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 SPSB4Q96A44 273 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 ZC3HAV1LQ96H79 300 aaKnown RBP19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 PLSCR4Q9NRQ2 329 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 FBLN5Q9UBX5 448 aa19.86■□□□□ 0.77
SCAMP3-202ENST00000355379 A0A0A6YYH2 397 aa19.85■□□□□ 0.77
SCAMP3-202ENST00000355379 A6NJ64 397 aa19.85■□□□□ 0.77
SCAMP3-202ENST00000355379 LANCL1O43813 399 aa19.85■□□□□ 0.77
SCAMP3-202ENST00000355379 CRHP06850 196 aa19.85■□□□□ 0.77
SCAMP3-202ENST00000355379 HOXB1P14653 301 aaPredicted RBP19.85■□□□□ 0.77
SCAMP3-202ENST00000355379 STOMP27105 288 aa19.85■□□□□ 0.77
SCAMP3-202ENST00000355379 DGCR2P98153 550 aa19.85■□□□□ 0.77
SCAMP3-202ENST00000355379 RIPPLY1Q0D2K3 151 aa19.85■□□□□ 0.77
SCAMP3-202ENST00000355379 TBRG1Q3YBR2 411 aa19.85■□□□□ 0.77
SCAMP3-202ENST00000355379 SNRNP27Q8WVK2 155 aaKnown RBP19.85■□□□□ 0.77
SCAMP3-202ENST00000355379 EXTL1Q92935 676 aa19.85■□□□□ 0.77
SCAMP3-202ENST00000355379 IGKV1-9A0A0C4DH69 117 aa19.84■□□□□ 0.77
SCAMP3-202ENST00000355379 LYRM1O43325 122 aa19.84■□□□□ 0.77
SCAMP3-202ENST00000355379 PFDN1O60925 122 aa19.84■□□□□ 0.77
SCAMP3-202ENST00000355379 TMIGD3P0DMS9 266 aaPredicted RBP19.84■□□□□ 0.77
SCAMP3-202ENST00000355379 FAHP16930 419 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms