RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 MSRB2Q9Y3D2 182 aa11.82□□□□□ -0.52
CDC42-202ENST00000344548 A0A0U1RQV5 110 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 CIB4A0PJX0 185 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 LDLRAD4O15165 306 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 CTAG2O75638 210 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 LCATP04180 440 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 EDN3P14138 238 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 UBE2V2Q15819 145 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 ZNF57Q68EA5 555 aaPredicted RBP11.81□□□□□ -0.52
CDC42-202ENST00000344548 DRAM2Q6UX65 266 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 RTN4RL2Q86UN3 420 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 ZNF584Q8IVC4 421 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 PAQR4Q8N4S7 273 aaPredicted RBP11.81□□□□□ -0.52
CDC42-202ENST00000344548 C19orf18Q8NEA5 215 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 EXTL1Q92935 676 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 S100A16Q96FQ6 103 aaKnown RBP11.81□□□□□ -0.52
CDC42-202ENST00000344548 MS4A3Q96HJ5 214 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 CMTM3Q96MX0 182 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 NEURL2Q9BR09 285 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 KLK11Q9UBX7 282 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 ELF5Q9UKW6 265 aaPredicted RBP11.81□□□□□ -0.52
CDC42-202ENST00000344548 ZNF175Q9Y473 711 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 V9GYS6 101 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 LOC100289279A0A1B0GTE1 492 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 WIPF3A6NGB9 483 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 FARS2O95363 451 aaKnown RBP11.81□□□□□ -0.52
CDC42-202ENST00000344548 ARSBP15848 533 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 ZNF20P17024 532 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 RAB3AP20336 220 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 TPTEP56180 551 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 GUSBP1Q15486 140 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 TSC22D1Q15714 1073 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 MOGAT2Q3SYC2 334 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 FBXW9Q5XUX1 488 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 VWA1Q6PCB0 445 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 SEM1Q6ZVN7 128 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 P4HA3Q7Z4N8 544 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 RPRMLQ8N4K4 120 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 OR52I2Q8NH67 350 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 GMPPAQ96IJ6 420 aaPredicted RBP11.81□□□□□ -0.52
CDC42-202ENST00000344548 RNF121Q9H920 327 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 MRPL15Q9P015 296 aaKnown RBP11.81□□□□□ -0.52
CDC42-202ENST00000344548 ETV7Q9Y603 341 aa11.81□□□□□ -0.52
CDC42-202ENST00000344548 ARPC4-TTLL3A0A0A6YYG9 625 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 A0A1W2PR80 420 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 LYRM1O43325 122 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 SULT1B1O43704 296 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 SS18L1O75177 396 aaPredicted RBP11.8□□□□□ -0.52
CDC42-202ENST00000344548 DHRS3O75911 302 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 CD79AP11912 226 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 OR3A2P47893 321 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 TAS2R20P59543 309 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 NRN1LQ496H8 165 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 TMEM69Q5SWH9 247 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 OR6M1Q8NGM8 313 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 TBCCD1Q9NVR7 557 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 PIGLQ9Y2B2 252 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 TP53TG5Q9Y2B4 290 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 RP1L1Q8IWN7 2480 aaPredicted RBP11.8□□□□□ -0.52
CDC42-202ENST00000344548 INTS1Q8N201 2190 aaKnown RBP11.8□□□□□ -0.52
CDC42-202ENST00000344548 A0A1W2PP11 408 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 MEGF11A6BM72 1044 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 ORC5O43913 435 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 CCNOP22674 350 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 BTCP35070 178 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 KIR2DL2P43627 348 aaPredicted RBP11.8□□□□□ -0.52
CDC42-202ENST00000344548 OR3A4PP47883 348 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 PCBD1P61457 104 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 RAB1AP62820 205 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 ZNF92Q03936 586 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 UNC119Q13432 240 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 GPR176Q14439 515 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 ZNF585AQ6P3V2 769 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 ANKRD16Q6P6B7 361 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 TFAP2EQ6VUC0 442 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 Q6ZSR3 168 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 KRT74Q7RTS7 529 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 C1QL2Q7Z5L3 287 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 SSC4DQ8WTU2 575 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 RAB40AQ8WXH6 277 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 ITFG2Q969R8 447 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 FAM46BQ96A09 425 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 REEP6Q96HR9 211 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 MRI1Q9BV20 369 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 PLEKHA1Q9HB21 404 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 ZNF71Q9NQZ8 489 aaPredicted RBP11.8□□□□□ -0.52
CDC42-202ENST00000344548 NLKQ9UBE8 527 aa11.8□□□□□ -0.52
CDC42-202ENST00000344548 A0A0B4J293 547 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 OR6C65A6NJZ3 312 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 TMEM127O75204 238 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 ZNF93P35789 620 aaPredicted RBP11.79□□□□□ -0.52
CDC42-202ENST00000344548 NR4A2P43354 598 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 MAP2K3P46734 347 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 QRFPP83859 136 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 GUCA2AQ02747 115 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 ECH1Q13011 328 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 ACSF3Q4G176 576 aaPredicted RBP11.79□□□□□ -0.52
CDC42-202ENST00000344548 TMEM255AQ5JRV8 349 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 C3P1Q6ZMU1 363 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 FAM214BQ7L5A3 538 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms