RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 KIRREL2Q6UWL6 708 aa16.33■□□□□ 0.21
SMC4-201ENST00000344722 INTS12Q96CB8 462 aaKnown RBP16.33■□□□□ 0.21
SMC4-201ENST00000344722 SPACA5Q96QH8 159 aa16.33■□□□□ 0.21
SMC4-201ENST00000344722 J3QR89 54 aa16.33■□□□□ 0.2
SMC4-201ENST00000344722 CST2P09228 141 aa16.33■□□□□ 0.2
SMC4-201ENST00000344722 SPANXN5Q5MJ07 72 aa16.33■□□□□ 0.2
SMC4-201ENST00000344722 ETFBKMTQ8IXQ9 262 aa16.33■□□□□ 0.2
SMC4-201ENST00000344722 NXPE3Q969Y0 559 aa16.33■□□□□ 0.2
SMC4-201ENST00000344722 A0A0B4J2E0 115 aa16.33■□□□□ 0.2
SMC4-201ENST00000344722 A0A1B0GX12 115 aa16.33■□□□□ 0.2
SMC4-201ENST00000344722 AKR7A3O95154 331 aa16.33■□□□□ 0.2
SMC4-201ENST00000344722 ZNF574Q6ZN55 896 aaPredicted RBP16.33■□□□□ 0.2
SMC4-201ENST00000344722 LHFPL2Q6ZUX7 228 aa16.33■□□□□ 0.2
SMC4-201ENST00000344722 OR2AE1Q8NHA4 323 aa16.33■□□□□ 0.2
SMC4-201ENST00000344722 OR51B6Q9H340 312 aa16.33■□□□□ 0.2
SMC4-201ENST00000344722 MTCH1Q9NZJ7 389 aa16.33■□□□□ 0.2
SMC4-201ENST00000344722 DNMT3BQ9UBC3 853 aaKnown RBP16.33■□□□□ 0.2
SMC4-201ENST00000344722 TNRC6CQ9HCJ0 1690 aaKnown RBP16.33■□□□□ 0.2
SMC4-201ENST00000344722 MFSD2BA6NFX1 497 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 MRPL33O75394 65 aaKnown RBP16.32■□□□□ 0.2
SMC4-201ENST00000344722 KRTDAPP60985 99 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 PKIAP61925 76 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 ZNF345Q14585 488 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 SLC24A4Q8NFF2 622 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 STRADBQ9C0K7 418 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 R3HDMLQ9H3Y0 253 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 SLCO1B1Q9Y6L6 691 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 DRD1P21728 446 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 GZMMP51124 257 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 Q7L0L9 218 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 S100A7AQ86SG5 101 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 ZNF383Q8NA42 475 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 GAS2L1Q99501 681 aaPredicted RBP16.32■□□□□ 0.2
SMC4-201ENST00000344722 ING1Q9UK53 422 aaPredicted RBP16.32■□□□□ 0.2
SMC4-201ENST00000344722 CCL27Q9Y4X3 112 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 TRAPPC1Q9Y5R8 145 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 NRAPQ86VF7 1730 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 TRPM3Q9HCF6 1732 aaPredicted RBP16.32■□□□□ 0.2
SMC4-201ENST00000344722 PPP1CBP62140 327 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 TMEM183BQ1AE95 376 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 DEFB133Q30KQ1 61 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 FAM209BQ5JX69 171 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 CMBLQ96DG6 245 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 GHITMQ9H3K2 345 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 RASL12Q9NYN1 266 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 NHSQ6T4R5 1651 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 H0Y8G0 127 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 RAB30Q15771 203 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 ARSGQ96EG1 525 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 PSENENQ9NZ42 101 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 SSC5DA1L4H1 1573 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 FER1L6Q2WGJ9 1857 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 OGG1O15527 345 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 OPRM1P35372 400 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 FOXK1P85037 733 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 CLEC12BQ2HXU8 276 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 H2BFWTQ7Z2G1 175 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 PPP1R3BQ86XI6 285 aa16.32■□□□□ 0.2
SMC4-201ENST00000344722 PWWP2BQ6NUJ5 590 aa16.31■□□□□ 0.2
SMC4-201ENST00000344722 OR10P1Q8NGE3 313 aa16.31■□□□□ 0.2
SMC4-201ENST00000344722 PINX1Q96BK5 328 aaKnown RBP16.31■□□□□ 0.2
SMC4-201ENST00000344722 WDR34Q96EX3 536 aa16.31■□□□□ 0.2
SMC4-201ENST00000344722 OBP2BQ9NPH6 170 aa16.31■□□□□ 0.2
SMC4-201ENST00000344722 DLEC1Q9Y238 1755 aa16.31■□□□□ 0.2
SMC4-201ENST00000344722 IGLV3-16A0A075B6K0 115 aa16.31■□□□□ 0.2
SMC4-201ENST00000344722 ZNF749O43361 778 aa16.31■□□□□ 0.2
SMC4-201ENST00000344722 LANCL1O43813 399 aa16.31■□□□□ 0.2
SMC4-201ENST00000344722 NMBP08949 121 aa16.31■□□□□ 0.2
SMC4-201ENST00000344722 FAM109BQ6ICB4 259 aaPredicted RBP16.31■□□□□ 0.2
SMC4-201ENST00000344722 SLC25A43Q8WUT9 341 aaPredicted RBP16.31■□□□□ 0.2
SMC4-201ENST00000344722 MAGT1Q9H0U3 335 aa16.31■□□□□ 0.2
SMC4-201ENST00000344722 RPH3ALQ9UNE2 315 aa16.31■□□□□ 0.2
SMC4-201ENST00000344722 A0A087WUJ7 227 aa16.31■□□□□ 0.2
SMC4-201ENST00000344722 ANKUB1A6NFN9 424 aa16.31■□□□□ 0.2
SMC4-201ENST00000344722 M0QZK8 103 aa16.31■□□□□ 0.2
SMC4-201ENST00000344722 MFNGO00587 321 aa16.31■□□□□ 0.2
SMC4-201ENST00000344722 GGCTO75223 188 aaKnown RBP16.31■□□□□ 0.2
SMC4-201ENST00000344722 MMP7P09237 267 aaPredicted RBP16.31■□□□□ 0.2
SMC4-201ENST00000344722 FKBP2P26885 142 aaKnown RBP16.31■□□□□ 0.2
SMC4-201ENST00000344722 MRPL58Q14197 206 aaKnown RBP16.31■□□□□ 0.2
SMC4-201ENST00000344722 SLC10A1Q14973 349 aa16.31■□□□□ 0.2
SMC4-201ENST00000344722 WDR38Q5JTN6 314 aa16.31■□□□□ 0.2
SMC4-201ENST00000344722 LMAN1LQ9HAT1 526 aa16.31■□□□□ 0.2
SMC4-201ENST00000344722 GP1BAP07359 652 aa16.31■□□□□ 0.2
SMC4-201ENST00000344722 NPBWR1P48145 328 aa16.31■□□□□ 0.2
SMC4-201ENST00000344722 KDF1Q8NAX2 398 aaPredicted RBP16.31■□□□□ 0.2
SMC4-201ENST00000344722 OR4N2Q8NGD1 307 aa16.31■□□□□ 0.2
SMC4-201ENST00000344722 C20orf141Q9NUB4 165 aa16.31■□□□□ 0.2
SMC4-201ENST00000344722 C7orf77A4D0Y5 90 aa16.3■□□□□ 0.2
SMC4-201ENST00000344722 ABHD16AO95870 558 aa16.3■□□□□ 0.2
SMC4-201ENST00000344722 OTX2P32243 289 aa16.3■□□□□ 0.2
SMC4-201ENST00000344722 CD200P41217 278 aa16.3■□□□□ 0.2
SMC4-201ENST00000344722 TIAL1Q01085 375 aaKnown RBP eCLIP16.3■□□□□ 0.2
SMC4-201ENST00000344722 CA13Q8N1Q1 262 aa16.3■□□□□ 0.2
SMC4-201ENST00000344722 WBP2Q969T9 261 aa16.3■□□□□ 0.2
SMC4-201ENST00000344722 C4orf45Q96LM5 186 aa16.3■□□□□ 0.2
SMC4-201ENST00000344722 MRPS18AQ9NVS2 196 aaKnown RBP16.3■□□□□ 0.2
SMC4-201ENST00000344722 GALR1P47211 349 aa16.3■□□□□ 0.2
SMC4-201ENST00000344722 LBHQ53QV2 105 aaPredicted RBP16.3■□□□□ 0.2
SMC4-201ENST00000344722 OR51F2Q8NH61 342 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms