RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 LAP3P28838 519 aa16.02■□□□□ 0.16
PTP4A3-202ENST00000349124 SRSF3P84103 164 aaKnown RBP16.02■□□□□ 0.16
PTP4A3-202ENST00000349124 RIPPLY1Q0D2K3 151 aa16.02■□□□□ 0.16
PTP4A3-202ENST00000349124 PAN3Q58A45 887 aaKnown RBP16.02■□□□□ 0.16
PTP4A3-202ENST00000349124 ANKRD37Q7Z713 158 aa16.02■□□□□ 0.16
PTP4A3-202ENST00000349124 ARMC10Q8N2F6 343 aa16.02■□□□□ 0.16
PTP4A3-202ENST00000349124 NFAM1Q8NET5 270 aaPredicted RBP16.02■□□□□ 0.16
PTP4A3-202ENST00000349124 POC1BQ8TC44 478 aa16.02■□□□□ 0.16
PTP4A3-202ENST00000349124 ST8SIA1Q92185 356 aa16.02■□□□□ 0.16
PTP4A3-202ENST00000349124 RNF126Q9BV68 326 aa16.02■□□□□ 0.16
PTP4A3-202ENST00000349124 ZNF107Q9UII5 783 aaPredicted RBP16.02■□□□□ 0.16
PTP4A3-202ENST00000349124 SDK2Q58EX2 2172 aa16.02■□□□□ 0.15
PTP4A3-202ENST00000349124 H0YIZ8 118 aa16.02■□□□□ 0.15
PTP4A3-202ENST00000349124 DUX1O43812 170 aa16.02■□□□□ 0.15
PTP4A3-202ENST00000349124 BPNT1O95861 308 aa16.02■□□□□ 0.15
PTP4A3-202ENST00000349124 ZNF345Q14585 488 aa16.02■□□□□ 0.15
PTP4A3-202ENST00000349124 LPCAT3Q6P1A2 487 aa16.02■□□□□ 0.15
PTP4A3-202ENST00000349124 OR10G3Q8NGC4 313 aa16.02■□□□□ 0.15
PTP4A3-202ENST00000349124 NPRL2Q8WTW4 380 aa16.02■□□□□ 0.15
PTP4A3-202ENST00000349124 DDIT4LQ96D03 193 aa16.02■□□□□ 0.15
PTP4A3-202ENST00000349124 GPR84Q9NQS5 396 aa16.02■□□□□ 0.15
PTP4A3-202ENST00000349124 ASF1BQ9NVP2 202 aa16.02■□□□□ 0.15
PTP4A3-202ENST00000349124 HLA-GP17693 338 aa16.01■□□□□ 0.15
PTP4A3-202ENST00000349124 ZNF121P58317 390 aaPredicted RBP16.01■□□□□ 0.15
PTP4A3-202ENST00000349124 DTX1Q86Y01 620 aa16.01■□□□□ 0.15
PTP4A3-202ENST00000349124 ZDHHC22Q8N966 263 aa16.01■□□□□ 0.15
PTP4A3-202ENST00000349124 INO80EQ8NBZ0 244 aaPredicted RBP16.01■□□□□ 0.15
PTP4A3-202ENST00000349124 OR5AP2Q8NGF4 316 aa16.01■□□□□ 0.15
PTP4A3-202ENST00000349124 OR8B12Q8NGG6 310 aa16.01■□□□□ 0.15
PTP4A3-202ENST00000349124 C1orf147Q96MC9 270 aaPredicted RBP16.01■□□□□ 0.15
PTP4A3-202ENST00000349124 GLS2Q9UI32 602 aa16.01■□□□□ 0.15
PTP4A3-202ENST00000349124 LHX6Q9UPM6 363 aa16.01■□□□□ 0.15
PTP4A3-202ENST00000349124 MRPS28Q9Y2Q9 187 aaKnown RBP16.01■□□□□ 0.15
PTP4A3-202ENST00000349124 SDCBPO00560 298 aaPredicted RBP16.01■□□□□ 0.15
PTP4A3-202ENST00000349124 ZNF20P17024 532 aa16.01■□□□□ 0.15
PTP4A3-202ENST00000349124 SFTPDP35247 375 aa16.01■□□□□ 0.15
PTP4A3-202ENST00000349124 C1QL2Q7Z5L3 287 aa16.01■□□□□ 0.15
PTP4A3-202ENST00000349124 CHMP1AQ9HD42 196 aaPredicted RBP16.01■□□□□ 0.15
PTP4A3-202ENST00000349124 RPH3AQ9Y2J0 694 aaPredicted RBP16.01■□□□□ 0.15
PTP4A3-202ENST00000349124 A0A0B4J2A0 478 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 GPR31O00270 319 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 GIMD1P0DJR0 217 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 PSMB6P28072 239 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 CLRN1P58418 232 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 ZNF529Q6P280 563 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 C5orf46Q6UWT4 87 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 TMEM200AQ86VY9 491 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 ELP5Q8TE02 316 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 DCUN1D4Q92564 292 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 TMEM230Q96A57 120 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 C5orf66Q9H5L9 145 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 AKIRIN1Q9H9L7 192 aaPredicted RBP16■□□□□ 0.15
PTP4A3-202ENST00000349124 SHPKQ9UHJ6 478 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 CELSR3Q9NYQ7 3312 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 ARPC4-TTLL3A0A0A6YYG9 625 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 MSGN1A6NI15 193 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 DUS4LO95620 317 aaKnown RBP16■□□□□ 0.15
PTP4A3-202ENST00000349124 CRHP06850 196 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 HEXBP07686 556 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 TMEM88Q6PEY1 159 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 ZNF574Q6ZN55 896 aaPredicted RBP16■□□□□ 0.15
PTP4A3-202ENST00000349124 HOGA1Q86XE5 327 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 PAQR8Q8TEZ7 354 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 ARHGAP5-AS1Q96IT6 56 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 OR5B2Q96R09 309 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 UQCC2Q9BRT2 126 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 ST6GALNAC5Q9BVH7 336 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 B3GALT5Q9Y2C3 310 aa16■□□□□ 0.15
PTP4A3-202ENST00000349124 HTR3BO95264 441 aa15.99■□□□□ 0.15
PTP4A3-202ENST00000349124 FAM57BQ71RH2 274 aa15.99■□□□□ 0.15
PTP4A3-202ENST00000349124 TERB2Q8NHR7 220 aa15.99■□□□□ 0.15
PTP4A3-202ENST00000349124 RAB3CQ96E17 227 aa15.99■□□□□ 0.15
PTP4A3-202ENST00000349124 LIN37Q96GY3 246 aaPredicted RBP15.99■□□□□ 0.15
PTP4A3-202ENST00000349124 PPP4R1LQ9P1A2 415 aa15.99■□□□□ 0.15
PTP4A3-202ENST00000349124 RALGAPA1Q6GYQ0 2036 aa15.99■□□□□ 0.15
PTP4A3-202ENST00000349124 OR2J2O76002 312 aa15.99■□□□□ 0.15
PTP4A3-202ENST00000349124 F12P00748 615 aaPredicted RBP15.99■□□□□ 0.15
PTP4A3-202ENST00000349124 GLULP15104 373 aa15.99■□□□□ 0.15
PTP4A3-202ENST00000349124 LCN10Q6JVE6 187 aa15.99■□□□□ 0.15
PTP4A3-202ENST00000349124 ZSCAN4Q8NAM6 433 aaPredicted RBP15.99■□□□□ 0.15
PTP4A3-202ENST00000349124 MARC2Q969Z3 335 aa15.99■□□□□ 0.15
PTP4A3-202ENST00000349124 DNTTIP1Q9H147 329 aa15.99■□□□□ 0.15
PTP4A3-202ENST00000349124 ALKBH4Q9NXW9 302 aa15.99■□□□□ 0.15
PTP4A3-202ENST00000349124 KLHL13Q9P2N7 655 aa15.99■□□□□ 0.15
PTP4A3-202ENST00000349124 IGKV1-9A0A0C4DH69 117 aa15.98■□□□□ 0.15
PTP4A3-202ENST00000349124 DBX1A6NMT0 343 aa15.98■□□□□ 0.15
PTP4A3-202ENST00000349124 CDC14BO60729 498 aa15.98■□□□□ 0.15
PTP4A3-202ENST00000349124 CRTAPO75718 401 aaPredicted RBP15.98■□□□□ 0.15
PTP4A3-202ENST00000349124 HCKP08631 526 aa15.98■□□□□ 0.15
PTP4A3-202ENST00000349124 PGA4P0DJD7 388 aa15.98■□□□□ 0.15
PTP4A3-202ENST00000349124 PGA3P0DJD8 388 aa15.98■□□□□ 0.15
PTP4A3-202ENST00000349124 NAT1P18440 290 aa15.98■□□□□ 0.15
PTP4A3-202ENST00000349124 P2RY4P51582 365 aa15.98■□□□□ 0.15
PTP4A3-202ENST00000349124 SMAD4Q13485 552 aaKnown RBP15.98■□□□□ 0.15
PTP4A3-202ENST00000349124 GUCA2BQ16661 112 aa15.98■□□□□ 0.15
PTP4A3-202ENST00000349124 MISPQ8IVT2 679 aa15.98■□□□□ 0.15
PTP4A3-202ENST00000349124 UEVLDQ8IX04 471 aa15.98■□□□□ 0.15
PTP4A3-202ENST00000349124 OR4K17Q8NGC6 315 aa15.98■□□□□ 0.15
PTP4A3-202ENST00000349124 OR2AJ1Q8NGZ0 328 aa15.98■□□□□ 0.15
PTP4A3-202ENST00000349124 TMED6Q8WW62 240 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms