RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 RNF128Q8TEB7 428 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 CCDC107Q8WV48 283 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 ADAM19Q9H013 955 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 OR14J1Q9UGF5 321 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 ACTBP60709 375 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 ACTG1P63261 375 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 IFITM2Q01629 132 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 FHL1Q13642 323 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 METTL11BQ5VVY1 283 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 CLEC9AQ6UXN8 241 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 C6orf201Q7Z4U5 140 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 ADGRE4PQ86SQ3 457 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 MAML2Q8IZL2 1156 aaPredicted RBP11.8□□□□□ -0.52
CASC4-202ENST00000345795 MFSD8Q8NHS3 518 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 ASB10Q8WXI3 467 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 MRGPRX4Q96LA9 322 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 URM1Q9BTM9 101 aaKnown RBP11.8□□□□□ -0.52
CASC4-202ENST00000345795 LSM5Q9Y4Y9 91 aaKnown RBP11.8□□□□□ -0.52
CASC4-202ENST00000345795 ABHD16AO95870 558 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 EXOSC6Q5RKV6 272 aaKnown RBP11.8□□□□□ -0.52
CASC4-202ENST00000345795 LINC00299Q6ZSB3 139 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 IQCF2Q8IXL9 164 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 LILRB4Q8NHJ6 448 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 FAM131CQ96AQ9 280 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 ZBTB8AQ96BR9 441 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 ARHGAP5-AS1Q96IT6 56 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 PIGQQ9BRB3 760 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 HAO2Q9NYQ3 351 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 FOXJ2Q9P0K8 574 aa11.8□□□□□ -0.52
CASC4-202ENST00000345795 CCDC187A0A096LP49 1063 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 F5H5P2 479 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 DHHO43323 396 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 CNOT4O95628 575 aaKnown RBP11.79□□□□□ -0.52
CASC4-202ENST00000345795 IGLV3-19P01714 112 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 APOC3P02656 99 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 EGR3Q06889 387 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 RBMS2Q15434 407 aaKnown RBP11.79□□□□□ -0.52
CASC4-202ENST00000345795 SLC25A24Q6NUK1 477 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 PXKQ7Z7A4 578 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 WDSUB1Q8N9V3 476 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 NOXO1Q8NFA2 376 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 OR2Y1Q8NGV0 311 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 SPTSSAQ969W0 71 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 PNPLA2Q96AD5 504 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 NOTCH2Q04721 2471 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 TRAV1-2A0A0B4J238 106 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 LGALS8O00214 317 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 FBXO24O75426 580 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 ZNF32P17041 273 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 MSR1P21757 451 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 SLC25A1P53007 311 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 IGLV3-21P80748 117 aaPredicted RBP11.79□□□□□ -0.52
CASC4-202ENST00000345795 KMT5CQ86Y97 462 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 MISPQ8IVT2 679 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 INO80EQ8NBZ0 244 aaPredicted RBP11.79□□□□□ -0.52
CASC4-202ENST00000345795 OR2M3Q8NG83 312 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 ST8SIA4Q92187 359 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 ZNF436Q9C0F3 470 aaPredicted RBP11.79□□□□□ -0.52
CASC4-202ENST00000345795 FBXO9Q9UK97 447 aaPredicted RBP11.79□□□□□ -0.52
CASC4-202ENST00000345795 NXT1Q9UKK6 140 aaKnown RBP11.79□□□□□ -0.52
CASC4-202ENST00000345795 HS3ST1O14792 307 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 CAPZA1P52907 286 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 MUC20Q8N307 709 aaPredicted RBP11.79□□□□□ -0.52
CASC4-202ENST00000345795 C12orf45Q8N5I9 185 aaPredicted RBP11.79□□□□□ -0.52
CASC4-202ENST00000345795 OR11H4Q8NGC9 324 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 OR6M1Q8NGM8 313 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 THAP6Q8TBB0 222 aa11.79□□□□□ -0.52
CASC4-202ENST00000345795 MAP1AP78559 2803 aaPredicted RBP11.78□□□□□ -0.52
CASC4-202ENST00000345795 OMGP23515 440 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 IDH3GP51553 393 aaPredicted RBP11.78□□□□□ -0.52
CASC4-202ENST00000345795 EMC4Q5J8M3 183 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 ZNF546Q86UE3 836 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 SLC22A24Q8N4F4 322 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 MARVELD1Q9BSK0 173 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 RANBP3Q9H6Z4 567 aaPredicted RBP11.78□□□□□ -0.52
CASC4-202ENST00000345795 NIPAL2Q9H841 368 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 UFSP2Q9NUQ7 469 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 ZNF629Q9UEG4 869 aaPredicted RBP11.78□□□□□ -0.52
CASC4-202ENST00000345795 OR6C76A6NM76 312 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 SLC17A2O00624 439 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 CSF1P09603 554 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 EPHA1P21709 976 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 ACHEP22303 614 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 SRSF6Q13247 344 aaKnown RBP11.78□□□□□ -0.52
CASC4-202ENST00000345795 TSPO2Q5TGU0 170 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 NLRC3Q7RTR2 1065 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 MRPL21Q7Z2W9 205 aaKnown RBP11.78□□□□□ -0.52
CASC4-202ENST00000345795 PRSS42Q7Z5A4 293 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 RDH5Q92781 318 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 FAM210AQ96ND0 272 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 OXGR1Q96P68 337 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 B4GALT7Q9UBV7 327 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 IGLV1-36A0A0B4J1U3 117 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 A0A0B4J2A0 478 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 IGHV3-13P01766 116 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 IGHV3-7P01780 117 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 ASCL1P50553 236 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 MMP15P51511 669 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 PLP2Q04941 152 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 RIN1Q13671 783 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms