RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 KIR2DS2P43631 304 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 PNLIPRP2P54317 469 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 ZNF124Q15973 351 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 BCL2L2Q92843 193 aaPredicted RBP11.49□□□□□ -0.57
COL6A3-203ENST00000353578 ABHD14BQ96IU4 210 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 CALHM2Q9HA72 323 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 KIAA1456Q9P272 454 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 TUSC2O75896 110 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 SPNP16150 400 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 PAX5Q02548 391 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 PLPPR5Q32ZL2 321 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 LINC00303Q3SY05 128 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 STAC2Q6ZMT1 411 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 ZFYVE21Q9BQ24 234 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 WIPI2Q9Y4P8 454 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 SNED1Q8TER0 1413 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 H3BMH7 237 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 CARD18P57730 90 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 HLA-DQA1P01909 254 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 P04436 131 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 CLEC2LP0C7M8 214 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 PPIAP62937 165 aaKnown RBP11.48□□□□□ -0.57
COL6A3-203ENST00000353578 LCN15Q6UWW0 184 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 SYT9Q86SS6 491 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 OR5K2Q8NHB8 316 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 PP6455Q8WZ26 134 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 ARRDC3Q96B67 414 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 FAM3AP98173 230 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 NSDHLQ15738 373 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 FDX2Q6P4F2 183 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 FAM174AQ8TBP5 190 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 TEAD3Q99594 435 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 IL21Q9HBE4 155 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 VAX2Q9UIW0 290 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 SLC5A10A0PJK1 596 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 KDM4EB2RXH2 506 aaPredicted RBP11.48□□□□□ -0.57
COL6A3-203ENST00000353578 PLPP2O43688 288 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 ZNF737O75373 536 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 ST3GAL2Q16842 350 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 DNLZQ5SXM8 178 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 PWWP2BQ6NUJ5 590 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 CLEC4DQ8WXI8 215 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 SAP30LQ9HAJ7 183 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 CFHP08603 1231 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 HTR6P50406 440 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 SMAGPQ0VAQ4 97 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 MFAP5Q13361 173 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 PARM1Q6UWI2 310 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 BCL2L10Q9HD36 194 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 FBXL12Q9NXK8 326 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 USP54Q70EL1 1684 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 VAMP5O95183 116 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 RECKO95980 971 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 OR5G3P0C626 314 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 NBPF12Q5TAG4 269 aaPredicted RBP11.48□□□□□ -0.57
COL6A3-203ENST00000353578 CXCL17Q6UXB2 119 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 LBX2Q6XYB7 198 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 OR2M3Q8NG83 312 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 NEIL2Q969S2 332 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 CFAP20Q9Y6A4 193 aaKnown RBP11.48□□□□□ -0.57
COL6A3-203ENST00000353578 CD3DP04234 171 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 COX6CP09669 75 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 NID1P14543 1247 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 TBXA2RP21731 343 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 GPR32P1Q8NGA4 272 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 IKZF4Q9H2S9 585 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 GPR75O95800 540 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 DSC1Q08554 894 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 ZNF252P-AS1Q0IIN9 211 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 PHLDA2Q53GA4 152 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 ALKBH2Q6NS38 261 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 LRRC15Q8TF66 581 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 IL17CQ9P0M4 197 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 GABRQQ9UN88 632 aa11.48□□□□□ -0.57
COL6A3-203ENST00000353578 BMPR1BO00238 502 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 ADAP1O75689 374 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 EDN1P05305 212 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 CLDN12P56749 244 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 FAM57BQ71RH2 274 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 PLXDC1Q8IUK5 500 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 RTN4IP1Q8WWV3 396 aaPredicted RBP11.47□□□□□ -0.57
COL6A3-203ENST00000353578 OR2A5Q96R48 311 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 POLDIP2Q9Y2S7 368 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 CBR3O75828 277 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 HLA-GP17693 338 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 CRYBB2P43320 205 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 MMP16P51512 607 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 PIPOXQ9P0Z9 390 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 WNK2Q9Y3S1 2297 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 A0A0D9SEW6 157 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 OR4Q2P0C623 313 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 ZNF765Q7L2R6 523 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 RTL10Q7L3V2 364 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 ZNF687Q8N1G0 1237 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 FKRPQ9H9S5 495 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 SAMD7Q7Z3H4 446 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 ARL14EPQ8N8R7 260 aaPredicted RBP11.47□□□□□ -0.57
COL6A3-203ENST00000353578 TINAGL1Q9GZM7 467 aaPredicted RBP11.47□□□□□ -0.57
COL6A3-203ENST00000353578 PRSS50Q9UI38 385 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 CORTO00230 105 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms