RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 TCTN2Q96GX1 697 aa13.54□□□□□ -0.24
PTBP1-201ENST00000349038 PACRGQ96M98 296 aaPredicted RBP13.54□□□□□ -0.24
PTBP1-201ENST00000349038 MRI1Q9BV20 369 aa13.54□□□□□ -0.24
PTBP1-201ENST00000349038 OR11A1Q9GZK7 315 aa13.54□□□□□ -0.24
PTBP1-201ENST00000349038 TMEM100Q9NV29 134 aa13.54□□□□□ -0.24
PTBP1-201ENST00000349038 ARHGAP21Q5T5U3 1957 aa13.54□□□□□ -0.24
PTBP1-201ENST00000349038 KIAA2026Q5HYC2 2103 aa13.54□□□□□ -0.24
PTBP1-201ENST00000349038 CDC14CA4D256 554 aa13.54□□□□□ -0.24
PTBP1-201ENST00000349038 B3GALT2O43825 422 aa13.54□□□□□ -0.24
PTBP1-201ENST00000349038 HIST1H1BP16401 226 aaKnown RBP13.54□□□□□ -0.24
PTBP1-201ENST00000349038 PEBP1P30086 187 aaKnown RBP13.54□□□□□ -0.24
PTBP1-201ENST00000349038 DHPSP49366 369 aaPredicted RBP13.54□□□□□ -0.24
PTBP1-201ENST00000349038 RHEBQ15382 184 aa13.54□□□□□ -0.24
PTBP1-201ENST00000349038 ADGRE4PQ86SQ3 457 aa13.54□□□□□ -0.24
PTBP1-201ENST00000349038 TUBA4BQ9H853 241 aa13.54□□□□□ -0.24
PTBP1-201ENST00000349038 TIMM10BQ9Y5J6 103 aa13.54□□□□□ -0.24
PTBP1-201ENST00000349038 MAP1BP46821 2468 aaKnown RBP13.54□□□□□ -0.24
PTBP1-201ENST00000349038 EREGO14944 169 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 COX5BP10606 129 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 ADH5P11766 374 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 TACR3P29371 465 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 CRABP1P29762 137 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 GGTLC2Q14390 218 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 GGNBP1Q5YKI7 109 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 TANGO2Q6ICL3 276 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 CBLN3Q6UW01 205 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 PLXDC2Q6UX71 529 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 DPY19L2P2Q6ZN68 376 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.53□□□□□ -0.24
PTBP1-201ENST00000349038 GAL3ST4Q96RP7 486 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 KLHDC3Q9BQ90 382 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 ABHD14AQ9BUJ0 271 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.53□□□□□ -0.249e-7■□□□□ 10.5
PTBP1-201ENST00000349038 SERTAD3Q9UJW9 196 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 CYP8B1Q9UNU6 501 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 HIST1H2BKO60814 126 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 RENP00797 406 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 IFNA10P01566 189 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 CD5P06127 495 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 HIST1H2BJP06899 126 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 FOLR2P14207 255 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 MMP9P14780 707 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 AMY2BP19961 511 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 HIST1H2BOP23527 126 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 HIST1H2BBP33778 126 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 PPM1AP35813 382 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 P2RY2P41231 377 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 EMP2P54851 167 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 HIST1H2BDP58876 126 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 HIST1H2BCP62807 126 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 HIST2H2BEQ16778 126 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.53□□□□□ -0.24
PTBP1-201ENST00000349038 TSPO2Q5TGU0 170 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 RPS4Y2Q8TD47 263 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 HIST1H2BHQ93079 126 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 OR2M4Q96R27 311 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 HIST1H2BNQ99877 126 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 HIST1H2BMQ99879 126 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 RAB11FIP5Q9BXF6 653 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 CNTD2Q9H8S5 307 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 CBLN4Q9NTU7 201 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 HS3ST3B1Q9Y662 390 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 BTF3P20290 206 aaKnown RBP13.53□□□□□ -0.24
PTBP1-201ENST00000349038 S1PR1P21453 382 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 CMPK1P30085 196 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 STARD6P59095 220 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 CYCSP99999 105 aaKnown RBP13.53□□□□□ -0.24
PTBP1-201ENST00000349038 OR5T1Q8NG75 326 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 OR52N4Q8NGI2 321 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 Q8WTZ3 238 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 METTL21AQ8WXB1 218 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 RNF166Q96A37 237 aaPredicted RBP13.53□□□□□ -0.24
PTBP1-201ENST00000349038 TMEM68Q96MH6 324 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 LRRC3BQ96PB8 259 aa13.53□□□□□ -0.24
PTBP1-201ENST00000349038 OR5H15A6NDH6 313 aa13.52□□□□□ -0.24
PTBP1-201ENST00000349038 OR5H1A6NKK0 313 aa13.52□□□□□ -0.24
PTBP1-201ENST00000349038 IFNL4K9M1U5 179 aa13.52□□□□□ -0.24
PTBP1-201ENST00000349038 PGA4P0DJD7 388 aa13.52□□□□□ -0.24
PTBP1-201ENST00000349038 PGA5P0DJD9 388 aa13.52□□□□□ -0.24
PTBP1-201ENST00000349038 ACAA2P42765 397 aaKnown RBP13.52□□□□□ -0.24
PTBP1-201ENST00000349038 FXYD4P59646 89 aa13.52□□□□□ -0.24
PTBP1-201ENST00000349038 RPL18Q07020 188 aaKnown RBP13.52□□□□□ -0.24
PTBP1-201ENST00000349038 ASPHD2Q6ICH7 369 aa13.52□□□□□ -0.24
PTBP1-201ENST00000349038 PRSS54Q6PEW0 395 aa13.52□□□□□ -0.24
PTBP1-201ENST00000349038 TMEM123Q8N131 208 aa13.52□□□□□ -0.24
PTBP1-201ENST00000349038 CDRT4Q8N9R6 151 aa13.52□□□□□ -0.24
PTBP1-201ENST00000349038 EHFQ9NZC4 300 aa13.52□□□□□ -0.24
PTBP1-201ENST00000349038 CHD7Q9P2D1 2997 aa13.52□□□□□ -0.25
PTBP1-201ENST00000349038 MUC22E2RYF6 1773 aaPredicted RBP13.52□□□□□ -0.25
PTBP1-201ENST00000349038 F8VVB4 439 aa13.52□□□□□ -0.25
PTBP1-201ENST00000349038 F8VWA3 439 aa13.52□□□□□ -0.25
PTBP1-201ENST00000349038 TMEM127O75204 238 aa13.52□□□□□ -0.25
PTBP1-201ENST00000349038 IGKV1D-16P01601 117 aa13.52□□□□□ -0.25
PTBP1-201ENST00000349038 CSTBP04080 98 aaKnown RBP13.52□□□□□ -0.25
PTBP1-201ENST00000349038 CSNK2A1P68400 391 aaPredicted RBP13.52□□□□□ -0.25
PTBP1-201ENST00000349038 ZNHIT3Q15649 155 aaPredicted RBP13.52□□□□□ -0.25
PTBP1-201ENST00000349038 ZNF880Q6PDB4 577 aa13.52□□□□□ -0.25
PTBP1-201ENST00000349038 CSNK2A3Q8NEV1 391 aa13.52□□□□□ -0.25
PTBP1-201ENST00000349038 KTI12Q96EK9 354 aaPredicted RBP13.52□□□□□ -0.25
PTBP1-201ENST00000349038 SMIM8Q96KF7 97 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms