RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 A1L4Q6 167 aa16.34■□□□□ 0.21
CHMP4A-201ENST00000347519 CD53P19397 219 aa16.34■□□□□ 0.21
CHMP4A-201ENST00000347519 SOX2P48431 317 aa16.34■□□□□ 0.21
CHMP4A-201ENST00000347519 FAM3AP98173 230 aa16.34■□□□□ 0.21
CHMP4A-201ENST00000347519 SNTB2Q13425 540 aaKnown RBP16.34■□□□□ 0.21
CHMP4A-201ENST00000347519 BEX5Q5H9J7 111 aa16.34■□□□□ 0.21
CHMP4A-201ENST00000347519 SLC16A12Q6ZSM3 486 aa16.34■□□□□ 0.21
CHMP4A-201ENST00000347519 COMMD2Q86X83 199 aa16.34■□□□□ 0.21
CHMP4A-201ENST00000347519 PLPP7Q8NBV4 271 aa16.34■□□□□ 0.21
CHMP4A-201ENST00000347519 KBTBD8Q8NFY9 601 aa16.34■□□□□ 0.21
CHMP4A-201ENST00000347519 OR14K1Q8NGZ2 314 aa16.34■□□□□ 0.21
CHMP4A-201ENST00000347519 NEUROG1Q92886 237 aa16.34■□□□□ 0.21
CHMP4A-201ENST00000347519 ORAI1Q96D31 301 aa16.34■□□□□ 0.21
CHMP4A-201ENST00000347519 REPIN1Q9BWE0 567 aaKnown RBP16.34■□□□□ 0.21
CHMP4A-201ENST00000347519 PPIL3Q9H2H8 161 aaKnown RBP16.34■□□□□ 0.21
CHMP4A-201ENST00000347519 ESRP2Q9H6T0 727 aaKnown RBP16.34■□□□□ 0.21
CHMP4A-201ENST00000347519 RNF167Q9H6Y7 350 aa16.34■□□□□ 0.21
CHMP4A-201ENST00000347519 FZR1Q9UM11 496 aa16.34■□□□□ 0.21
CHMP4A-201ENST00000347519 hCG_38984A0A1B0GV85 526 aa16.33■□□□□ 0.2
CHMP4A-201ENST00000347519 A0A1B0GVI7 797 aa16.33■□□□□ 0.2
CHMP4A-201ENST00000347519 A6NIN4 97 aa16.33■□□□□ 0.2
CHMP4A-201ENST00000347519 SHISA9B4DS77 424 aa16.33■□□□□ 0.2
CHMP4A-201ENST00000347519 GABRPO00591 440 aa16.33■□□□□ 0.2
CHMP4A-201ENST00000347519 CASKO14936 926 aa16.33■□□□□ 0.2
CHMP4A-201ENST00000347519 PIN1P1O15428 100 aa16.33■□□□□ 0.2
CHMP4A-201ENST00000347519 XRCC2O43543 280 aa16.33■□□□□ 0.2
CHMP4A-201ENST00000347519 SYT7O43581 403 aa16.33■□□□□ 0.2
CHMP4A-201ENST00000347519 SC5DO75845 299 aa16.33■□□□□ 0.2
CHMP4A-201ENST00000347519 ACKR3P25106 362 aa16.33■□□□□ 0.2
CHMP4A-201ENST00000347519 MPV17P39210 176 aa16.33■□□□□ 0.2
CHMP4A-201ENST00000347519 ACSM3Q53FZ2 586 aa16.33■□□□□ 0.2
CHMP4A-201ENST00000347519 YIF1BQ5BJH7 314 aa16.33■□□□□ 0.2
CHMP4A-201ENST00000347519 FAM27D1Q5T7N8 215 aa16.33■□□□□ 0.2
CHMP4A-201ENST00000347519 CD200R1LQ6Q8B3 271 aa16.33■□□□□ 0.2
CHMP4A-201ENST00000347519 UNQ9370/PRO34162Q6UXP9 181 aa16.33■□□□□ 0.2
CHMP4A-201ENST00000347519 Q6ZSR3 168 aa16.33■□□□□ 0.2
CHMP4A-201ENST00000347519 CLVS1Q8IUQ0 354 aaPredicted RBP16.33■□□□□ 0.2
CHMP4A-201ENST00000347519 FAM222BQ8WU58 562 aa16.33■□□□□ 0.2
CHMP4A-201ENST00000347519 PIK3IP1Q96FE7 263 aa16.33■□□□□ 0.2
CHMP4A-201ENST00000347519 MARS2Q96GW9 593 aaKnown RBP16.33■□□□□ 0.2
CHMP4A-201ENST00000347519 OR14A2Q96R54 314 aa16.33■□□□□ 0.2
CHMP4A-201ENST00000347519 HHLA2Q9UM44 414 aa16.33■□□□□ 0.2
CHMP4A-201ENST00000347519 CEPT1Q9Y6K0 416 aa16.33■□□□□ 0.2
CHMP4A-201ENST00000347519 A0A1W2PPK0 400 aa16.32■□□□□ 0.2
CHMP4A-201ENST00000347519 RGS9O75916 674 aaPredicted RBP16.32■□□□□ 0.2
CHMP4A-201ENST00000347519 THBS4P35443 961 aa16.32■□□□□ 0.2
CHMP4A-201ENST00000347519 TGFBR1P36897 503 aa16.32■□□□□ 0.2
CHMP4A-201ENST00000347519 RAD52P43351 418 aa16.32■□□□□ 0.2
CHMP4A-201ENST00000347519 GSK3AP49840 483 aa16.32■□□□□ 0.2
CHMP4A-201ENST00000347519 MALLQ13021 153 aa16.32■□□□□ 0.2
CHMP4A-201ENST00000347519 ALKBH6Q3KRA9 238 aa16.32■□□□□ 0.2
CHMP4A-201ENST00000347519 ASPHD2Q6ICH7 369 aa16.32■□□□□ 0.2
CHMP4A-201ENST00000347519 VHLLQ6RSH7 139 aa16.32■□□□□ 0.2
CHMP4A-201ENST00000347519 SLC22A25Q6T423 547 aa16.32■□□□□ 0.2
CHMP4A-201ENST00000347519 DOK3Q7L591 496 aa16.32■□□□□ 0.2
CHMP4A-201ENST00000347519 ANKRD13BQ86YJ7 626 aa16.32■□□□□ 0.2
CHMP4A-201ENST00000347519 MS4A15Q8N5U1 240 aa16.32■□□□□ 0.2
CHMP4A-201ENST00000347519 OR5L1Q8NGL2 311 aa16.32■□□□□ 0.2
CHMP4A-201ENST00000347519 GPR148Q8TDV2 347 aa16.32■□□□□ 0.2
CHMP4A-201ENST00000347519 CMBLQ96DG6 245 aa16.32■□□□□ 0.2
CHMP4A-201ENST00000347519 CHCHD6Q9BRQ6 235 aa16.32■□□□□ 0.2
CHMP4A-201ENST00000347519 RBM38Q9H0Z9 239 aaKnown RBP16.32■□□□□ 0.2
CHMP4A-201ENST00000347519 STUB1Q9UNE7 303 aa16.32■□□□□ 0.2
CHMP4A-201ENST00000347519 ATP23Q9Y6H3 246 aa16.32■□□□□ 0.2
CHMP4A-201ENST00000347519 V9GYS6 101 aa16.32■□□□□ 0.2
CHMP4A-201ENST00000347519 NAV2Q8IVL1 2488 aa16.32■□□□□ 0.2
CHMP4A-201ENST00000347519 MAST4O15021 2626 aa16.32■□□□□ 0.2
CHMP4A-201ENST00000347519 TRDV1A0A1B0GX56 115 aa16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 ANKRD61A6NGH8 418 aa16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 J3QW42 95 aa16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 LILRA1O75019 489 aa16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 CD3EP07766 207 aa16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 GLRXP35754 106 aa16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 PEX19P40855 299 aa16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 LSM3P62310 102 aaKnown RBP16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 FOXB2Q5VYV0 432 aa16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 FBXW12Q6X9E4 464 aa16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 MRPL21Q7Z2W9 205 aaKnown RBP16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 CEACAM19Q7Z692 300 aa16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 LRP11Q86VZ4 500 aa16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 OR13C3Q8NGS6 347 aa16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 LILRB1Q8NHL6 650 aaPredicted RBP16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 KLF14Q8TD94 323 aaPredicted RBP16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 TMEM171Q8WVE6 324 aa16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 TSEN15Q8WW01 171 aaKnown RBP16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 AKAP1Q92667 903 aaKnown RBP eCLIP16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 ADAT3Q96EY9 351 aaPredicted RBP16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 DERL3Q96Q80 235 aa16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 TMEM204Q9BSN7 226 aa16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 CENPOQ9BU64 300 aa16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 BCL2L14Q9BZR8 327 aa16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 RGCCQ9H4X1 137 aa16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 PPP1R3EQ9H7J1 279 aa16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 ENPP5Q9UJA9 477 aa16.31■□□□□ 0.2
CHMP4A-201ENST00000347519 TRBV5-7A0A0A0MS05 114 aa16.3■□□□□ 0.2
CHMP4A-201ENST00000347519 LOC100506127A0A0U1RQW1 187 aa16.3■□□□□ 0.2
CHMP4A-201ENST00000347519 ZNF879B4DU55 563 aa16.3■□□□□ 0.2
CHMP4A-201ENST00000347519 DHRS3O75911 302 aa16.3■□□□□ 0.2
CHMP4A-201ENST00000347519 PSMA1P25786 263 aaKnown RBP16.3■□□□□ 0.2
CHMP4A-201ENST00000347519 FABP6P51161 128 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms