RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 SEBOXQ9HB31 216 aaPredicted RBP5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 POMT1Q9Y6A1 747 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 A0A1W2PPQ1 181 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 OR5AL1P0C617 328 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 ADPRHP54922 357 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 INSM1Q01101 510 aaPredicted RBP5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 SLC17A1Q14916 467 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 OSR2Q8N2R0 312 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 TMED6Q8WW62 240 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 PDXPQ96GD0 296 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 ADGRG7Q96K78 797 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 TOX2Q96NM4 488 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 CACNA1DQ01668 2161 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 PHOX2AO14813 284 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 C2orf50Q96LR7 162 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 HELTA6NFD8 242 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 TARM1B6A8C7 271 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 HSBP1O75506 76 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 LSM11P83369 360 aaKnown RBP eCLIP5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 SPATA46Q5T0L3 261 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 UBE2ZQ9H832 354 aaPredicted RBP5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 USP3Q9Y6I4 520 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 TRIP11Q15643 1979 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 PMCHP20382 165 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 GPM6AP51674 278 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 TGIF2LXQ8IUE1 241 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 SLC16A11Q8NCK7 471 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 OR5M9Q8NGP3 310 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 NXF2Q9GZY0 626 aaKnown RBP5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 MAGT1Q9H0U3 335 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 RPL12P30050 165 aaKnown RBP5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 TMEM207Q6UWW9 146 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 FBXO17Q96EF6 278 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 CXorf58Q96LI9 332 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 IGKV6D-21A0A0A0MT36 114 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 C5orf52A6NGY3 159 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 CYR61O00622 381 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 PLPP1O14494 284 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 OR2Z1Q8NG97 314 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 C8orf44Q96CB5 159 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 PLEKHA2Q9HB19 425 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 HINT3Q9NQE9 182 aaKnown RBP5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 SLC25A26Q70HW3 274 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 ZC3H12DA2A288 527 aaKnown RBP5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 IDSB3KWA1 339 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 FOXC1Q12948 553 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 SLC36A1Q7Z2H8 476 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 SPTA1P02549 2419 aa5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 XRN1Q8IZH2 1706 aaKnown RBP5.25□□□□□ -1.57
SRGAP1-201ENST00000355086 A0A087WV62 115 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 POU3F3P20264 500 aaPredicted RBP5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 CST5P28325 142 aaPredicted RBP5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 PFN3P60673 137 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 BTG1P62324 171 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 TMEM131LA2VDJ0 1609 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 LOC102724200A0A096LPH7 203 aaPredicted RBP5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 A0A1B0GVG6 124 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 TRIM77I1YAP6 450 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 GNG10P50151 68 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 EMCNQ9ULC0 261 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 ZNF195O14628 629 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 PTBP1P26599 531 aaKnown RBP eCLIP5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 IQCJQ1A5X6 159 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 CALHM3Q86XJ0 350 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 SFTPA2Q8IWL1 248 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 SFTPA1Q8IWL2 248 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 TBC1D29Q9UFV1 150 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 TRAPPC4Q9Y296 219 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 CRYABP02511 175 aaKnown RBP5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 NME1P15531 152 aaKnown RBP5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 ZNF121P58317 390 aaPredicted RBP5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 FFAR4Q5NUL3 377 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 B3GNTL1Q67FW5 361 aaPredicted RBP5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 CLEC9AQ6UXN8 241 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 CLDN23Q96B33 292 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 DUS3LQ96G46 650 aaKnown RBP5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 TMEM56Q96MV1 263 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 ST3GAL6Q9Y274 331 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 OR2T8A6NH00 312 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 MMP11P24347 488 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 OR2A2Q6IF42 318 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 TGIF2LYQ8IUE0 185 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 PARD6AQ9NPB6 346 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 LOXL2Q9Y4K0 774 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 NAV1Q8NEY1 1877 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 HTN1P15515 57 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 ZNF574Q6ZN55 896 aaPredicted RBP5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 KIAA1958Q8N8K9 716 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 CA5BP1Q8WTZ4 195 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 TRIOBPQ9H2D6 2365 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 PIGAP37287 484 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 SHBQ15464 509 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 CEBPEQ15744 281 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 ETFRF1Q6IPR1 90 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 RBPMS2Q6ZRY4 209 aaKnown RBP5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 DHRS4Q9BTZ2 278 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 NAA50Q9GZZ1 169 aaKnown RBP5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 FZR1Q9UM11 496 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 CCKARP32238 428 aa5.24□□□□□ -1.57
SRGAP1-201ENST00000355086 FDX2Q6P4F2 183 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms