RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 SNAPC5O75971 98 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 ANXA7P20073 488 aaKnown RBP12.23□□□□□ -0.45
SMC6-201ENST00000351948 GZMMP51124 257 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 CAMK2BQ13554 666 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 LSRQ86X29 649 aaPredicted RBP12.23□□□□□ -0.45
SMC6-201ENST00000351948 LYSMD2Q8IV50 215 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 DYNC2LI1Q8TCX1 351 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 FGF11Q92914 225 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 RAB39BQ96DA2 213 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 YIPF6Q96EC8 236 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 SUCNR1Q9BXA5 334 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 SMLR1H3BR10 107 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 IMPA2O14732 288 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 HES1Q14469 280 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 POU4F3Q15319 338 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 OR2M7Q8NG81 312 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 OR56B2PQ8NGI1 322 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 APH1BQ8WW43 257 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 HES7Q9BYE0 225 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 AUNIPQ9H7T9 357 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 ST3GAL6Q9Y274 331 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 CCDC88CQ9P219 2028 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 CD79BP40259 229 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 MVDP53602 400 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 CLDN20P56880 219 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 MLF1P58340 268 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 FAM198BQ6UWH4 519 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 C20orf196Q8IYI0 205 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 OR2Z1Q8NG97 314 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 RHOUQ7L0Q8 258 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 OR2M3Q8NG83 312 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 SIAEQ9HAT2 523 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 SLC23A1Q9UHI7 598 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 THSD7BQ9C0I4 1608 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 CCSO14618 274 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 SPINT2O43291 252 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 WDR1O75083 606 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 CHRM2P08172 466 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 CA6P23280 308 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 SLC25A1P53007 311 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 FOXJ2Q9P0K8 574 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 POLDIP2Q9Y2S7 368 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 MN1Q10571 1320 aaPredicted RBP12.22□□□□□ -0.45
SMC6-201ENST00000351948 SULT1B1O43704 296 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 TMIGD3P0DMS9 266 aaPredicted RBP12.22□□□□□ -0.45
SMC6-201ENST00000351948 IL11P20809 199 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 HTR2BP41595 481 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 UBE2MP61081 183 aaKnown RBP12.22□□□□□ -0.45
SMC6-201ENST00000351948 CLPPQ16740 277 aaPredicted RBP12.22□□□□□ -0.45
SMC6-201ENST00000351948 CLVS2Q5SYC1 327 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 SLAMF9Q96A28 289 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 APOBEC3DQ96AK3 386 aaPredicted RBP12.22□□□□□ -0.45
SMC6-201ENST00000351948 CLDN23Q96B33 292 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 SNX18Q96RF0 628 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 HAO2Q9NYQ3 351 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 A0A1W2PQD3 144 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 EPPINO95925 133 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 LIFP15018 202 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 MGMTP16455 207 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 BAMBIQ13145 260 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 SLC30A7Q8NEW0 376 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 LIN37Q96GY3 246 aaPredicted RBP12.22□□□□□ -0.45
SMC6-201ENST00000351948 PTDSS2Q9BVG9 487 aa12.22□□□□□ -0.45
SMC6-201ENST00000351948 GP1BAP07359 652 aa12.21□□□□□ -0.45
SMC6-201ENST00000351948 ACAA2P42765 397 aaKnown RBP12.21□□□□□ -0.45
SMC6-201ENST00000351948 ZNF133P52736 654 aaPredicted RBP12.21□□□□□ -0.45
SMC6-201ENST00000351948 FUT5Q11128 374 aa12.21□□□□□ -0.45
SMC6-201ENST00000351948 XAF1Q6GPH4 301 aa12.21□□□□□ -0.45
SMC6-201ENST00000351948 NOXA1Q86UR1 476 aa12.21□□□□□ -0.45
SMC6-201ENST00000351948 ZNF573Q86YE8 665 aa12.21□□□□□ -0.45
SMC6-201ENST00000351948 LSMEM1Q8N8F7 131 aa12.21□□□□□ -0.45
SMC6-201ENST00000351948 OR2B2Q9GZK3 357 aa12.21□□□□□ -0.45
SMC6-201ENST00000351948 TOR1AO14656 332 aa12.21□□□□□ -0.45
SMC6-201ENST00000351948 LGALS4P56470 323 aa12.21□□□□□ -0.45
SMC6-201ENST00000351948 SFRP5Q5T4F7 317 aa12.21□□□□□ -0.45
SMC6-201ENST00000351948 WDR88Q6ZMY6 472 aa12.21□□□□□ -0.45
SMC6-201ENST00000351948 SGK3Q96BR1 496 aa12.21□□□□□ -0.45
SMC6-201ENST00000351948 ZNF816-ZNF321PA0A0X1KG74 233 aa12.21□□□□□ -0.46
SMC6-201ENST00000351948 FBXO24O75426 580 aa12.21□□□□□ -0.46
SMC6-201ENST00000351948 EPXP11678 715 aa12.21□□□□□ -0.46
SMC6-201ENST00000351948 FGF5P12034 268 aa12.21□□□□□ -0.46
SMC6-201ENST00000351948 SELEP16581 610 aa12.21□□□□□ -0.46
SMC6-201ENST00000351948 TUBG1P23258 451 aa12.21□□□□□ -0.46
SMC6-201ENST00000351948 CATR1Q13166 79 aa12.21□□□□□ -0.46
SMC6-201ENST00000351948 FCN2Q15485 313 aa12.21□□□□□ -0.46
SMC6-201ENST00000351948 AADACL4Q5VUY2 407 aa12.21□□□□□ -0.46
SMC6-201ENST00000351948 BRICD5Q6PL45 260 aa12.21□□□□□ -0.46
SMC6-201ENST00000351948 OR5H6Q8NGV6 325 aa12.21□□□□□ -0.46
SMC6-201ENST00000351948 PCNPQ8WW12 178 aaKnown RBP12.21□□□□□ -0.46
SMC6-201ENST00000351948 BOD1Q96IK1 185 aa12.21□□□□□ -0.46
SMC6-201ENST00000351948 PDCD11Q14690 1871 aaKnown RBP12.21□□□□□ -0.46
SMC6-201ENST00000351948 IGHV1-45A0A0A0MS14 117 aa12.21□□□□□ -0.46
SMC6-201ENST00000351948 SP1P08047 785 aa12.21□□□□□ -0.46
SMC6-201ENST00000351948 BDH1Q02338 343 aa12.21□□□□□ -0.46
SMC6-201ENST00000351948 GUCA2AQ02747 115 aa12.21□□□□□ -0.46
SMC6-201ENST00000351948 PLXDC2Q6UX71 529 aa12.21□□□□□ -0.46
SMC6-201ENST00000351948 FAM109AQ8N4B1 249 aa12.21□□□□□ -0.46
SMC6-201ENST00000351948 OR51A2Q8NGJ7 313 aa12.21□□□□□ -0.46
SMC6-201ENST00000351948 PTP4A1Q93096 173 aa12.21□□□□□ -0.46
SMC6-201ENST00000351948 COPS3Q9UNS2 423 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms