RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 PHYHD1Q5SRE7 291 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 DND1Q8IYX4 353 aaKnown RBP11.91□□□□□ -0.5
SCN8A-202ENST00000355133 OR1L3Q8NH93 324 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 CORO2AQ92828 525 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 FAM173AQ9BQD7 235 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 SOX7Q9BT81 388 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 YBX2Q9Y2T7 364 aaKnown RBP11.91□□□□□ -0.5
SCN8A-202ENST00000355133 ALS2Q96Q42 1657 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 MT-CO3P00414 261 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 LALBAP00709 142 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 FOSL1P15407 271 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 DDOSTP39656 456 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 MNX1P50219 401 aaPredicted RBP11.91□□□□□ -0.5
SCN8A-202ENST00000355133 MLF1P58340 268 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 ZNF705AQ6ZN79 300 aaPredicted RBP11.91□□□□□ -0.5
SCN8A-202ENST00000355133 A0A1B0GUL6 1792 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 RAB19A4D1S5 217 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 TAF1P21675 1872 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 DTYMKP23919 212 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 SUMO3P55854 103 aaPredicted RBP11.91□□□□□ -0.5
SCN8A-202ENST00000355133 PCBP3P57721 371 aaKnown RBP11.91□□□□□ -0.5
SCN8A-202ENST00000355133 DBPQ10586 325 aaPredicted RBP11.91□□□□□ -0.5
SCN8A-202ENST00000355133 ASAH1Q13510 395 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 TCTN1Q2MV58 587 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 SMIM21Q3B7S5 101 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 NRAPQ86VF7 1730 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 SKA3Q8IX90 412 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 NECAP1Q8NC96 275 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 PLPPR2Q96GM1 343 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 FZR1Q9UM11 496 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 ANGPTL7O43827 346 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 PIGPP57054 158 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 ADGRG3Q86Y34 549 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 GNRHR2Q96P88 292 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 VN1R1Q9GZP7 353 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 SMOC1Q9H4F8 434 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 P4HTMQ9NXG6 502 aa11.91□□□□□ -0.5
SCN8A-202ENST00000355133 IGHV5-51A0A0C4DH38 117 aa11.9□□□□□ -0.5
SCN8A-202ENST00000355133 OR7C2O60412 319 aa11.9□□□□□ -0.5
SCN8A-202ENST00000355133 TXNDC12O95881 172 aa11.9□□□□□ -0.5
SCN8A-202ENST00000355133 CRYABP02511 175 aaKnown RBP11.9□□□□□ -0.5
SCN8A-202ENST00000355133 EPHA2P29317 976 aa11.9□□□□□ -0.5
SCN8A-202ENST00000355133 RAB1AP62820 205 aa11.9□□□□□ -0.5
SCN8A-202ENST00000355133 MPPED2Q15777 294 aa11.9□□□□□ -0.5
SCN8A-202ENST00000355133 ST8SIA4Q92187 359 aa11.9□□□□□ -0.5
SCN8A-202ENST00000355133 FBXW5Q969U6 566 aa11.9□□□□□ -0.5
SCN8A-202ENST00000355133 PRDM7Q9NQW5 492 aa11.9□□□□□ -0.5
SCN8A-202ENST00000355133 PSENENQ9NZ42 101 aa11.9□□□□□ -0.5
SCN8A-202ENST00000355133 PLEKHB1Q9UF11 243 aaPredicted RBP11.9□□□□□ -0.5
SCN8A-202ENST00000355133 A4GNTQ9UNA3 340 aa11.9□□□□□ -0.5
SCN8A-202ENST00000355133 OR2Z1Q8NG97 314 aa11.9□□□□□ -0.5
SCN8A-202ENST00000355133 TMED6Q8WW62 240 aa11.9□□□□□ -0.5
SCN8A-202ENST00000355133 FBXL4Q9UKA2 621 aa11.9□□□□□ -0.5
SCN8A-202ENST00000355133 STRAPQ9Y3F4 350 aaKnown RBP11.9□□□□□ -0.5
SCN8A-202ENST00000355133 ATF1P18846 271 aa11.9□□□□□ -0.5
SCN8A-202ENST00000355133 YBX1P67809 324 aaKnown RBP11.9□□□□□ -0.5
SCN8A-202ENST00000355133 FAHD1Q6P587 224 aa11.9□□□□□ -0.5
SCN8A-202ENST00000355133 FAM58AQ8N1B3 248 aa11.9□□□□□ -0.5
SCN8A-202ENST00000355133 LFNGQ8NES3 379 aa11.9□□□□□ -0.5
SCN8A-202ENST00000355133 GPX8Q8TED1 209 aa11.9□□□□□ -0.5
SCN8A-202ENST00000355133 TMEM230Q96A57 120 aa11.9□□□□□ -0.5
SCN8A-202ENST00000355133 RHNO1Q9BSD3 238 aa11.9□□□□□ -0.5
SCN8A-202ENST00000355133 CHST6Q9GZX3 395 aa11.9□□□□□ -0.5
SCN8A-202ENST00000355133 GSG1Q2KHT4 349 aa11.9□□□□□ -0.51
SCN8A-202ENST00000355133 FAM122BQ7Z309 247 aa11.9□□□□□ -0.51
SCN8A-202ENST00000355133 GLCCI1Q86VQ1 547 aa11.9□□□□□ -0.51
SCN8A-202ENST00000355133 C14orf79Q96F83 325 aa11.9□□□□□ -0.51
SCN8A-202ENST00000355133 PLCH1Q4KWH8 1693 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 ARRDC5A6NEK1 342 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 SLC31A2O15432 143 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 RPL12P30050 165 aaKnown RBP11.89□□□□□ -0.51
SCN8A-202ENST00000355133 MEOX1P50221 254 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 FUT6P51993 359 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 TAS2R45P59539 299 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 SLC25A35Q3KQZ1 300 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 MOB3BQ86TA1 216 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 CADM4Q8NFZ8 388 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 OR2I1PQ8NGU4 316 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 NTN4Q9HB63 628 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 SSC5DA1L4H1 1573 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 HSPB2A8KAH6 182 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 OR4E1P0C645 316 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 SLC25A6P12236 298 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 PSMB6P28072 239 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 ZNF83P51522 516 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 ZNF117Q03924 483 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 PDCD1Q15116 288 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 HSPB2Q16082 182 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 OR10AD1Q8NGE0 317 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 OR1F12Q8NHA8 337 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 TAAR6Q96RI8 345 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 ONECUT1Q9UBC0 465 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 DCTDP32321 178 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 FAM27D1Q5T7N8 215 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 DRAM2Q6UX65 266 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 CADM3Q8N126 398 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 OR10V1Q8NGI7 309 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 APOBEC3DQ96AK3 386 aaPredicted RBP11.89□□□□□ -0.51
SCN8A-202ENST00000355133 TMEM231Q9H6L2 316 aa11.89□□□□□ -0.51
SCN8A-202ENST00000355133 LRP12Q9Y561 859 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms