RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 KLRC4-KLRK1H3BQV0 150 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 SULT1C2O00338 296 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 HPNP05981 417 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 SP1P08047 785 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 UBBP0CG47 229 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 UBCP0CG48 685 aaKnown RBP11.35□□□□□ -0.59
CLK3-201ENST00000345005 RPS27P42677 84 aaKnown RBP11.35□□□□□ -0.59
CLK3-201ENST00000345005 CLDN17P56750 224 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 TAS2R20P59543 309 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 RPS27AP62979 156 aaKnown RBP11.35□□□□□ -0.59
CLK3-201ENST00000345005 UBA52P62987 128 aaKnown RBP11.35□□□□□ -0.59
CLK3-201ENST00000345005 SLC17A1Q14916 467 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 RTP5Q14D33 572 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 HIST3H3Q16695 136 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 MEP1BQ16820 701 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 TUSC1Q2TAM9 212 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 LINC00303Q3SY05 128 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 PDSS1Q5T2R2 415 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 FDX2Q6P4F2 183 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 OR10H5Q8NGA6 315 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 OR52H1Q8NGJ2 320 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 OR5M9Q8NGP3 310 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 RNF166Q96A37 237 aaPredicted RBP11.35□□□□□ -0.59
CLK3-201ENST00000345005 SF3B5Q9BWJ5 86 aaKnown RBP11.35□□□□□ -0.59
CLK3-201ENST00000345005 ZNF416Q9BWM5 594 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 OR5V1Q9UGF6 321 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 KCNK7Q9Y2U2 307 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 IGKV1D-43A0A0B4J1Z2 117 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 EIF1AYO14602 144 aaKnown RBP11.35□□□□□ -0.59
CLK3-201ENST00000345005 MPZL1O95297 269 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 AKAIN1P0CW23 69 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 CD46P15529 392 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 KLK2P20151 261 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 POU3F2P20265 443 aaPredicted RBP11.35□□□□□ -0.59
CLK3-201ENST00000345005 CDK2P24941 298 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 LAP3P28838 519 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 GFRA1P56159 465 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 NANOS3P60323 173 aaKnown RBP11.35□□□□□ -0.59
CLK3-201ENST00000345005 RASGEF1BQ0VAM2 473 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 MFAP5Q13361 173 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 BTN1A1Q13410 526 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 LPCAT3Q6P1A2 487 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 STAC2Q6ZMT1 411 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 SLC36A1Q7Z2H8 476 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 GGNQ86UU5 652 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 IZUMO1Q8IYV9 350 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 MDS2Q8NDY4 140 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 OR9K2Q8NGE7 335 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 OR5AK2Q8NH90 309 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 OR2V1Q8NHB1 315 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 HAS2Q92819 552 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 LINC00052Q96N35 136 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 UCN2Q96RP3 112 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 AMELYQ99218 206 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 PDCD1LG2Q9BQ51 273 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 ABHD6Q9BV23 337 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 COMMD4Q9H0A8 199 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 ARL6Q9H0F7 186 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 ZNF703Q9H7S9 590 aaPredicted RBP11.35□□□□□ -0.59
CLK3-201ENST00000345005 ELOVL3Q9HB03 270 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 KLK11Q9UBX7 282 aa11.35□□□□□ -0.59
CLK3-201ENST00000345005 ZNF107Q9UII5 783 aaPredicted RBP11.35□□□□□ -0.59
CLK3-201ENST00000345005 TRBV5-5A0A0J9YX44 114 aa11.34□□□□□ -0.59
CLK3-201ENST00000345005 TTLL8A6PVC2 850 aa11.34□□□□□ -0.59
CLK3-201ENST00000345005 PIN1P1O15428 100 aa11.34□□□□□ -0.59
CLK3-201ENST00000345005 NKX2-8O15522 239 aa11.34□□□□□ -0.59
CLK3-201ENST00000345005 NME2P1O60361 137 aa11.34□□□□□ -0.59
CLK3-201ENST00000345005 ZNF254O75437 659 aa11.34□□□□□ -0.59
CLK3-201ENST00000345005 S100A6P06703 90 aa11.34□□□□□ -0.59
CLK3-201ENST00000345005 NME2P22392 152 aa11.34□□□□□ -0.59
CLK3-201ENST00000345005 RIDAP52758 137 aaKnown RBP11.34□□□□□ -0.59
CLK3-201ENST00000345005 SLC25A47Q6Q0C1 308 aa11.34□□□□□ -0.59
CLK3-201ENST00000345005 TMEM17Q86X19 198 aa11.34□□□□□ -0.59
CLK3-201ENST00000345005 OR2AK2Q8NG84 335 aa11.34□□□□□ -0.59
CLK3-201ENST00000345005 OR2G2Q8NGZ5 317 aa11.34□□□□□ -0.59
CLK3-201ENST00000345005 OR52N5Q8NH56 324 aa11.34□□□□□ -0.59
CLK3-201ENST00000345005 COQ8AQ8NI60 647 aa11.34□□□□□ -0.59
CLK3-201ENST00000345005 RNF128Q8TEB7 428 aa11.34□□□□□ -0.59
CLK3-201ENST00000345005 MCHR2Q969V1 340 aa11.34□□□□□ -0.59
CLK3-201ENST00000345005 DCBLD2Q96PD2 775 aa11.34□□□□□ -0.59
CLK3-201ENST00000345005 SLC25A21Q9BQT8 299 aaPredicted RBP11.34□□□□□ -0.59
CLK3-201ENST00000345005 GINS4Q9BRT9 223 aa11.34□□□□□ -0.59
CLK3-201ENST00000345005 HES7Q9BYE0 225 aa11.34□□□□□ -0.59
CLK3-201ENST00000345005 SRXN1Q9BYN0 137 aa11.34□□□□□ -0.59
CLK3-201ENST00000345005 SLCO5A1Q9H2Y9 848 aa11.34□□□□□ -0.59
CLK3-201ENST00000345005 MYOZ1Q9NP98 299 aaPredicted RBP11.34□□□□□ -0.59
CLK3-201ENST00000345005 MRPL15Q9P015 296 aaKnown RBP11.34□□□□□ -0.59
CLK3-201ENST00000345005 FRRS1LQ9P0K9 344 aa11.34□□□□□ -0.59
CLK3-201ENST00000345005 STEAP1Q9UHE8 339 aa11.34□□□□□ -0.59
CLK3-201ENST00000345005 IGHV3-15A0A0B4J1V0 119 aa11.33□□□□□ -0.6
CLK3-201ENST00000345005 ACOD1A6NK06 481 aa11.33□□□□□ -0.6
CLK3-201ENST00000345005 ZNF98A6NK75 572 aa11.33□□□□□ -0.6
CLK3-201ENST00000345005 TMEM212A6NML5 194 aa11.33□□□□□ -0.6
CLK3-201ENST00000345005 ANXA2P2A6NMY6 339 aa11.33□□□□□ -0.6
CLK3-201ENST00000345005 ZFPL1O95159 310 aa11.33□□□□□ -0.6
CLK3-201ENST00000345005 ANXA2P07355 339 aaKnown RBP11.33□□□□□ -0.6
CLK3-201ENST00000345005 QDPRP09417 244 aa11.33□□□□□ -0.6
CLK3-201ENST00000345005 MGMTP16455 207 aa11.33□□□□□ -0.6
CLK3-201ENST00000345005 ANXA7P20073 488 aaKnown RBP11.33□□□□□ -0.6
CLK3-201ENST00000345005 ACTBP60709 375 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms